Tan0017230 (gene) Snake gourd v1

Overview


Name	Tan0017230
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag-pro-like protein
Location	LG11: 27178677 .. 27180594 (-)
RNA-Seq Expression	Tan0017230
Synteny	Tan0017230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATCAAGTGAACGACCAGGTACAAGCAGTCCGCCTAGACGTGGAAGAATTGAAAGAACAAGTAGCAAAAATCTTGGAGCTTCTTACCGCAAGAAAGGAAAAGTCTGTAGCAGGAACGTCGTTGCAAGCTGAGATAGGTCAAAACCAAGGGCTAGATGACACTCCTTTTTACCCTCCAGGGTTTACGCCGCCAATGGTGTCAAACCCACACATGGCTGGGGTAGCTTATCCAACCTCTTTCCCTGTGCAAGATCCTGGTCGAGCTCCGCAGCAGACCAATCATGTGAGTGATCCAGTATTTGTTCCAACCGTAGAAAATCATAAAAAGACTTCCGAAGATTTGTTAGGAAAAGGAAGGTTGGAGTTCCTTGAGGAAAGACTACGCGCGATTGAGGGTGCCGACGTCTATGGGGATATCTATGCTAGCCAACTATGTTTGATTCGAGATGTTGTTATTCCCCCAAAGTTCAAGACACCAGAGTTTGAGAAGTATAATGGGACTACATGTCCAAAGAGTCATTTGGTCATGTATTGTAGGAAACTGTCGGTCTATGCACACGATGATAAGTTATTGATTCACAGTTTTTAAGACAGCCTGACTGGCCTAGCGTCCCGTTGGTATATGCATTTGGATGGCTCCCAAGTGCACAAGTGGAAAGACTTGGCTGATGCTTTTTTAAAACAGTATAAGTACAATATTGACATGGCACCCGATCGTTTAGATCTTCAGCGAATGGAAAAGAAGGCTACCGAGACTTTTAAGGAGTATGCACAAAGATGGAGAGAATTGGCTACTCAAGTACAACCTCCTTTAACTGACAAAGAATTGTCAGCCATGTTTATCAATACTCTGTGAGCGCCATATTATGACAGGATGATCGGAAGTGCGTCCACAAATTTTTCTGACATCATGACAATCGGAGAAAGGATAGAGTATGGAGTTAAGAATCGGAGGATTACAGACGCAACACCTGAGGAAAATCTGAGAAAGGTAATGACTCCTAAGAAGAAGGAGGGAGAGGTCCACGAGGTAAGCTCAGGACCAAGAGTTGACCCATATGACTTCACCAACTCAAAGACCTGCGAGTTATAATCGTAGTCCTCAGCTTGGAGGGCAAAGTCAACCGAATCAGTCAAATCAGCGTGTTGCTAGTTGCAATTGGAAACAAATGCGTTTTAATCCCATTCCCATGACGTATACAGAGCTTTTGCCTCAATTACTAAAAAATCATCAAGTTGCCATTGTGCCTTAAGAGCCACTACAATCCCCGTATCCTAAATGGTACGATCCAAGCGCGCGGTGTGGATATCATGCAGGGGCAATTGGACATTCCACAGAGAATTGTTATCCATTAAACGCTAAGGTACAAAGTTTGGTTAAAGCAGGATGGTTAAAACTCAAGAAAGCAGGGGAAGGGCTTCATGTTAATCAAAATCCTCTCACAAACCATGAAAATCCTAGTGTGAATGTCATTGAAGTGTCTGAAGAATGTTATAAAGATAAAGTCCAAAATTTGGATACATCTATAAAGATTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTCAGTAGGGTCTGAACAGAGTAGCATAGATGACTTGGGCTTACATAATGAGGAAAGATGCATTTTTCATAGAGGAATGGTCGGACATTCCATAGAAGACTGTGATGATTTTAAGCAACATGTGCAAAAATTAATGGATTCAAAGTTACTGATTGTGAGCCACACAACTACACAGGAGATGAATGTTGACATGATTACTCACGCGTCGTCCTCTAAGAAAACGATAGGAGAAGTGCCATCTTCACCAAAACCATTAATCATTCACTATAAGAGTAATCCAGGTACCATTTCTCATTTTCAAGTACCCAAGCAAATGATTGTAGAAGTGTCGTCCCTTTGCTTATAA

