Tan0016879 (gene) Snake gourd v1

Overview


Name	Tan0016879
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Nuclear transcription factor Y subunit C
Location	LG02: 91241927 .. 91242474 (-)
RNA-Seq Expression	Tan0016879
Synteny	Tan0016879

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAGATTTCCATGATTCGATCAAATCGTCTGTGCTAAATCGAAAGCCATTTTCCAGCCGTTGAATTACTGCAGTTCATACAGATTCCGGACATGGCGGAAGAAGAATCCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGAAGAGTGAAGAAGATAATGAAGATCGATAAGGAGGTCGGCAAAGTGAACTCAGAAGCCCTGTTTCTCGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCCGAGAAGAAACGGAAGACCGTGAAGCTCGAACACATCCGAATCGCCGTCAAAAGACATCGATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCGTCTCAGCCGTCGGATGCTCCGGCGAAGGACGAGAATCGCACTCGCACTGTTGTTGATAAAGCGGTTCCTCAAGGAACCCGTCGAATCGATGATTTCTTTCGTCCGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCCTAGGCGCTCAATCTTCAACAGGCAAAAGCTCACAAG

mRNA sequence

CCCAGATTTCCATGATTCGATCAAATCGTCTGTGCTAAATCGAAAGCCATTTTCCAGCCGTTGAATTACTGCAGTTCATACAGATTCCGGACATGGCGGAAGAAGAATCCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGAAGAGTGAAGAAGATAATGAAGATCGATAAGGAGGTCGGCAAAGTGAACTCAGAAGCCCTGTTTCTCGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCCGAGAAGAAACGGAAGACCGTGAAGCTCGAACACATCCGAATCGCCGTCAAAAGACATCGATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCGTCTCAGCCGTCGGATGCTCCGGCGAAGGACGAGAATCGCACTCGCACTGTTGTTGATAAAGCGGTTCCTCAAGGAACCCGTCGAATCGATGATTTCTTTCGTCCGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCCTAGGCGCTCAATCTTCAACAGGCAAAAGCTCACAAG

Coding sequence (CDS)

ATGGCGGAAGAAGAATCCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGAAGAGTGAAGAAGATAATGAAGATCGATAAGGAGGTCGGCAAAGTGAACTCAGAAGCCCTGTTTCTCGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCCGAGAAGAAACGGAAGACCGTGAAGCTCGAACACATCCGAATCGCCGTCAAAAGACATCGATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCGTCTCAGCCGTCGGATGCTCCGGCGAAGGACGAGAATCGCACTCGCACTGTTGTTGATAAAGCGGTTCCTCAAGGAACCCGTCGAATCGATGATTTCTTTCGTCCGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCCTAG

Protein sequence

MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTRRIDDFFRPPAKTTSAETNES

Homology

[Close]

BLAST of Tan0016879 vs. ExPASy Swiss-Prot
Match: B0XTT5 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=nctA PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.5e-07
Identity = 38/116 (32.76%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++ +FP  R+K+IM+ D++VGKV       VS A ELF+  L  K+A+ A ++  K V  
Sbjct: 130 VKTKFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAKEARDRNSKRVTA 189

Query: 70  EHIRIAVKRHRSISDFLLDSL-PLPSQPSDAPAKDENRTRTVVDKAVPQGTRRIDD 125
            H++ AV +   + DFL D +  +P QP+     D++ +         +G RR  D
Sbjct: 190 THLKQAVVKD-EVLDFLADIIAKVPDQPAGGRKHDDDGSDQNEQPKRKRGGRRPKD 244

[Close]

BLAST of Tan0016879 vs. ExPASy Swiss-Prot
Match: Q4X095 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=nctA PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.5e-07
Identity = 38/116 (32.76%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++ +FP  R+K+IM+ D++VGKV       VS A ELF+  L  K+A+ A ++  K V  
Sbjct: 130 VKTKFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAKEARDRNSKRVTA 189

Query: 70  EHIRIAVKRHRSISDFLLDSL-PLPSQPSDAPAKDENRTRTVVDKAVPQGTRRIDD 125
            H++ AV +   + DFL D +  +P QP+     D++ +         +G RR  D
Sbjct: 190 THLKQAVVKD-EVLDFLADIIAKVPDQPAGGRKHDDDGSDQNEQPKRKRGGRRPKD 244

[Close]

BLAST of Tan0016879 vs. ExPASy Swiss-Prot
Match: Q54DA1 (Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 11 RPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLE 70
          + +FP  R+KKIM+ D+EVGK+ S    L+S   ELF+  L  K+ ++   KK K + + 
Sbjct: 6  KTKFPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGKVISVN 65

Query: 71 HIRIAVKRHRSISDFLLD 89
          H++  +K+  S  DFL +
Sbjct: 66 HLKECIKQ-ESTFDFLTE 82

[Close]

BLAST of Tan0016879 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.9e-06
Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 14 FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D+E+GKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71

Query: 74 IAVKRHRSISDFLLD 89
            ++  +   DFL D
Sbjct: 72 QCIELEQQF-DFLKD 85

[Close]

BLAST of Tan0016879 vs. ExPASy Swiss-Prot
Match: Q14919 (Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 53.1 bits (126), Expect = 2.9e-06
Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 14 FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D+E+GKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++
Sbjct: 12 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71

Query: 74 IAVKRHRSISDFLLD 89
            ++  +   DFL D
Sbjct: 72 QCIELEQQF-DFLKD 85

[Close]

BLAST of Tan0016879 vs. NCBI nr
Match: XP_038884228.1 (NCT transcriptional regulatory complex subunit A [Benincasa hispida])

HSP 1 Score: 249.2 bits (635), Expect = 2.1e-62
Identity = 130/140 (92.86%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MAEEESG+AIRPEFPTGRVKKIMK+DK++ KVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MAEEESGDAIRPEFPTGRVKKIMKLDKDIEKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLP QPSDAPAKDENRTRTVVDK VP+GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPPQPSDAPAKDENRTRTVVDKVVPEGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR PAKTTSAE NES
Sbjct: 121 RIDDFFRRPAKTTSAENNES 140

[Close]

BLAST of Tan0016879 vs. NCBI nr
Match: KAA0064731.1 (dr1-associated corepressor [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 3.9e-61
Identity = 127/140 (90.71%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           M EEESGEAIRPEFPTGRVKKIMK+DK++GKVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLPSQPSDAPAKDENR R VVDK  P GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR P KTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of Tan0016879 vs. NCBI nr
Match: XP_008445504.1 (PREDICTED: dr1-associated corepressor [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 1.9e-60
Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           M EEESGEAIRPEFPTGRVKKIMK+DK++GKVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLPSQPSDA AKDENR R VVDK  P GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR P KTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of Tan0016879 vs. NCBI nr
Match: XP_022997291.1 (DNA polymerase epsilon subunit C [Cucurbita maxima])

HSP 1 Score: 241.1 bits (614), Expect = 5.7e-60
Identity = 124/140 (88.57%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MAEEE GEAIRPEFP GR+KKIMK+DK++GKVNSEALFLVSCATELFL+LLAEKSAEVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIRIAVKRH+SISDFLLDSLPLPSQPSDAPAKDENRTR VVDK  P+GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR P KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of Tan0016879 vs. NCBI nr
Match: XP_023547243.1 (putative transcription factor C16C4.22 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 123/140 (87.86%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MAE+ESGEAIRPEFP GR+KKIMK+DK++GKVNSEALFLVSCATELFL+LLAEKS+EVAA
Sbjct: 1   MAEKESGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIRIAVKRH+SISDFLLDSLPLPSQPSDAPAKDENRTR VVDK  P+GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR PAKT SAE NE+
Sbjct: 121 RIDDFFRRPAKTASAEINET 140

[Close]

