Tan0016870 (gene) Snake gourd v1

Overview


Name	Tan0016870
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DCC family protein At1g52590, chloroplastic
Location	LG04: 85155184 .. 85156581 (-)
RNA-Seq Expression	Tan0016870
Synteny	Tan0016870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTTCGGCTTTCCGGTGGAGTTCCGGCCAGTCTTGTTCCGCCGTCCAGGGCGCAAGCTCGAACACGGCATTCAATGGCTTTCGCCTCTCTATCTCCGGCAACTAAAGATGAAACGATAGATTGGGTGGAAGCAACTTCCGACTTCTTCGGAAAAGATACGAGACCGATTATGCTATTTGACGGTACGGGTTTCTTTAAGTGTTTCGCTTGCTGTTCTTTCTGAATATGAAAATCTCTGATTCTTTTCTACTGATCAAATTGAGCTGTAGCGAGATGCTAGTGTATGATTGTAGTGTATGATTTTTCTATGTTTTTCGGATTTATCGATGATTTTATCTATCAGGTGTATGCAATTTGTGTAATGGAGGTGTCAGATTTGTTCGTGCTAATGACCGAAACAGGTGGGTCTTCGTTTTCTTTTGATTTCTTTTTTTCATGAAATTTCTAGGAAAGATGATAATGAAACTTGGAGCTGAATTTTGATGCCCTGTATAGCCCCTCTTCAGCATGGTGAATGAAATTATATCTTTAGGAATCCTTGGTTTATTATGCTTTGATACCTTCATAATCTTGTTTCCATGATTGAATTGCAACCCCATTAATTTAAGTTTATATTTCTGTAAACGGGCCACAGTTGTTCTCTATGGAGAAGTTGGAATTATCATTGGCATTTCCTTGAAACCTTATAGCTCTTCTGCTTCTTGGATTTAAGAATTTCCCATTGACGTTTACAGGAGAATACGATTAGAGGCTCTCCAAAGTGAAGCTGGCAAGAAGCTGTTGAGAAGGTCAGGAAGAGCACCGGATGATATTTCGAGTGTTGTACTTGTTGAAAAGGACAGGTATATGCATCCAGCTCCTCTATTGAAGGTTCTAATGAGCTAGTTTTTCCCATGTTATTAATGATCTATGGCGTTTCTAATTTTTCTTGAAGAAATAGAAATCATAATTACAAGACAATAGATTTCTTTAATGTATTGATTTCCTGGAAAAGAGAAGAAGTTCCCCTGGTTTACTGAGAAATAAGATTTCTAATTTCCACAATGCATTACTGCTATAATTTAAGTAGAAGATTTTGATGATAAATTTAAATACTGTACTACAGATCTTATATCAAGTCTGAGGCTGTGCTAAGAATAATGGAACATTTAGAGTTACCCTTTCCTCAGCTGGCCCTTTTTATCCAGTTTGTGCCTCTGTAAGTCCTTTCTTCTTATCATGTAAAGTTTTTCCTGCACCACACACCTCTTAACAGAAAAAATCAAGGTGTGAGCACTATCTTTCTAATTCTGTTTACTAACTGCATTGCAGGTTTGTTCGAAATTTTGTGTATGACAATATTGCAGATAATCGTTATAGGCTATTTGGACGCTCGGAGTCGTGTGAAATATAG

mRNA sequence

ATGGCACTTCGGCTTTCCGGTGGAGTTCCGGCCAGTCTTGTTCCGCCGTCCAGGGCGCAAGCTCGAACACGGCATTCAATGGCTTTCGCCTCTCTATCTCCGGCAACTAAAGATGAAACGATAGATTGGGTGGAAGCAACTTCCGACTTCTTCGGAAAAGATACGAGACCGATTATGCTATTTGACGGTGTATGCAATTTGTGTAATGGAGGTGTCAGATTTGTTCGTGCTAATGACCGAAACAGGAGAATACGATTAGAGGCTCTCCAAAGTGAAGCTGGCAAGAAGCTGTTGAGAAGGTCAGGAAGAGCACCGGATGATATTTCGAGTGTTGTACTTGTTGAAAAGGACAGATCTTATATCAAGTCTGAGGCTGTGCTAAGAATAATGGAACATTTAGAGTTACCCTTTCCTCAGCTGGCCCTTTTTATCCAGTTTGTGCCTCTGTTTGTTCGAAATTTTGTGTATGACAATATTGCAGATAATCGTTATAGGCTATTTGGACGCTCGGAGTCGTGTGAAATATAG

Coding sequence (CDS)

ATGGCACTTCGGCTTTCCGGTGGAGTTCCGGCCAGTCTTGTTCCGCCGTCCAGGGCGCAAGCTCGAACACGGCATTCAATGGCTTTCGCCTCTCTATCTCCGGCAACTAAAGATGAAACGATAGATTGGGTGGAAGCAACTTCCGACTTCTTCGGAAAAGATACGAGACCGATTATGCTATTTGACGGTGTATGCAATTTGTGTAATGGAGGTGTCAGATTTGTTCGTGCTAATGACCGAAACAGGAGAATACGATTAGAGGCTCTCCAAAGTGAAGCTGGCAAGAAGCTGTTGAGAAGGTCAGGAAGAGCACCGGATGATATTTCGAGTGTTGTACTTGTTGAAAAGGACAGATCTTATATCAAGTCTGAGGCTGTGCTAAGAATAATGGAACATTTAGAGTTACCCTTTCCTCAGCTGGCCCTTTTTATCCAGTTTGTGCCTCTGTTTGTTCGAAATTTTGTGTATGACAATATTGCAGATAATCGTTATAGGCTATTTGGACGCTCGGAGTCGTGTGAAATATAG

Protein sequence

MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI

Homology

[Close]

BLAST of Tan0016870 vs. ExPASy Swiss-Prot
Match: Q9SSR1 (DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g52590 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.1e-59
Identity = 118/171 (69.01%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 9   VPAS---LVPPSRAQARTRHSMAFASLSPAT-KDETIDWVEATSDFFGKDTRPIMLFDGV 68
           +PAS   L   SRAQ R R S   AS +  T + +++DWV+ TS FF +D RPIMLFDGV
Sbjct: 5   IPASFGRLTITSRAQVRVRVS---ASANQRTIRRDSVDWVKETSSFFEEDKRPIMLFDGV 64

Query: 69  CNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSE 128
           CNLCNGGV+FVR +DRNR IR EALQSEAGKKLL RSGRAPDDISSVVLVE DRSYIKSE
Sbjct: 65  CNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRSYIKSE 124

Query: 129 AVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           AVL+IM++++LPFPQLA F+QF PLFVR+F+Y+N+A+NRY +FGRS+SCE+
Sbjct: 125 AVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172

[Close]

BLAST of Tan0016870 vs. ExPASy Swiss-Prot
Match: P40761 (Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) OX=224308 GN=yuxK PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-20
Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 58  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKD 117
           ++LFDGVCNLCNG V+F+   D +  I   +LQSE G+ LL++SG   D   S V +E  
Sbjct: 10  VLLFDGVCNLCNGAVQFIIKRDPDGLISFTSLQSETGQSLLKKSGLPTDRFDSFVFIEDG 69

Query: 118 RSYIKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESC 174
           + Y KS A +++  HL  P+    LF   VP  VR+ VY  IA NRY+ FG+   C
Sbjct: 70  QVYTKSTAAIKVFRHLRGPWRLFVLFFA-VPKPVRDMVYSFIAKNRYKWFGKKNEC 124

[Close]

BLAST of Tan0016870 vs. NCBI nr
Match: XP_022153577.1 (DCC family protein At1g52590, chloroplastic [Momordica charantia])

HSP 1 Score: 310.5 bits (794), Expect = 9.5e-81
Identity = 153/175 (87.43%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MA+ + G +PA  +PP +AQAR RHS+AFASLSPATK ETIDW+EATSDFF KD+RPIML
Sbjct: 49  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 108

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 109 FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 168

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAV+RIMEHLELPFPQLA F+QFVPLFVRNFVY+N+ADNRYRLFGRSESCEI
Sbjct: 169 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 223

[Close]

BLAST of Tan0016870 vs. NCBI nr
Match: XP_038900615.1 (DCC family protein At1g52590, chloroplastic [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 157/175 (89.71%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MAL LSGG+PA  VPPS A+AR  H+++ ASLSP TKDETIDWVEATSDFF KDTRPIML
Sbjct: 1   MALPLSGGIPARFVPPSLAKARPPHTISSASLSPTTKDETIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAVLRIME+LELPFPQLALF+QFVPLFVRN VYDNIADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEYLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of Tan0016870 vs. NCBI nr
Match: XP_023527546.1 (DCC family protein At1g52590, chloroplastic, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 153/175 (87.43%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MAL LSG VPA  V PS A  R R  +AF SLS AT D TIDWVEATSDFF KDTRPIML
Sbjct: 14  MALPLSGRVPARFVLPSMAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 73