mRNA sequence

ATGGATGATCAAGTGAACGACCAGGTACAAGCAGTCCGCCTAGACGTGGAAGAATTGAAAGAACAAGTAGCAAAAATCTTGGAGCTTCTTACCGCAAGAAAGGAAAAGTCTGTAGCAGGAACGTCGTTGCAAGCTGAGATAGGTCAAAACCAAGGGCTAGATGACACTCCTTTTTACCCTCCAGGGTTTACGCCGCCAATGGTGTCAAACCCACACATGGCTGGGGTAGCTTATCCAACCTCTTTCCCTGTGCAAGATCCTGGTCGAGCTCCGCAGCAGACCAATCATGGTGCCGACGTCTATGGGGATATCTATGCTAGCCAACTATGTTTGATTCGAGATGTTGTTATTCCCCCAAAGTTCAAGACACCAGAGTTTGAGAAGTATAATGGGACTACATTGTCTGAAGAATGTTATAAAGATAAAGTCCAAAATTTGGATACATCTATAAAGATTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTCAGTAGGGTCTGAACAGAGTAGCATAGATGACTTGGGCTTACATAATGAGGAAAGATGCATTTTTCATAGAGGAATGGTCGGACATTCCATAGAAGACTGTGATGATTTTAAGCAACATGTGCAAAAATTAATGGATTCAAAGTTACTGATTGTGAGCCACACAACTACACAGGAGATGAATGTTGACATGATTACTCACGCGTCGTCCTCTAAGAAAACGATAGGAGAAGTGCCATCTTCACCAAAACCATTAATCATTCACTATAAGAGTAATCCAGGTACCATTTCTCATTTTCAAGTACCCAAGCAAATGATTGTAGAAGTGTCGTCCCTTTGCTTATAA

Coding sequence (CDS)

ATGGATGATCAAGTGAACGACCAGGTACAAGCAGTCCGCCTAGACGTGGAAGAATTGAAAGAACAAGTAGCAAAAATCTTGGAGCTTCTTACCGCAAGAAAGGAAAAGTCTGTAGCAGGAACGTCGTTGCAAGCTGAGATAGGTCAAAACCAAGGGCTAGATGACACTCCTTTTTACCCTCCAGGGTTTACGCCGCCAATGGTGTCAAACCCACACATGGCTGGGGTAGCTTATCCAACCTCTTTCCCTGTGCAAGATCCTGGTCGAGCTCCGCAGCAGACCAATCATGGTGCCGACGTCTATGGGGATATCTATGCTAGCCAACTATGTTTGATTCGAGATGTTGTTATTCCCCCAAAGTTCAAGACACCAGAGTTTGAGAAGTATAATGGGACTACATTGTCTGAAGAATGTTATAAAGATAAAGTCCAAAATTTGGATACATCTATAAAGATTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTCAGTAGGGTCTGAACAGAGTAGCATAGATGACTTGGGCTTACATAATGAGGAAAGATGCATTTTTCATAGAGGAATGGTCGGACATTCCATAGAAGACTGTGATGATTTTAAGCAACATGTGCAAAAATTAATGGATTCAAAGTTACTGATTGTGAGCCACACAACTACACAGGAGATGAATGTTGACATGATTACTCACGCGTCGTCCTCTAAGAAAACGATAGGAGAAGTGCCATCTTCACCAAAACCATTAATCATTCACTATAAGAGTAATCCAGGTACCATTTCTCATTTTCAAGTACCCAAGCAAATGATTGTAGAAGTGTCGTCCCTTTGCTTATAA

Protein sequence

MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYPPGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNHGADVYGDIYASQLCLIRDVVIPPKFKTPEFEKYNGTTLSEECYKDKVQNLDTSIKILFQILCDVGYLSVGSEQSSIDDLGLHNEERCIFHRGMVGHSIEDCDDFKQHVQKLMDSKLLIVSHTTTQEMNVDMITHASSSKKTIGEVPSSPKPLIIHYKSNPGTISHFQVPKQMIVEVSSLCL

Homology

[Close]

BLAST of Tan0017230 vs. NCBI nr
Match: KAA0046607.1 (Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-35
Identity = 89/170 (52.35%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAVR DVE LK+Q+AKILELLT  + KSVAGTS Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------------------ 120
           PGFTP   S+P M  + YPTSFP  +P    QQ  H                        
Sbjct: 61  PGFTPQRSSSPRMGDITYPTSFPAPNPNTTTQQAAHANNPISTPIMEGSKKISEEQGSRR 120