BLAST of Tan0016879 vs. ExPASy TrEMBL
Match: A0A5A7VG98 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00350 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.9e-61
Identity = 127/140 (90.71%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           M EEESGEAIRPEFPTGRVKKIMK+DK++GKVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLPSQPSDAPAKDENR R VVDK  P GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR P KTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of Tan0016879 vs. ExPASy TrEMBL
Match: A0A1S3BDL4 (dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 9.4e-61
Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           M EEESGEAIRPEFPTGRVKKIMK+DK++GKVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIR+AVKRHRSISDFLLDSLPLPSQPSDA AKDENR R VVDK  P GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR P KTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of Tan0016879 vs. ExPASy TrEMBL
Match: A0A6J1K737 (DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.7e-60
Identity = 124/140 (88.57%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MAEEE GEAIRPEFP GR+KKIMK+DK++GKVNSEALFLVSCATELFL+LLAEKSAEVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIRIAVKRH+SISDFLLDSLPLPSQPSDAPAKDENRTR VVDK  P+GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR P KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of Tan0016879 vs. ExPASy TrEMBL
Match: A0A6J1HCT3 (DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.8e-59
Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MAEEE GEAIRPEFP GR+KKIMK+DK++GKVNSEALFLVSCATELFL+LLAEKS+EVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAA 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIRIAVKRH+SI DFLLDSLPLPSQPSDAPAKDENRTR VVDK  P+GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSIGDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR P KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of Tan0016879 vs. ExPASy TrEMBL
Match: A0A6J1BRI3 (nuclear transcription factor Y subunit C-1 OS=Momordica charantia OX=3673 GN=LOC111005093 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.2e-59
Identity = 124/140 (88.57%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MAEEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60
           MAEEESGEAIRPE PTGRVKKIMK+DK+V KVNSEALFLVSCAT+LFLKLLAEKSAEVA 
Sbjct: 1   MAEEESGEAIRPEIPTGRVKKIMKVDKDVCKVNSEALFLVSCATDLFLKLLAEKSAEVAT 60

Query: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQGTR 120
           EKKRKTVKLEHIRIAVKRHR ISDFLLDSLPLP QPSDAPAK+ENRTRT  DKA P+GTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHRPISDFLLDSLPLPPQPSDAPAKNENRTRTAADKAAPEGTR 120

Query: 121 RIDDFFRPPAKTTSAETNES 141
           RIDDFFR PAKTTS E NES
Sbjct: 121 RIDDFFRKPAKTTSDENNES 140

[Close]

BLAST of Tan0016879 vs. TAIR 10
Match: AT5G43250.1 (nuclear factor Y, subunit C13 )

HSP 1 Score: 151.0 bits (380), Expect = 7.2e-37
Identity = 87/137 (63.50%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 3   EEESGEAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEK 62
           EEE G +IRPEFP GRVKKIMK+DK++ K+NSEAL +++ +TELFL  LAEKSA V AEK
Sbjct: 2   EEEEG-SIRPEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEK 61

Query: 63  KRKTVKLEHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQ---GT 122
           KRKTV L+H+RIAVKRH+  SDFLLDSLPLP+QP          T++V DK +P    GT
Sbjct: 62  KRKTVNLDHLRIAVKRHQPTSDFLLDSLPLPAQP-------VKHTKSVSDKKIPAPPIGT 121

Query: 123 RRIDDFF-RPPAKTTSA 136
           RRIDDFF +  AKT SA
Sbjct: 122 RRIDDFFSKGKAKTDSA 130

[Close]

BLAST of Tan0016879 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 14 FPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 73
          FP  R+KKIM+ D++VGK+      LVS + ELFL+ L +++ E+  E+  KTV   H++
Sbjct: 9  FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLK 68

Query: 74 IAVKRHRSISDFL 87
            V+R+ ++ DFL
Sbjct: 69 HCVERY-NVFDFL 80

[Close]

BLAST of Tan0016879 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 10  IRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 69
           ++  FP  R+KKIM+ D+EVGK+      LVS A ELFL+ L   + +V   +  KTV  
Sbjct: 5   LQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNA 64

