Tan0016868 (gene) Snake gourd v1

Overview


Name	Tan0016868
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	photosystem II 22 kDa protein, chloroplastic-like
Location	LG11: 10937343 .. 10940565 (+)
RNA-Seq Expression	Tan0016868
Synteny	Tan0016868

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAAGGTTTAAGACAAAAACCAAAAGGAAAACCGTACTCACTCACCAATCCACCATCACAAAAATTAAACGACGACGTGTCACTTTATTCGCCGATCGTTAAAATCTCCCACCCAAATCCACACGCACATCCCCTTCCACCATACACTCAAAATCCCTCTGTTTCTCAAATCCTTCTTCTTAAAAACCCATCGAAATCACTCCGCCATTTGCTAGAGCTTTAACAATCTCCCTCTCCCCTGCATTAAATCCAGTCAAAAGCTTAGCATCCATGGCGGCTCAAACCATGCTTCTTTCCTCCGGTGTGTGCGCCGGCCACGGCGTCGGCGTGAAGAGAGAAATCGCTTCGTTAACGCAGAGGCTTAGACCTAACGCTCAATTTAGTCGTTTGTTTTTCCATCCTTTGCCTTCGAATTCGGTTTCTTCGCCGGCGCGTGGATTTCGGACTCTTGCGGTTTTTAAATCGAGGACGAAAGTGCCGACGAAGAAGGTAATTATTCTTCTTTTTTAAAGAGGAATTGATGGATTAATTTTGAGAAATTGATTTGAGGTTTTCTGGTTTGGATTTTAGGTTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGAACGTCTGGTGGCATTGGTTTCACTAAGCAGAATGAACTCTTTGTTGGCCGTGTCGCCATGATCGGCTTTGCTGTGAGTTCTTTTTGCGCGCTTTCCTCTTTGAATTTCCTCGTTTTAACTGGTTAAGAAAACGAAGAAGCTTGAATTAGAAATGTATGGATCTGTGTTTATTATTATTATAAATTTTAAAATTATAGAGTTATATTCCTATGTAATAATTATAGTTGAACAATTACACATCTACTTTATTTTGAACATCACATTTATTGTGCAGGACTAAAAAATACTATTACATTTGTTAAATAAAAACTAATCAATTTCATTTAATGTTATAGATAAGGTGATGTACTACATTTGTTGTTTCAAAACCCTATCACATTGTTTAATTTGTTTTAATTGTCTACTCTCGATTATTTATGTTATGATTTTGTAGCCAGCTTTTTTTGTCAATAAATATTTTAAGGTTTAAGTATGATTTTGGTCAGGTGCTTTGATCATAGTTCAATTTTGGTCCCTAACTTTCAATAATACTTAAAATTAGTCATTACTATTATTTTATTGATAATTTTTCTTTTAAAAAATAGTATCTCTTAACTTTTTTTCTACAAATTTAGATAGTATGTTCACATTGTGTATTTTGTTGTATTGAAATTATTATTATTATGTAATTAACTTTTTAAAAAATTAACTTTAGATTAATTATAGGGAGCAATTTTAAGATTTATTAAAAGTACAAAGACTAAAATTATATATTTGAAAGAGAATGAGACTAAATCTTATTTTAATTAATGATTTTTATCTTTTGTCTCTTTAAGTTCAAATTCCACTCATTTGTATGGTAATATTCTTATTAGAAAAAAGGTTATATTGTTCAAACTTCAAAGTGGTTAAAAACCTTTTTTAATTTTAAGAAATACAATCAAAATGCATACATTTATAATTTACTCAAACAAAACATATCGTTCTCTCCACATTATCTTGGGGAGAAACATCTAAATAAAAAAAGATAATAGCTTGAACTAAATTTATTATTTACATAAACATGTTGTTCTCCTCAGCCAAGTAATAACCTGAAGTTCTAATTGAACTATACCGAGGTTGAGTTAGTATTCATGTTGTTCTCCTCAATCATGTCATTCTCTTCGCAGTTTACTTGGTTTTTGAAGATTTAGTCTATAAATATTACTTTCACTTATAGGTTTTCTAGCTTTGTTATCTACTTCTTAACTAAATTTTCAAATATCAGGCCAAGTTTTGAAAAGTAAAAAGGACATTTTTTTATTATTTTTAGAGTTTGGCTAAGAGTTCAAATCTTTCATTTAGAAAGAGGAAACCTATGGTAGAGAAATTGCAATAAAACAAAAAATCAAATAGTTATCAAATAGAGATTTAGTTTTCAAATCTTGGCTTAATTTTTTAAAACACAAATAAAAAAGTAGATAACAAAACAAAGAAACTTGTGAGCATAATTTATAAAGTTAATTTTCAGAAACTAGAAACTAAAATTTACATTTAAAAGTGTAAAACCATATATTAAAATGGTTACAAGAAAAATACTCTATGAACAAATATTTTTACTCCCATTACTATTTCTAAAATTAGTATCAAATATTCTTAATACTATTTTTTTCTTTTTAATATAATTGGGATGGGAGATCCGAAGAACAAGCCTCGTGGTTAACACATTTGTCTATGCTCCTTTTTACAATATTCCTAAGACTATCAACAAATCGATTATGGCACAAAATGTCTTGCCCTTCCCTAGAATGGGTGAAAATCATTATAAAACTAACTCGAATTTTGAGGTGTGAATCATGTGTGTAAATTTTGCAGGCGTCTTTGCTAGGAGAGGGAATCACCGGAAAGGGAATTCTAGCGCAACTGAATTTAGAAACTGGAGTTCCGATTTACGAGGCCGAGCCTCTTCTTCTGTTTTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCGGAACCAGCCACCGGACTGGATCGCGCCGTCATCCCTCCCGGAAAGGGCTTCAGATCGGCGCTAGGTCTCAAAGAAGGAGGTAAATTACTTACACTACAGTACAATCGATGTCATTGTTCAATTAGACACTCGATAAATGATCAAATCTTACATCAAATTCATGACGGCCCTGTTTTATGAAGGTCCGTTGTTTGGATTCACGAAGGCAAATGAACTGTTCGTCGGCAGATTGGCGCAGCTAGGGTTTGCGTTCTCGCTGATCGGAGAAATCATTACAGGAAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGTGCCGATCAATGAAATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCTGCAGTGAATCCTGGAACTGGTAAATTTGTGACGGACGAGGAAGATGATGAATGAACGGATCGACTCTACTTTAATTTCTCTGTACATGAACTTAGCAAATCCGCATATTTCGCTTCAAGCTTGTGCTATTGTAACGTATTTATTTTGGTTGAGCACCCAAAACAACGAAATCTATGGAACAAACTTTGGCTAGTGAATTGTAGGAAACATGAGTTCTTTTTTGCTTCTTT

