Tan0017222 (gene) Snake gourd v1

Overview


Name	Tan0017222
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Heavy metal transport/detoxification superfamily protein
Location	LG01: 565286 .. 565815 (+)
RNA-Seq Expression	Tan0017222
Synteny	Tan0017222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATTTGCAAATAGTTCCAGCTGACACCAGATATAATGTGGAGCCGCAGTTGGTGGAGATGACGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGTCTTGTCTTATCCTCCTCTATCTCATTCTTTAATTTCCTTCCCTCATGCACTCATACATTTTACTTTAACTATTTCACTTTGGCATGCATATATATGATTTGATTGCAGGGATATATTCAGTTAATGTGGATTACGATCAACAGAAAGTGACAGTGTGGGGAATATGCAACAAATACCAAGTGTTGAGCACTGTCAGAAGCAAGAGAAAAGGGGCTCGTTTTTGGAATAATAATAATAATGATGATGAAGAAGAAGATCAAGACGACCTTCCCCCTCCTCCTCCAAACTTCAGTTCCAGGCCTTCTTTTGCACTTAACAAGCTTCGTTCTCTCAGTTTTAAATTAGCCTGTAAGAAGGTTTTCACCACTGCCAGATCATATTCCTTTCGAAGCATTTAG

mRNA sequence

ATGGCGAATTTGCAAATAGTTCCAGCTGACACCAGATATAATGTGGAGCCGCAGTTGGTGGAGATGACGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGGATATATTCAGTTAATGTGGATTACGATCAACAGAAAGTGACAGTGTGGGGAATATGCAACAAATACCAAGTGTTGAGCACTGTCAGAAGCAAGAGAAAAGGGGCTCGTTTTTGGAATAATAATAATAATGATGATGAAGAAGAAGATCAAGACGACCTTCCCCCTCCTCCTCCAAACTTCAGTTCCAGGCCTTCTTTTGCACTTAACAAGCTTCGTTCTCTCAGTTTTAAATTAGCCTGTAAGAAGGTTTTCACCACTGCCAGATCATATTCCTTTCGAAGCATTTAG

Coding sequence (CDS)

ATGGCGAATTTGCAAATAGTTCCAGCTGACACCAGATATAATGTGGAGCCGCAGTTGGTGGAGATGACGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCTCCCATCTCAAAGGGATATATTCAGTTAATGTGGATTACGATCAACAGAAAGTGACAGTGTGGGGAATATGCAACAAATACCAAGTGTTGAGCACTGTCAGAAGCAAGAGAAAAGGGGCTCGTTTTTGGAATAATAATAATAATGATGATGAAGAAGAAGATCAAGACGACCTTCCCCCTCCTCCTCCAAACTTCAGTTCCAGGCCTTCTTTTGCACTTAACAAGCTTCGTTCTCTCAGTTTTAAATTAGCCTGTAAGAAGGTTTTCACCACTGCCAGATCATATTCCTTTCGAAGCATTTAG

Protein sequence

MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKYQVLSTVRSKRKGARFWNNNNNDDEEEDQDDLPPPPPNFSSRPSFALNKLRSLSFKLACKKVFTTARSYSFRSI

Homology

[Close]

BLAST of Tan0017222 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.8e-08
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 18  QLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKYQVLSTVRSKRK 77
           Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASI-SKVK 309

Query: 78  GARFW 83
            A+FW
Sbjct: 310 NAQFW 313

[Close]

BLAST of Tan0017222 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07
Identity = 25/76 (32.89%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 7  VPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKY 66
          +  ++R  +   +VE+ V +   GC  K+ +A+S L G+ +V +D D+QKVTV G  ++ 
Sbjct: 5  IHGNSRLPIALSIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDRE 64

Query: 67 QVLSTVRSKRKGARFW 83
          +VL  V+   + A +W
Sbjct: 65 EVLKMVKRTGRTAEYW 80

[Close]

BLAST of Tan0017222 vs. ExPASy Swiss-Prot
Match: F4IC29 (Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.3e-06
Identity = 26/75 (34.67%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 15 VEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKYQVLSTVRS 74
          ++ Q +EM V +   GC +++  AL  ++G+ +V +D  QQKVTV G  ++ +VL  VR 
Sbjct: 8  IQLQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRK 67