Query: 70  EHIRIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRT--RTVVD 113
            H++  V+   ++ DFL D++        +  +D++ T  R VVD
Sbjct: 65  FHLKQCVQA-TNVFDFLRDTVAKVPDLGGSDTEDQSATKRRKVVD 108

[Close]

BLAST of Tan0016879 vs. TAIR 10
Match: AT1G07980.1 (nuclear factor Y, subunit C10 )

HSP 1 Score: 51.6 bits (122), Expect = 5.9e-07
Identity = 28/91 (30.77%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 3   EEESG--EAIRPEFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAA 62
           EE+ G  E  + +FP  R+++IM+ D    ++  +A+FLV+ ATE+F++  +E++ + + 
Sbjct: 97  EEDDGGAEDAKIKFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSV 156

Query: 63  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLP 92
           + K+K +  +H+   V   +   +FL DS+P
Sbjct: 157 KDKKKFIHYKHLSSVVSNDQRY-EFLADSVP 186

[Close]

BLAST of Tan0016879 vs. TAIR 10
Match: AT5G27910.1 (nuclear factor Y, subunit C8 )

HSP 1 Score: 47.8 bits (112), Expect = 8.6e-06
Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 13  EFPTGRVKKIMKIDKEVGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHI 72
           + P  R+KKIMK D +V  + SEA  L+S A E+F+  L  +S   A E KR T++  ++
Sbjct: 36  DLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNV 95

Query: 73  RIAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRTVVDKAVPQG 119
             AV +   I DFLLD      + S A A D      + D  +P G
Sbjct: 96  DAAVAQ-TVIFDFLLDDDIEVKRESVAAAADPVAMPPIDDGELPPG 140

The following BLAST results are available for this feature:

BLAST of Tan0016879 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0XTT5	7.5e-07	32.76	NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain...	[more]
Q4X095	7.5e-07	32.76	NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain...	[more]
Q54DA1	2.2e-06	37.18	Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1...	[more]
Q2YDP3	2.9e-06	37.33	Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1	[more]
Q14919	2.9e-06	37.33	Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3	[more]

BLAST of Tan0016879 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884228.1	2.1e-62	92.86	NCT transcriptional regulatory complex subunit A [Benincasa hispida]	[more]
KAA0064731.1	3.9e-61	90.71	dr1-associated corepressor [Cucumis melo var. makuwa]	[more]
XP_008445504.1	1.9e-60	90.71	PREDICTED: dr1-associated corepressor [Cucumis melo]	[more]
XP_022997291.1	5.7e-60	88.57	DNA polymerase epsilon subunit C [Cucurbita maxima]	[more]
XP_023547243.1	1.3e-59	87.86	putative transcription factor C16C4.22 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0016879 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VG98	1.9e-61	90.71	Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BDL4	9.4e-61	90.71	dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1	[more]
A0A6J1K737	2.7e-60	88.57	DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=...	[more]
A0A6J1HCT3	1.8e-59	87.14	DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 P...	[more]
A0A6J1BRI3	5.2e-59	88.57	nuclear transcription factor Y subunit C-1 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Tan0016879 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43250.1	7.2e-37	63.50	nuclear factor Y, subunit C13	[more]
AT3G12480.1	1.2e-07	41.10	nuclear factor Y, subunit C11	[more]
AT5G19490.1	1.2e-07	35.24	Histone superfamily protein	[more]
AT1G07980.1	5.9e-07	30.77	nuclear factor Y, subunit C10	[more]
AT5G27910.1	8.6e-06	36.79	nuclear factor Y, subunit C8	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..91 e-value: 3.7E-23 score: 84.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 12..91
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 13..76 e-value: 4.7E-20 score: 71.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..140
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 2..128
None	No IPR available	PANTHER	PTHR10252:SF95	NUCLEAR FACTOR Y, SUBUNIT C13	coord: 2..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016879.1	Tan0016879.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity