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Tan0016977 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACAAACCTTACAAATTTCTGATCTTTCATCAGTTTACACACTAAAATATCCCTCCACTATTGATTTTTCTTCAAACCCAATTCCAAAAATTGCAGCTTTTTCTTTGACCTAGCTAATTACAACAACAAGGAAGAAACTTTTTTAAGGAAAATGAGGAAGCGTCAAGTTGTGCTTAGAAGATCAGAAGAACCATCAAGAGACACTGTGGCTTCATCTTTCACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCACGCCGCCGGAGTCGGAGGGTATGCTGTCGACGGGTGCCGAGAATTCATGGCGAGTGGCGACGAAGGGACGACCGCTGCACTGACTTGCGCCGCCTGCGGTTGCCACCGGAGCTTCCATAGAAGACAAGTTGGAACTGAGGTAGTCTGTGATTGCTCTTCATCTCCCTCAAATGGAACTTGAAGATTACACACAATACTATAACTTCAATGTCTTGTAAGGGTTTCTTTTTTTTTTTCTTCTTCTTCTTTTGGGTGCTGGATTAAAAAAAAAAAAAGTCCTCTACAGGGGATTGAGAGTTGAGATAGAGCTTGTTGTGTTTGCTTGATTTTTTTTTTTTTTAATTTTATTTTGGGGTGAACTTGACTTGGACTGAAACTATGTGTGTTGAATTACCTGTGTATTTTGGATTCTTGATGAAAGGGGCAAGAACAAGAGAGAGGAGTGTTTTCTTTTACTTTTCTTTCTTTTTTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCAGTTCATTTGAGGATTAAAAGTCATGTAAATTTTTTCCATCATATCTCTTTTGAATTAATCTGTATGGGATTTGAGTGTATCAATCTTTTGGAGATTGAAGTAATA CACAAACCTTACAAATTTCTGATCTTTCATCAGTTTACACACTAAAATATCCCTCCACTATTGATTTTTCTTCAAACCCAATTCCAAAAATTGCAGCTTTTTCTTTGACCTAGCTAATTACAACAACAAGGAAGAAACTTTTTTAAGGAAAATGAGGAAGCGTCAAGTTGTGCTTAGAAGATCAGAAGAACCATCAAGAGACACTGTGGCTTCATCTTTCACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCACGCCGCCGGAGTCGGAGGGTATGCTGTCGACGGGTGCCGAGAATTCATGGCGAGTGGCGACGAAGGGACGACCGCTGCACTGACTTGCGCCGCCTGCGGTTGCCACCGGAGCTTCCATAGAAGACAAGTTGGAACTGAGGTAGTCTGTGATTGCTCTTCATCTCCCTCAAATGGAACTTGAAGATTACACACAATACTATAACTTCAATGTCTTGTAAGGGTTTCTTTTTTTTTTTCTTCTTCTTCTTTTGGGTGCTGGATTAAAAAAAAAAAAAGTCCTCTACAGGGGATTGAGAGTTGAGATAGAGCTTGTTGTGTTTGCTTGATTTTTTTTTTTTTTAATTTTATTTTGGGGTGAACTTGACTTGGACTGAAACTATGTGTGTTGAATTACCTGTGTATTTTGGATTCTTGATGAAAGGGGCAAGAACAAGAGAGAGGAGTGTTTTCTTTTACTTTTCTTTCTTTTTTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCAGTTCATTTGAGGATTAAAAGTCATGTAAATTTTTTCCATCATATCTCTTTTGAATTAATCTGTATGGGATTTGAGTGTATCAATCTTTTGGAGATTGAAGTAATA ATGAGGAAGCGTCAAGTTGTGCTTAGAAGATCAGAAGAACCATCAAGAGACACTGTGGCTTCATCTTTCACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCACGCCGCCGGAGTCGGAGGGTATGCTGTCGACGGGTGCCGAGAATTCATGGCGAGTGGCGACGAAGGGACGACCGCTGCACTGACTTGCGCCGCCTGCGGTTGCCACCGGAGCTTCCATAGAAGACAAGTTGGAACTGAGGTAGTCTGTGATTGCTCTTCATCTCCCTCAAATGGAACTTGA MRKRQVVLRRSEEPSRDTVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAALTCAACGCHRSFHRRQVGTEVVCDCSSSPSNGT Homology
BLAST of Tan0016977 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 2.8e-37 Identity = 80/99 (80.81%), Postives = 87/99 (87.88%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 9.4e-25 Identity = 56/97 (57.73%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.9e-24 Identity = 52/70 (74.29%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy Swiss-Prot
Match: Q2RB28 (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.9e-24 Identity = 52/70 (74.29%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.9e-24 Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 0
BLAST of Tan0016977 vs. NCBI nr
Match: XP_016902406.1 (PREDICTED: mini zinc finger protein 2 [Cucumis melo] >KAA0039501.1 mini zinc finger protein 2 [Cucumis melo var. makuwa] >TYK15255.1 mini zinc finger protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 194.5 bits (493), Expect = 4.2e-46 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Tan0016977 vs. NCBI nr
Match: XP_038890678.1 (mini zinc finger protein 2-like [Benincasa hispida]) HSP 1 Score: 187.6 bits (475), Expect = 5.1e-44 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Tan0016977 vs. NCBI nr
Match: XP_022939280.1 (mini zinc finger protein 2-like [Cucurbita moschata] >XP_023550974.1 mini zinc finger protein 2-like [Cucurbita pepo subsp. pepo] >KAG6578586.1 Mini zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.5 bits (467), Expect = 4.3e-43 Identity = 91/96 (94.79%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Tan0016977 vs. NCBI nr
Match: XP_022993699.1 (mini zinc finger protein 2 [Cucurbita maxima]) HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42 Identity = 90/96 (93.75%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Tan0016977 vs. NCBI nr
Match: XP_004148693.1 (mini zinc finger protein 2 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 2.1e-42 Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy TrEMBL
Match: A0A5D3CUT9 (Mini zinc finger protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00300 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy TrEMBL
Match: A0A1S4E2E9 (mini zinc finger protein 2 OS=Cucumis melo OX=3656 GN=LOC103498482 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy TrEMBL
Match: A0A6J1FM92 (mini zinc finger protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445245 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43 Identity = 91/96 (94.79%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy TrEMBL
Match: A0A6J1K0U7 (mini zinc finger protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489611 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 7.9e-43 Identity = 90/96 (93.75%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Tan0016977 vs. ExPASy TrEMBL
Match: A0A0A0KVJ7 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_5G636500 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42 Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of Tan0016977 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 ) HSP 1 Score: 155.6 bits (392), Expect = 2.0e-38 Identity = 80/99 (80.81%), Postives = 87/99 (87.88%), Query Frame = 0
BLAST of Tan0016977 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 ) HSP 1 Score: 114.0 bits (284), Expect = 6.7e-26 Identity = 56/97 (57.73%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of Tan0016977 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger ) HSP 1 Score: 110.9 bits (276), Expect = 5.6e-25 Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 0
BLAST of Tan0016977 vs. TAIR 10
Match: AT3G50890.1 (homeobox protein 28 ) HSP 1 Score: 87.0 bits (214), Expect = 8.7e-18 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of Tan0016977 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 ) HSP 1 Score: 85.9 bits (211), Expect = 1.9e-17 Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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