Query: 75 KRKGARFWNNNNNDD 90
            + A  W    N D
Sbjct: 68 TGRRAELWQLPYNPD 82

[Close]

BLAST of Tan0017222 vs. ExPASy Swiss-Prot
Match: O65657 (Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX=3702 GN=HIPP23 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 18 QLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKYQVLSTVRSKRK 77
          Q VE+ V +   GC  KI  +LS LKG+ +V ++  QQKVTV G  +  +VL   ++  K
Sbjct: 32 QTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGK 91

Query: 78 GARFW 83
           A  W
Sbjct: 92 KAEIW 96

[Close]

BLAST of Tan0017222 vs. ExPASy Swiss-Prot
Match: Q9LP41 (Heavy metal-associated isoprenylated plant protein 29 OS=Arabidopsis thaliana OX=3702 GN=HIPP29 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-05
Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 22 MTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKYQVLSTVRSKRK 78
          M VP+   GC NK+ KAL  + G++ V +D  QQ+VTV G   + +VL   R+  K
Sbjct: 1  MEVPMDCPGCENKVRKALEKMNGVHDVQIDIKQQRVTVTGSAEQKKVLKVARNVTK 56

[Close]

BLAST of Tan0017222 vs. NCBI nr
Match: KAG7013336.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 107/137 (78.10%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MANLQIVPA T ++VEPQLVEM VPLYSHGCANKIHKALSHLKGIYSVNVDY++QKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFWNNNNNDDEEEDQDDLPPPPPNFSSRPSFALNKLRSLSF 120
           GICNK QVLSTVRSKRK ARFWNNN++DD   +         N S RPSF +NKLRSLSF
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNNNDDDDNNNNDPQAEEEGLN-SRRPSFGVNKLRSLSF 120

Query: 121 KLACKKVFTTARSYSFR 138
           KLACKKVFTT RSYS R
Sbjct: 121 KLACKKVFTTTRSYSLR 136

[Close]

BLAST of Tan0017222 vs. NCBI nr
Match: XP_022945716.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita moschata])

HSP 1 Score: 208.8 bits (530), Expect = 3.1e-50
Identity = 108/141 (76.60%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MANLQIVPA T ++VEPQLVEM VPLYSHGCANKIHKALSHLKGIYSVNVDY++QKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFWNN----NNNDDEEEDQDDLPPPPPNFSSRPSFALNKLR 120
           GICNK QVLSTVRSKRK ARFWNN    NNN+D + +++ L       S RPSF +NKLR
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNNDDDDNNNNDPQAEEEGLN------SRRPSFGVNKLR 120

Query: 121 SLSFKLACKKVFTTARSYSFR 138
           SLSFKLACKKVFTT RSYS R
Sbjct: 121 SLSFKLACKKVFTTTRSYSLR 135

[Close]

BLAST of Tan0017222 vs. NCBI nr
Match: KAG6574268.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.8 bits (530), Expect = 3.1e-50
Identity = 105/137 (76.64%), Postives = 114/137 (83.21%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MANLQIVPA   ++VEPQLVEM VPLYSHGCANKIHKALSHLKGIYSVNVDY++QKVTVW
Sbjct: 1   MANLQIVPAHNPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFWNNNNNDDEEEDQDDLPPPPPNFSSRPSFALNKLRSLSF 120
           GICNK QVLSTVRSKRK ARFWNNN++D+   + D         S RPSF +NKLRSLSF
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNNNDDDENNNNNDPQAEEEGLNSRRPSFGVNKLRSLSF 120

Query: 121 KLACKKVFTTARSYSFR 138
           KLACKKVFTT RSYS R
Sbjct: 121 KLACKKVFTTTRSYSLR 137

[Close]

BLAST of Tan0017222 vs. NCBI nr
Match: XP_022968373.1 (heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima])

HSP 1 Score: 208.8 bits (530), Expect = 3.1e-50
Identity = 109/145 (75.17%), Postives = 118/145 (81.38%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MANLQIVPA T ++VEPQLVEM VPLYSHGCANKIHKALSHLKGIYSVNVDYD+QKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFW--------NNNNNDDEEEDQDDLPPPPPNFSSRPSFAL 120
           GICNK QVLSTVRSKRK ARFW        NNNNN+D + +++ L       S RPSF +
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLN------SRRPSFGV 120