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 74  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 133

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALF++FVPLFVRN  YDNIADNRY LFGRSESCEI
Sbjct: 134 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 188

[Close]

BLAST of Tan0016870 vs. NCBI nr
Match: XP_022980169.1 (DCC family protein At1g52590, chloroplastic [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 153/175 (87.43%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MAL LSG VPA  V PS A  R R  +AF SLS AT D TIDWVEATSDFF KDTRPIML
Sbjct: 1   MALPLSGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALF++FVPLFVRN  YDNIADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of Tan0016870 vs. NCBI nr
Match: XP_022955810.1 (DCC family protein At1g52590, chloroplastic [Cucurbita moschata])

HSP 1 Score: 295.8 bits (756), Expect = 2.4e-76
Identity = 152/175 (86.86%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MAL +SG VPA  V PS A  R R  +AF SLS AT D TIDWVEATSDFF KDTRPIML
Sbjct: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALF++FVPLFVRN  YDNIADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of Tan0016870 vs. ExPASy TrEMBL
Match: A0A6J1DJB0 (DCC family protein At1g52590, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021048 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.6e-81
Identity = 153/175 (87.43%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MA+ + G +PA  +PP +AQAR RHS+AFASLSPATK ETIDW+EATSDFF KD+RPIML
Sbjct: 49  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 108

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 109 FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 168

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAV+RIMEHLELPFPQLA F+QFVPLFVRNFVY+N+ADNRYRLFGRSESCEI
Sbjct: 169 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 223

[Close]

BLAST of Tan0016870 vs. ExPASy TrEMBL
Match: A0A6J1IYJ5 (DCC family protein At1g52590, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479639 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.9e-77
Identity = 153/175 (87.43%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MAL LSG VPA  V PS A  R R  +AF SLS AT D TIDWVEATSDFF KDTRPIML
Sbjct: 1   MALPLSGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALF++FVPLFVRN  YDNIADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of Tan0016870 vs. ExPASy TrEMBL
Match: A0A6J1GW36 (DCC family protein At1g52590, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457690 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 152/175 (86.86%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MAL +SG VPA  V PS A  R R  +AF SLS AT D TIDWVEATSDFF KDTRPIML
Sbjct: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAVLRIMEHLELPFPQLALF++FVPLFVRN  YDNIADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of Tan0016870 vs. ExPASy TrEMBL
Match: A0A0A0KVF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004930 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.0e-76
Identity = 151/175 (86.29%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPSRAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIML 60
           MAL LSG  PA  +PPS  +A   H +A ASLSP  KDETIDWVEATS+FF KDTRPIML
Sbjct: 10  MALPLSGRFPAPFLPPSMRKAGLLHPIASASLSPTIKDETIDWVEATSNFFEKDTRPIML 69

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQS+AGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 70  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSDAGKKLLRRSGRAPDDISSVVLVEKDRSY 129

Query: 121 IKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           IKSEAVLRIME+LELPFPQLALF+QFVPLFVRN VYDNIADNRY LFGRSESCEI
Sbjct: 130 IKSEAVLRIMEYLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI 184

[Close]

BLAST of Tan0016870 vs. ExPASy TrEMBL
Match: A0A5D3E0H0 (DCC family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001690 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.6e-76
Identity = 152/176 (86.36%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 1   MALRLSGGVPASLVPPS-RAQARTRHSMAFASLSPATKDETIDWVEATSDFFGKDTRPIM 60
           MAL LSG  PA  +PPS R      H +A ASLSP TKDETIDWVEATSDFF KDTRPIM
Sbjct: 10  MALPLSGRFPAPFLPPSMRKAGMLLHPIASASLSPITKDETIDWVEATSDFFEKDTRPIM 69

Query: 61  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRS 120
           LFDGVCNLCNGGVRFVRANDRNRRIRLEALQS+AGKKLLRRSGRAPDDISSVVLVEKDRS
Sbjct: 70  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSDAGKKLLRRSGRAPDDISSVVLVEKDRS 129

Query: 121 YIKSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           YIKSEAVLRIME+LELPFPQLA F+QFVPLFVRN VYDNIADNRY LFGRSESCEI
Sbjct: 130 YIKSEAVLRIMEYLELPFPQLAFFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI 185

[Close]

BLAST of Tan0016870 vs. TAIR 10
Match: AT1G52590.1 (Putative thiol-disulphide oxidoreductase DCC )

HSP 1 Score: 228.0 bits (580), Expect = 5.8e-60
Identity = 118/171 (69.01%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 9   VPAS---LVPPSRAQARTRHSMAFASLSPAT-KDETIDWVEATSDFFGKDTRPIMLFDGV 68
           +PAS   L   SRAQ R R S   AS +  T + +++DWV+ TS FF +D RPIMLFDGV
Sbjct: 5   IPASFGRLTITSRAQVRVRVS---ASANQRTIRRDSVDWVKETSSFFEEDKRPIMLFDGV 64

Query: 69  CNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSE 128
           CNLCNGGV+FVR +DRNR IR EALQSEAGKKLL RSGRAPDDISSVVLVE DRSYIKSE
Sbjct: 65  CNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRSYIKSE 124

Query: 129 AVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESCEI 176
           AVL+IM++++LPFPQLA F+QF PLFVR+F+Y+N+A+NRY +FGRS+SCE+
Sbjct: 125 AVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172

[Close]

BLAST of Tan0016870 vs. TAIR 10
Match: AT1G24095.1 (Putative thiol-disulphide oxidoreductase DCC )

HSP 1 Score: 81.6 bits (200), Expect = 6.7e-16
Identity = 44/118 (37.29%), Postives = 71/118 (60.17%), Query Frame = 0


Query: 58  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKD 117
           ++++DGVC+LC+GGV+++   D+ R+I+   LQS+A +  L  SG   +D+    L  + 
Sbjct: 75  VVVYDGVCHLCHGGVKWIIKADKYRKIKFCCLQSKAAEPYLEVSGVTREDVQKRFLFIEG 134

Query: 118 RSYI--KSEAVLRIMEHLELPFPQLALFIQFVPLFVRNFVYDNIADNRYRLFGRSESC 174
             +    S A LR++ +L LP+  L  F   VP  +R+ VYD +A NRY  FG++E C
Sbjct: 135 LGFYHQASTAALRVVSYLPLPYSALNAF-SIVPTPLRDSVYDYVAKNRYDWFGKAEDC 191

The following BLAST results are available for this feature:

BLAST of Tan0016870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSR1	8.1e-59	69.01	DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
P40761	3.3e-20	43.97	Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) OX=224308 GN=yuxK...	[more]

BLAST of Tan0016870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153577.1	9.5e-81	87.43	DCC family protein At1g52590, chloroplastic [Momordica charantia]	[more]
XP_038900615.1	1.2e-80	89.71	DCC family protein At1g52590, chloroplastic [Benincasa hispida]	[more]
XP_023527546.1	1.4e-76	87.43	DCC family protein At1g52590, chloroplastic, partial [Cucurbita pepo subsp. pepo...	[more]
XP_022980169.1	1.4e-76	87.43	DCC family protein At1g52590, chloroplastic [Cucurbita maxima]	[more]
XP_022955810.1	2.4e-76	86.86	DCC family protein At1g52590, chloroplastic [Cucurbita moschata]	[more]

BLAST of Tan0016870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJB0	4.6e-81	87.43	DCC family protein At1g52590, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1IYJ5	6.9e-77	87.43	DCC family protein At1g52590, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GW36	1.2e-76	86.86	DCC family protein At1g52590, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A0A0KVF0	2.0e-76	86.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004930 PE=4 SV=1	[more]
A0A5D3E0H0	7.6e-76	86.36	DCC family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0...	[more]

BLAST of Tan0016870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52590.1	5.8e-60	69.01	Putative thiol-disulphide oxidoreductase DCC	[more]
AT1G24095.1	6.7e-16	37.29	Putative thiol-disulphide oxidoreductase DCC	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007263	DCC1-like thiol-disulfide oxidoreductase family	PFAM	PF04134	DUF393	coord: 60..169 e-value: 1.1E-29 score: 104.1
None	No IPR available	PANTHER	PTHR33639:SF2	THIOL-DISULFIDE OXIDOREDUCTASE DCC	coord: 15..175
None	No IPR available	PANTHER	PTHR33639	THIOL-DISULFIDE OXIDOREDUCTASE DCC	coord: 15..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016870.1	Tan0016870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0015035	protein-disulfide reductase activity