Query: 121 -------------GADVYGDIYASQLCLIRDVVIPPKFKTPEFEKYNGTT 134
                        GAD+YG I A+QLCLI DVVIPPKFKTP+FEKYNGT+
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTS 170

[Close]

BLAST of Tan0017230 vs. NCBI nr
Match: KAA0053386.1 (uncharacterized protein E6C27_scaffold428G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 158.7 bits (400), Expect = 7.3e-35
Identity = 101/242 (41.74%), Postives = 129/242 (53.31%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAV  DVE LK+Q+AKILELLT  + KSVAG S Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVCQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------GADVYGDIYASQ 120
            GF P   S+P M    YPTSFP Q+P    QQ +H            G D+YG I A+Q
Sbjct: 61  LGFIPQRSSSPRMVDKTYPTSFPAQNPNPTTQQADHASDPISTSITESGVDMYGSINAAQ 120

Query: 121 LCLIRDVVIPPKFKTPEFEKYNGTTLSEE--CYKDKVQNLDTSIKILFQILCDVGYLSVG 180
           LCLI DVVIPPKFKT +FEKYNGTT  +    Y  K+       K+L     D    S  
Sbjct: 121 LCLISDVVIPPKFKTSDFEKYNGTTCPKSLVMYCRKMSAYAHDDKLLIHCFQDSLVGSTS 180

Query: 181 SEQSSIDDLGLHNEERCIFHRGMVGHSIEDCDDFKQHVQKLMDSKLLIVSHTTTQEMNVD 229
                +D   +H  +R            ++ + FK++ Q+  +    +    T +E+ V 
Sbjct: 181 RWNMQLDGSQVHRWKR------------KNVETFKKYAQRWRELAAQVQPPLTDKELTVM 230

[Close]

BLAST of Tan0017230 vs. NCBI nr
Match: KAA0053386.1 (uncharacterized protein E6C27_scaffold428G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-11
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 139 YKDKVQNLDTSIKILFQILCDVGYLSVGSEQSSIDDLGLHNEERCIFHRGMVGHSIEDCD 198
           Y ++V +L T +  LFQIL    YLS        +  G  N ++C+FH  +  HSIEDC 
Sbjct: 445 YNNEVCDLTTLMNTLFQILYGTRYLSPRFNNGEGEKFGCANGKQCLFHPEIDDHSIEDCY 504

Query: 199 DFKQHVQKLMDSKLLIVSHTTTQEMNVDMITHASSSKKT 238
            FK  VQKL+D+K+L+V     Q++ VDMI  ASS+K+T
Sbjct: 505 KFKNEVQKLIDAKILLVGQMNMQDIKVDMIIDASSNKET 543

HSP 2 Score: 158.7 bits (400), Expect = 7.3e-35
Identity = 85/145 (58.62%), Postives = 98/145 (67.59%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAV  DVE LK+Q+AKILELLT  + KSVAG S Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVCQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPVYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------GADVYGDIYASQ 120
           PGF P   S+P M    YPTSFP Q+P    QQ +H            G D+YG I A+Q
Sbjct: 61  PGFIPQRSSSPRMVDRTYPTSFPAQNPNPTTQQADHASDPISTSITESGVDMYGSINAAQ 120

Query: 121 LCLIRDVVIPPKFKTPEFEKYNGTT 134
           LCLI +VVIPPKFKT +FEKYNGTT
Sbjct: 121 LCLISNVVIPPKFKTSDFEKYNGTT 145

[Close]

BLAST of Tan0017230 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-34
Identity = 89/170 (52.35%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAVR DVE LK+Q+AKILELLT  + KSVAGTS Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------------------ 120
           PGFTP   S+P M    YPTSFP  +P    QQ  H                        
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 -------------GADVYGDIYASQLCLIRDVVIPPKFKTPEFEKYNGTT 134
                        GAD+YG I A+QLCLI DVVIPPKFKTP+FEKYNGT+
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTS 170

[Close]

BLAST of Tan0017230 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-25
Identity = 63/134 (47.01%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 139 YKDKVQNLDTSIKILFQILCDVGYLSVGSEQSSIDDLGLHNEERCIFHRGMVGHSIEDCD 198
           +K+KV ++ TS+K LFQIL   GYLS        + +G  N E+C+FH     HSIEDC 
Sbjct: 499 HKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFHPETNDHSIEDCC 558

Query: 199 DFKQHVQKLMDSKLLIVSHTTTQEMNVDMITHASSSKKTIGEVPSSPKPLIIHYKSNPGT 258
           +FK  VQKLMDSK+L++   + QE+ V+MIT+ASS++KT  E     KP +IHY+  P  
Sbjct: 559 EFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSNEKTSNETTFMWKPFVIHYEEKPSI 618

Query: 259 ISHFQVPKQMIVEV 273
           +S+ Q PK M VE+
Sbjct: 619 MSYIQKPKAMTVEI 632

HSP 2 Score: 156.4 bits (394), Expect = 3.6e-34
Identity = 88/170 (51.76%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAVR DVE LK+Q+AKILELLT  + KSV GTS Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------------------ 120
           PGFTP   S+P M    YPTSFP  +P    QQ  H                        
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 -------------GADVYGDIYASQLCLIRDVVIPPKFKTPEFEKYNGTT 134
                        GAD+YG I A+QLCLI DVVIPPKFKTP+FEKYNGT+
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTS 170

[Close]

BLAST of Tan0017230 vs. ExPASy TrEMBL
Match: A0A5A7TXF2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001530 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-35
Identity = 89/170 (52.35%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAVR DVE LK+Q+AKILELLT  + KSVAGTS Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------------------ 120
           PGFTP   S+P M  + YPTSFP  +P    QQ  H                        
Sbjct: 61  PGFTPQRSSSPRMGDITYPTSFPAPNPNTTTQQAAHANNPISTPIMEGSKKISEEQGSRR 120

Query: 121 -------------GADVYGDIYASQLCLIRDVVIPPKFKTPEFEKYNGTT 134
                        GAD+YG I A+QLCLI DVVIPPKFKTP+FEKYNGT+
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTS 170

[Close]

BLAST of Tan0017230 vs. ExPASy TrEMBL
Match: A0A5D3CY34 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00410 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.5e-35
Identity = 85/145 (58.62%), Postives = 98/145 (67.59%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAV  DVE LK+Q+AKILELLT  + KSVAG S Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVCQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPVYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------GADVYGDIYASQ 120
           PGF P   S+P M    YPTSFP Q+P    QQ +H            G D+YG I A+Q
Sbjct: 61  PGFIPQRSSSPRMVDRTYPTSFPAQNPNPTTQQADHASDPISTSITESGVDMYGSINAAQ 120

Query: 121 LCLIRDVVIPPKFKTPEFEKYNGTT 134
           LCLI +VVIPPKFKT +FEKYNGTT
Sbjct: 121 LCLISNVVIPPKFKTSDFEKYNGTT 145

[Close]

BLAST of Tan0017230 vs. ExPASy TrEMBL
Match: A0A5A7UGP0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00490 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.5e-35
Identity = 101/242 (41.74%), Postives = 129/242 (53.31%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAV  DVE LK+Q+AKILELLT  + KSVAG S Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVCQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------GADVYGDIYASQ 120
            GF P   S+P M    YPTSFP Q+P    QQ +H            G D+YG I A+Q
Sbjct: 61  LGFIPQRSSSPRMVDKTYPTSFPAQNPNPTTQQADHASDPISTSITESGVDMYGSINAAQ 120

Query: 121 LCLIRDVVIPPKFKTPEFEKYNGTTLSEE--CYKDKVQNLDTSIKILFQILCDVGYLSVG 180
           LCLI DVVIPPKFKT +FEKYNGTT  +    Y  K+       K+L     D    S  
Sbjct: 121 LCLISDVVIPPKFKTSDFEKYNGTTCPKSLVMYCRKMSAYAHDDKLLIHCFQDSLVGSTS 180

Query: 181 SEQSSIDDLGLHNEERCIFHRGMVGHSIEDCDDFKQHVQKLMDSKLLIVSHTTTQEMNVD 229
                +D   +H  +R            ++ + FK++ Q+  +    +    T +E+ V 
Sbjct: 181 RWNMQLDGSQVHRWKR------------KNVETFKKYAQRWRELAAQVQPPLTDKELTVM 230

[Close]

BLAST of Tan0017230 vs. ExPASy TrEMBL
Match: A0A5A7UGP0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00490 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.5e-12
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 139 YKDKVQNLDTSIKILFQILCDVGYLSVGSEQSSIDDLGLHNEERCIFHRGMVGHSIEDCD 198
           Y ++V +L T +  LFQIL    YLS        +  G  N ++C+FH  +  HSIEDC 
Sbjct: 445 YNNEVCDLTTLMNTLFQILYGTRYLSPRFNNGEGEKFGCANGKQCLFHPEIDDHSIEDCY 504

Query: 199 DFKQHVQKLMDSKLLIVSHTTTQEMNVDMITHASSSKKT 238
            FK  VQKL+D+K+L+V     Q++ VDMI  ASS+K+T
Sbjct: 505 KFKNEVQKLIDAKILLVGQMNMQDIKVDMIIDASSNKET 543

HSP 2 Score: 157.9 bits (398), Expect = 6.0e-35
Identity = 89/170 (52.35%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAVR DVE LK+Q+AKILELLT  + KSVAGTS Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------------------ 120
           PGFTP   S+P M    YPTSFP  +P    QQ  H                        
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 -------------GADVYGDIYASQLCLIRDVVIPPKFKTPEFEKYNGTT 134
                        GAD+YG I A+QLCLI DVVIPPKFKTP+FEKYNGT+
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTS 170

[Close]

BLAST of Tan0017230 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-25
Identity = 63/134 (47.01%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 139 YKDKVQNLDTSIKILFQILCDVGYLSVGSEQSSIDDLGLHNEERCIFHRGMVGHSIEDCD 198
           +K+KV ++ TS+K LFQIL   GYLS        + +G  N E+C+FH     HSIEDC 
Sbjct: 499 HKNKVSDVATSMKTLFQILHGAGYLSPRFNNDDREKIGCTNNEQCLFHPETNDHSIEDCC 558

Query: 199 DFKQHVQKLMDSKLLIVSHTTTQEMNVDMITHASSSKKTIGEVPSSPKPLIIHYKSNPGT 258
           +FK  VQKLMDSK+L++   + QE+ V+MIT+ASS++KT  E     KP +IHY+  P  
Sbjct: 559 EFKNEVQKLMDSKILLIGQMSMQEIEVNMITNASSNEKTSNETTFMWKPFVIHYEEKPSI 618

Query: 259 ISHFQVPKQMIVEV 273
           +S+ Q PK M VE+
Sbjct: 619 MSYIQKPKAMTVEI 632

HSP 2 Score: 156.4 bits (394), Expect = 1.8e-34
Identity = 88/170 (51.76%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 1   MDDQVNDQVQAVRLDVEELKEQVAKILELLTARKEKSVAGTSLQAEIGQNQGLDDTPFYP 60
           MD+Q NDQVQAVR DVE LK+Q+AKILELLT  + KSV GTS Q E+  NQ L+D P YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  PGFTPPMVSNPHMAGVAYPTSFPVQDPGRAPQQTNH------------------------ 120
           PGFTP   S+P M    YPTSFP  +P    QQ  H                        
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 -------------GADVYGDIYASQLCLIRDVVIPPKFKTPEFEKYNGTT 134
                        GAD+YG I A+QLCLI DVVIPPKFKTP+FEKYNGT+
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTS 170

The following BLAST results are available for this feature:

BLAST of Tan0017230 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0017230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046607.1	2.5e-35	52.35	Gag-pro-like protein [Cucumis melo var. makuwa]	[more]
KAA0053386.1	7.3e-35	41.74	uncharacterized protein E6C27_scaffold428G00490 [Cucumis melo var. makuwa]	[more]
KAA0053386.1	1.1e-11	43.43	uncharacterized protein E6C27_scaffold428G00490 [Cucumis melo var. makuwa]	[more]
KAA0061241.1	1.2e-34	52.35	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
KAA0061241.1	4.0e-25	47.01	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]

Pages

BLAST of Tan0017230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXF2	1.2e-35	52.35	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114...	[more]
A0A5D3CY34	3.5e-35	58.62	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637...	[more]
A0A5A7UGP0	3.5e-35	41.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UGP0	5.5e-12	43.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V681	1.9e-25	47.01	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

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BLAST of Tan0017230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017230.1	Tan0017230.1	mRNA