Query: 121 NKLRSLSFKLACKKVFTTARSYSFR 138
           NKLRSLSFKLACKKVFTT RSYS R
Sbjct: 121 NKLRSLSFKLACKKVFTTTRSYSLR 139

[Close]

BLAST of Tan0017222 vs. NCBI nr
Match: XP_023542922.1 (heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.4 bits (529), Expect = 4.0e-50
Identity = 108/141 (76.60%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MANLQIVPA T ++VEPQLVEM VPLYSHGCANKIHKALSHLKGIYSVNVDYD+QKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFWN----NNNNDDEEEDQDDLPPPPPNFSSRPSFALNKLR 120
           GICNK QVLSTVRSKRK ARFWN    +NNN+D + +++ L       S RPSF +NKLR
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNTDDDDNNNNDPQAEEEGLN------SRRPSFGVNKLR 120

Query: 121 SLSFKLACKKVFTTARSYSFR 138
           SLSFKLACKKVFTT RSYS R
Sbjct: 121 SLSFKLACKKVFTTTRSYSLR 135

[Close]

BLAST of Tan0017222 vs. ExPASy TrEMBL
Match: A0A6J1HXU2 (heavy metal-associated isoprenylated plant protein 28 OS=Cucurbita maxima OX=3661 GN=LOC111467638 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 109/145 (75.17%), Postives = 118/145 (81.38%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MANLQIVPA T ++VEPQLVEM VPLYSHGCANKIHKALSHLKGIYSVNVDYD+QKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYDEQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFW--------NNNNNDDEEEDQDDLPPPPPNFSSRPSFAL 120
           GICNK QVLSTVRSKRK ARFW        NNNNN+D + +++ L       S RPSF +
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNKDDDDNNNNNNNNDPQAEEEGLN------SRRPSFGV 120

Query: 121 NKLRSLSFKLACKKVFTTARSYSFR 138
           NKLRSLSFKLACKKVFTT RSYS R
Sbjct: 121 NKLRSLSFKLACKKVFTTTRSYSLR 139

[Close]

BLAST of Tan0017222 vs. ExPASy TrEMBL
Match: A0A6J1G1N8 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Cucurbita moschata OX=3662 GN=LOC111449858 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50
Identity = 108/141 (76.60%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MANLQIVPA T ++VEPQLVEM VPLYSHGCANKIHKALSHLKGIYSVNVDY++QKVTVW
Sbjct: 1   MANLQIVPAHTPFHVEPQLVEMMVPLYSHGCANKIHKALSHLKGIYSVNVDYEEQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFWNN----NNNDDEEEDQDDLPPPPPNFSSRPSFALNKLR 120
           GICNK QVLSTVRSKRK ARFWNN    NNN+D + +++ L       S RPSF +NKLR
Sbjct: 61  GICNKNQVLSTVRSKRKAARFWNNDDDDNNNNDPQAEEEGLN------SRRPSFGVNKLR 120

Query: 121 SLSFKLACKKVFTTARSYSFR 138
           SLSFKLACKKVFTT RSYS R
Sbjct: 121 SLSFKLACKKVFTTTRSYSLR 135

[Close]

BLAST of Tan0017222 vs. ExPASy TrEMBL
Match: A0A6J1CHX5 (uncharacterized protein LOC111011661 OS=Momordica charantia OX=3673 GN=LOC111011661 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.2e-46
Identity = 104/141 (73.76%), Postives = 111/141 (78.72%), Query Frame = 0


Query: 1   MANLQIVPADTR--YNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVT 60
           MA L IVPADTR  YNVEPQLVEM VPLYSHGCANK+HKALSHLKGIYSVNVD +QQKVT
Sbjct: 3   MAKLHIVPADTRYSYNVEPQLVEMMVPLYSHGCANKVHKALSHLKGIYSVNVDCNQQKVT 62

Query: 61  VWGICNKYQVLSTVRSKRKGARFWNNNNNDDEEEDQDDLPPPPPNFSSRPSFALNKLRSL 120
           VWGICNKYQVLSTVRSKRK ARFWN+    + +     +PPP P  S RP FA   +RSL
Sbjct: 63  VWGICNKYQVLSTVRSKRKAARFWNHETEQEADNSGPVVPPPAPPLSFRPRFA---VRSL 122

Query: 121 SFKLACKKV--FTTARSYSFR 138
           S KLACKKV   TT RSYSFR
Sbjct: 123 SLKLACKKVLNLTTPRSYSFR 140

[Close]

BLAST of Tan0017222 vs. ExPASy TrEMBL
Match: M0ZIL1 (HMA domain-containing protein OS=Solanum tuberosum OX=4113 GN=102593133 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.9e-37
Identity = 88/136 (64.71%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MAN+QIVPA    NVEPQ VEM VPLYS+GC  KI+ ALSH+KGIYSVNVD++QQKVTVW
Sbjct: 1   MANMQIVPAGRNVNVEPQYVEMMVPLYSYGCERKINNALSHIKGIYSVNVDFEQQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFWNNNNNDDEEEDQDDLPPPPPNFSSRPSFALNKLRSLSF 120
           GICNKY VL+TVRSKRK ARFWN  +N +E  + D        +  RP  AL + RSLS+
Sbjct: 61  GICNKYDVLATVRSKRKAARFWNTEDNMEEYSETDS--SATCRYRIRPPLALIRARSLSW 120

Query: 121 KLACKKVFTTARSYSF 137
           KLA KK FT  RSYSF
Sbjct: 121 KLALKKAFT--RSYSF 132

[Close]

BLAST of Tan0017222 vs. ExPASy TrEMBL
Match: A0A2P5EDT5 (Heavy metal-associated domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_205020 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.5e-37
Identity = 95/142 (66.90%), Postives = 105/142 (73.94%), Query Frame = 0


Query: 1   MANLQIVPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVW 60
           MANLQIVPA  R NVE Q VEM VPLYS+GC  K+ K LSHLKGIYSVNVDY+QQKVTVW
Sbjct: 1   MANLQIVPA-YRNNVEAQYVEMMVPLYSYGCEKKVKKTLSHLKGIYSVNVDYNQQKVTVW 60

Query: 61  GICNKYQVLSTVRSKRKGARFWNNNNNDDEEEDQDDLPPPPPN------FSSRPSFALNK 120
           GICNKY VL+TVRSKRK ARFWN ++N   EE +   P PP N        S+PS AL K
Sbjct: 61  GICNKYDVLTTVRSKRKEARFWNPDDNIALEESEPPSPSPPSNDYISTISMSKPSLALTK 120

Query: 121 LRSLSFKLACKKVFTTARSYSF 137
           +RS S+K A KKVFT  RSYSF
Sbjct: 121 VRSFSWK-AMKKVFT--RSYSF 138

[Close]

BLAST of Tan0017222 vs. TAIR 10
Match: AT4G27590.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 9.3e-29
Identity = 79/160 (49.38%), Postives = 95/160 (59.38%), Query Frame = 0


Query: 1   MANLQIVPADTRYN-VEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTV 60
           M +LQIVP    YN VE Q VEM VPLYS+GC  K+ +ALSHLKGIYSV VDY  QKVTV
Sbjct: 1   MGDLQIVPV---YNKVEAQYVEMMVPLYSYGCEKKVKRALSHLKGIYSVKVDYYNQKVTV 60

Query: 61  WGICNKYQVLSTVRSKRKGARFWN----NNNNDDEEED-----QDDL------------- 120
           WGICNK  VL+ V+ KRK ARFWN     NNN +  +D     +D +             
Sbjct: 61  WGICNKLDVLAMVKKKRKEARFWNVEEEENNNPESVDDCIVVKEDTIIKTSFDTDKSSAF 120

Query: 121 ---PPPPPNFSSRPSFALNKLRSLSFKLACKKVFTTARSY 135
                 PP FS RP  +L +  S ++K A KKVFT + S+
Sbjct: 121 YTYSTTPPRFSIRPPMSLIRTSSFTWK-AVKKVFTRSLSF 156

[Close]

BLAST of Tan0017222 vs. TAIR 10
Match: AT4G27590.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 73/151 (48.34%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 1   MANLQIVPADTRYN-VEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTV 60
           M +LQIVP    YN VE Q VEM VPLYS+GC  K+ +ALSHLKGIYSV VDY  QKVTV
Sbjct: 1   MGDLQIVPV---YNKVEAQYVEMMVPLYSYGCEKKVKRALSHLKGIYSVKVDYYNQKVTV 60

Query: 61  WGICNKYQVLSTVRSKRKGARFWN----NNNNDDEEED-----QDDL------------- 120
           WGICNK  VL+ V+ KRK ARFWN     NNN +  +D     +D +             
Sbjct: 61  WGICNKLDVLAMVKKKRKEARFWNVEEEENNNPESVDDCIVVKEDTIIKTSFDTDKSSAF 120

Query: 121 ---PPPPPNFSSRPSFALNKLRSLSFKLACK 126
                 PP FS RP  +L +  S ++K   K
Sbjct: 121 YTYSTTPPRFSIRPPMSLIRTSSFTWKAVKK 148

[Close]

BLAST of Tan0017222 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-09
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 18  QLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKYQVLSTVRSKRK 77
           Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASI-SKVK 309

Query: 78  GARFW 83
            A+FW
Sbjct: 310 NAQFW 313

[Close]

BLAST of Tan0017222 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-09
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 18  QLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKYQVLSTVRSKRK 77
           Q+V + V L+  GCA K+ K LS LKG+ S N+D+  +KVTV G      VL+++ SK K
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASI-SKVK 309

Query: 78  GARFW 83
            A+FW
Sbjct: 310 NAQFW 313

[Close]

BLAST of Tan0017222 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08
Identity = 25/76 (32.89%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 7  VPADTRYNVEPQLVEMTVPLYSHGCANKIHKALSHLKGIYSVNVDYDQQKVTVWGICNKY 66
          +  ++R  +   +VE+ V +   GC  K+ +A+S L G+ +V +D D+QKVTV G  ++ 
Sbjct: 5  IHGNSRLPIALSIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDRE 64

Query: 67 QVLSTVRSKRKGARFW 83
          +VL  V+   + A +W
Sbjct: 65 EVLKMVKRTGRTAEYW 80

The following BLAST results are available for this feature:

BLAST of Tan0017222 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDS4	6.8e-08	46.15	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
B3H6D0	1.5e-07	32.89	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
F4IC29	6.3e-06	34.67	Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX...	[more]
O65657	1.1e-05	40.00	Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX...	[more]
Q9LP41	1.4e-05	41.07	Heavy metal-associated isoprenylated plant protein 29 OS=Arabidopsis thaliana OX...	[more]

BLAST of Tan0017222 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013336.1	1.8e-50	78.10	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022945716.1	3.1e-50	76.60	protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita moschata]	[more]
KAG6574268.1	3.1e-50	76.64	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022968373.1	3.1e-50	75.17	heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima]	[more]
XP_023542922.1	4.0e-50	76.60	heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pep...	[more]

BLAST of Tan0017222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HXU2	1.5e-50	75.17	heavy metal-associated isoprenylated plant protein 28 OS=Cucurbita maxima OX=366...	[more]
A0A6J1G1N8	1.5e-50	76.60	protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1CHX5	2.2e-46	73.76	uncharacterized protein LOC111011661 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
M0ZIL1	1.9e-37	64.71	HMA domain-containing protein OS=Solanum tuberosum OX=4113 GN=102593133 PE=4 SV=...	[more]
A0A2P5EDT5	2.5e-37	66.90	Heavy metal-associated domain containing protein OS=Trema orientale OX=63057 GN=...	[more]

BLAST of Tan0017222 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27590.1	9.3e-29	49.38	Heavy metal transport/detoxification superfamily protein	[more]
AT4G27590.2	1.5e-26	48.34	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.2	4.8e-09	46.15	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	4.8e-09	46.15	Heavy metal transport/detoxification superfamily protein	[more]
AT3G56891.1	1.1e-08	32.89	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 24..59 e-value: 2.2E-9 score: 37.6
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 21..61 e-value: 7.12869E-10 score: 49.9117
None	No IPR available	GENE3D	3.30.70.100		coord: 17..80 e-value: 5.5E-11 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..107
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..110
None	No IPR available	PANTHER	PTHR22814:SF305	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 1..110
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 18..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017222.1	Tan0017222.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding