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Tan0017233 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGAGGATTCATTTTCTGAGATTTATGGAAAAAGAAAGGGGAGAGAGAGAGAAAGAGACATAGAAGGAAGAAAGGTAAAATGTTCAAAAGAAATTAAATGAAGAGGGAAGGTGTCACATTTCCCACCTATAAAACCACATGACTGGCTAGCCTACCACCCACTACAGTTTTGTTTCAAGGAAGAAATCCCTTAAACATGAGCACTGAGGAAACCATTGTTCCAGCTGATAAGTACAGAGTCTTCTTGCATTTAGAGCCTCCTACTATTCACTGGAGGCATGGCAAGCCTCCATCTTATGAAGCTGTTAACCACCTCTTTGAACATGGTAGAACCAAGGTTCTTTTTTCTAACACTTTTTTTAATTTACTTTCCTTTCTCTTTCTCTCTCAAGGTCAACAATTGTAATTGGTGTCTTATTCAATAAGAGCTATGCAGTTCTGGCTGGGGTTTTTCACTTTGCTTTCATCTCTCTTTCTCAAGTCTTTGTTTTGTTTATGGTATTAGGAGTGGCCAAAAGGATCCCTGGAAGAAACAGTGCAAAATGCTATAAAATCATGGGAAATGGAGCTTTCCCACAAAACTAAATTACAGGATTTCAACACCATAAACCATGACAAGTTCAAGCTTTTTGTCAATGGTAAGTACTTTTTCTGTTTCTTTGTTACATATAATATATATATGTCATGTAACTAAATTCAAGAGAGAGAAAAAAAAAAAAAAAAGGTAAAGAAAACACTGAATGACTGACAGATACATGCATATGAAAAAAAGTCTCTCCACTAACCAACCAACTTAAAGAGATGTTACTCCTTGATAAATGGTGGACCATGGGGATTCATAACAATAGAAATCTCTTTATTATCAAGTAACAGATCTTTCAATAATCCATTTAAACAAAGTCATGTGGGAGACACAAGCATATGTAAGATTTCCATTCAAGTTCAAATCTCCAACACAAACAACTTTGGAGATCATTTTTTTTCTTGTTCAAATCGCCCCCCCACAAAAGGGGCTCTCGACATCAATTTATAACTTGTTAATTATAATGGGGAATGTTGAATGTCGTTTTAAAAGAGTCTTAAAATTCCTTTTGGATGTCCATGAATGTTCACGGTAGCTTACCTGCAACCCCCAATCAAAAAATTAGTCTTAACAAGAAATTTCTAGATCTAATGTCACATTCAGTAAAGATTTATGATATATGTATAGGGTGTACTCAATGTATCCGTGCTTGCCTCACAGATGTATTTTCATGATAGATCTAACCCGCAGTGCCTAACCCTACAACACTTGAACAATTCTTAAATCATAATTCGGAAGGGATGACATTACAGCTACCCTAATAATAGTTCATGGAAGGTACTAATTCATATATAAACTCAATTTTCTATCTGGTATGTAGGAAGAGAAGGGTTGTCAGGAGAAGAAACACTGAGACTTGGAAGCTACAATGCATTGCTGAAGAGTTCTCTACCAGAGGAGTTTCAGTATTACAAGGCAGACAAAGAGACGTTTGAATCATCTCATGAAGCATTTAGGACTTGCTTTCCAAGAGGATTTGCATGGGAAGTTATAGAGGTTTATTCAGGTCCTCCTTTGATTGCCTACAAGTTCAGGCATTGGGGTTTCTTTGAAGGACCTTACAAAGGCCACTCCCCAACTGGTGAATTGGTTCAATTCTATGGATTGGGAACTCTCAAGGTAAAGTTGAGATATATCTAAACCTACCTTATTAAGTGCATTTCTATATATCATATTTGAATCACCATAAATGACCAAACATTGAACATGGCATCTAATCAAAATAGTCAATACATTTAGTGCCTAGAGGTCCTTATAAATTAGTTTTCTCAGTTGAAACACCTTGTAAAGTGTGGATGCTTCAAAAACATTCTAAGAGAACTTACAAAGGTTGATATTTGGACAGGTAGATGAATCACTGAAGGTTGAAGAAGCTCATATATACTATGATCCAGCAGAGCTATTTGGAGGTCTTTTGAAGGGGAAAACTAAAAGTGCCTCAGAATCCCAAAACAATGAGAAAGATTCAGCTGCTTCAGTTGGCTGCCCATTCTTCAAACCCAAGGAGTAGTCAAAAGAAAGTTGGTCTGACTCTGAAATAAGTTCTGAAACCTTCAATAATTTCTATGTCTATGTCTATCCTTTCTATCTATGTCTATGTCTATCCTATCTAGGGACATCTCTACCTTATCTTTCTCGCACTTAGATACAAATTCCTAATACAAATTCCTAGGCTTTCAGTTATCTGCATCAAATAACACAGCCACATATGTCTCAGACATCAAAGCATTATCTATTTTGCTCAGCTTTTCTACTTCTAATGATGAATTTCTCGAGA GTTGAGGATTCATTTTCTGAGATTTATGGAAAAAGAAAGGGGAGAGAGAGAGAAAGAGACATAGAAGGAAGAAAGGTAAAATGTTCAAAAGAAATTAAATGAAGAGGGAAGGTGTCACATTTCCCACCTATAAAACCACATGACTGGCTAGCCTACCACCCACTACAGTTTTGTTTCAAGGAAGAAATCCCTTAAACATGAGCACTGAGGAAACCATTGTTCCAGCTGATAAGTACAGAGTCTTCTTGCATTTAGAGCCTCCTACTATTCACTGGAGGCATGGCAAGCCTCCATCTTATGAAGCTGTTAACCACCTCTTTGAACATGGTAGAACCAAGGAGTGGCCAAAAGGATCCCTGGAAGAAACAGTGCAAAATGCTATAAAATCATGGGAAATGGAGCTTTCCCACAAAACTAAATTACAGGATTTCAACACCATAAACCATGACAAGTTCAAGCTTTTTGTCAATGGAAGAGAAGGGTTGTCAGGAGAAGAAACACTGAGACTTGGAAGCTACAATGCATTGCTGAAGAGTTCTCTACCAGAGGAGTTTCAGTATTACAAGGCAGACAAAGAGACGTTTGAATCATCTCATGAAGCATTTAGGACTTGCTTTCCAAGAGGATTTGCATGGGAAGTTATAGAGGTTTATTCAGGTCCTCCTTTGATTGCCTACAAGTTCAGGCATTGGGGTTTCTTTGAAGGACCTTACAAAGGCCACTCCCCAACTGGTGAATTGGTTCAATTCTATGGATTGGGAACTCTCAAGGTAGATGAATCACTGAAGGTTGAAGAAGCTCATATATACTATGATCCAGCAGAGCTATTTGGAGGTCTTTTGAAGGGGAAAACTAAAAGTGCCTCAGAATCCCAAAACAATGAGAAAGATTCAGCTGCTTCAGTTGGCTGCCCATTCTTCAAACCCAAGGAGTAGTCAAAAGAAAGTTGGTCTGACTCTGAAATAAGTTCTGAAACCTTCAATAATTTCTATGTCTATGTCTATCCTTTCTATCTATGTCTATGTCTATCCTATCTAGGGACATCTCTACCTTATCTTTCTCGCACTTAGATACAAATTCCTAATACAAATTCCTAGGCTTTCAGTTATCTGCATCAAATAACACAGCCACATATGTCTCAGACATCAAAGCATTATCTATTTTGCTCAGCTTTTCTACTTCTAATGATGAATTTCTCGAGA ATGAGCACTGAGGAAACCATTGTTCCAGCTGATAAGTACAGAGTCTTCTTGCATTTAGAGCCTCCTACTATTCACTGGAGGCATGGCAAGCCTCCATCTTATGAAGCTGTTAACCACCTCTTTGAACATGGTAGAACCAAGGAGTGGCCAAAAGGATCCCTGGAAGAAACAGTGCAAAATGCTATAAAATCATGGGAAATGGAGCTTTCCCACAAAACTAAATTACAGGATTTCAACACCATAAACCATGACAAGTTCAAGCTTTTTGTCAATGGAAGAGAAGGGTTGTCAGGAGAAGAAACACTGAGACTTGGAAGCTACAATGCATTGCTGAAGAGTTCTCTACCAGAGGAGTTTCAGTATTACAAGGCAGACAAAGAGACGTTTGAATCATCTCATGAAGCATTTAGGACTTGCTTTCCAAGAGGATTTGCATGGGAAGTTATAGAGGTTTATTCAGGTCCTCCTTTGATTGCCTACAAGTTCAGGCATTGGGGTTTCTTTGAAGGACCTTACAAAGGCCACTCCCCAACTGGTGAATTGGTTCAATTCTATGGATTGGGAACTCTCAAGGTAGATGAATCACTGAAGGTTGAAGAAGCTCATATATACTATGATCCAGCAGAGCTATTTGGAGGTCTTTTGAAGGGGAAAACTAAAAGTGCCTCAGAATCCCAAAACAATGAGAAAGATTCAGCTGCTTCAGTTGGCTGCCCATTCTTCAAACCCAAGGAGTAG MSTEETIVPADKYRVFLHLEPPTIHWRHGKPPSYEAVNHLFEHGRTKEWPKGSLEETVQNAIKSWEMELSHKTKLQDFNTINHDKFKLFVNGREGLSGEETLRLGSYNALLKSSLPEEFQYYKADKETFESSHEAFRTCFPRGFAWEVIEVYSGPPLIAYKFRHWGFFEGPYKGHSPTGELVQFYGLGTLKVDESLKVEEAHIYYDPAELFGGLLKGKTKSASESQNNEKDSAASVGCPFFKPKE Homology
BLAST of Tan0017233 vs. ExPASy Swiss-Prot
Match: P16273 (Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2) HSP 1 Score: 215.7 bits (548), Expect = 5.8e-55 Identity = 108/236 (45.76%), Postives = 143/236 (60.59%), Query Frame = 0
BLAST of Tan0017233 vs. NCBI nr
Match: XP_023516553.1 (pathogen-related protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124 Identity = 218/246 (88.62%), Postives = 227/246 (92.28%), Query Frame = 0
BLAST of Tan0017233 vs. NCBI nr
Match: XP_022942368.1 (pathogen-related protein [Cucurbita moschata] >KAG6600504.1 hypothetical protein SDJN03_05737, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 450.3 bits (1157), Expect = 1.1e-122 Identity = 214/245 (87.35%), Postives = 228/245 (93.06%), Query Frame = 0
BLAST of Tan0017233 vs. NCBI nr
Match: XP_022982433.1 (pathogen-related protein-like [Cucurbita maxima]) HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-122 Identity = 214/245 (87.35%), Postives = 228/245 (93.06%), Query Frame = 0
BLAST of Tan0017233 vs. NCBI nr
Match: XP_022142928.1 (pathogen-related protein-like [Momordica charantia]) HSP 1 Score: 444.9 bits (1143), Expect = 4.5e-121 Identity = 208/235 (88.51%), Postives = 222/235 (94.47%), Query Frame = 0
BLAST of Tan0017233 vs. NCBI nr
Match: XP_038901133.1 (pathogen-related protein-like [Benincasa hispida]) HSP 1 Score: 437.6 bits (1124), Expect = 7.2e-119 Identity = 206/242 (85.12%), Postives = 222/242 (91.74%), Query Frame = 0
BLAST of Tan0017233 vs. ExPASy TrEMBL
Match: A0A6J1FUM9 (pathogen-related protein OS=Cucurbita moschata OX=3662 GN=LOC111447433 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 5.2e-123 Identity = 214/245 (87.35%), Postives = 228/245 (93.06%), Query Frame = 0
BLAST of Tan0017233 vs. ExPASy TrEMBL
Match: A0A6J1J4T6 (pathogen-related protein-like OS=Cucurbita maxima OX=3661 GN=LOC111481259 PE=4 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 8.9e-123 Identity = 214/245 (87.35%), Postives = 228/245 (93.06%), Query Frame = 0
BLAST of Tan0017233 vs. ExPASy TrEMBL
Match: A0A6J1CPH1 (pathogen-related protein-like OS=Momordica charantia OX=3673 GN=LOC111012921 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 2.2e-121 Identity = 208/235 (88.51%), Postives = 222/235 (94.47%), Query Frame = 0
BLAST of Tan0017233 vs. ExPASy TrEMBL
Match: A0A1S3BS69 (pathogen-related protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492949 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 5.2e-115 Identity = 204/247 (82.59%), Postives = 220/247 (89.07%), Query Frame = 0
BLAST of Tan0017233 vs. ExPASy TrEMBL
Match: A0A5A7VBJ0 (Pathogen-related protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00620 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 5.2e-115 Identity = 204/247 (82.59%), Postives = 220/247 (89.07%), Query Frame = 0
BLAST of Tan0017233 vs. TAIR 10
Match: AT1G78780.2 (pathogenesis-related family protein ) HSP 1 Score: 340.1 bits (871), Expect = 1.5e-93 Identity = 157/230 (68.26%), Postives = 188/230 (81.74%), Query Frame = 0
BLAST of Tan0017233 vs. TAIR 10
Match: AT1G78780.4 (pathogenesis-related family protein ) HSP 1 Score: 328.6 bits (841), Expect = 4.4e-90 Identity = 154/230 (66.96%), Postives = 185/230 (80.43%), Query Frame = 0
BLAST of Tan0017233 vs. TAIR 10
Match: AT1G78780.1 (pathogenesis-related family protein ) HSP 1 Score: 269.2 bits (687), Expect = 3.2e-72 Identity = 123/174 (70.69%), Postives = 147/174 (84.48%), Query Frame = 0
BLAST of Tan0017233 vs. TAIR 10
Match: AT1G78780.3 (pathogenesis-related family protein ) HSP 1 Score: 269.2 bits (687), Expect = 3.2e-72 Identity = 123/174 (70.69%), Postives = 147/174 (84.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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