mRNA sequence

GTTAAGGTTTAAGACAAAAACCAAAAGGAAAACCGTACTCACTCACCAATCCACCATCACAAAAATTAAACGACGACGTGTCACTTTATTCGCCGATCGTTAAAATCTCCCACCCAAATCCACACGCACATCCCCTTCCACCATACACTCAAAATCCCTCTGTTTCTCAAATCCTTCTTCTTAAAAACCCATCGAAATCACTCCGCCATTTGCTAGAGCTTTAACAATCTCCCTCTCCCCTGCATTAAATCCAGTCAAAAGCTTAGCATCCATGGCGGCTCAAACCATGCTTCTTTCCTCCGGTGTGTGCGCCGGCCACGGCGTCGGCGTGAAGAGAGAAATCGCTTCGTTAACGCAGAGGCTTAGACCTAACGCTCAATTTAGTCGTTTGTTTTTCCATCCTTTGCCTTCGAATTCGGTTTCTTCGCCGGCGCGTGGATTTCGGACTCTTGCGGTTTTTAAATCGAGGACGAAAGTGCCGACGAAGAAGGTTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGAACGTCTGGTGGCATTGGTTTCACTAAGCAGAATGAACTCTTTGTTGGCCGTGTCGCCATGATCGGCTTTGCTGCGTCTTTGCTAGGAGAGGGAATCACCGGAAAGGGAATTCTAGCGCAACTGAATTTAGAAACTGGAGTTCCGATTTACGAGGCCGAGCCTCTTCTTCTGTTTTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCGGAACCAGCCACCGGACTGGATCGCGCCGTCATCCCTCCCGGAAAGGGCTTCAGATCGGCGCTAGGTCTCAAAGAAGGAGGTCCGTTGTTTGGATTCACGAAGGCAAATGAACTGTTCGTCGGCAGATTGGCGCAGCTAGGGTTTGCGTTCTCGCTGATCGGAGAAATCATTACAGGAAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGTGCCGATCAATGAAATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCTGCAGTGAATCCTGGAACTGGTAAATTTGTGACGGACGAGGAAGATGATGAATGAACGGATCGACTCTACTTTAATTTCTCTGTACATGAACTTAGCAAATCCGCATATTTCGCTTCAAGCTTGTGCTATTGTAACGTATTTATTTTGGTTGAGCACCCAAAACAACGAAATCTATGGAACAAACTTTGGCTAGTGAATTGTAGGAAACATGAGTTCTTTTTTGCTTCTTT

Coding sequence (CDS)

ATGGCGGCTCAAACCATGCTTCTTTCCTCCGGTGTGTGCGCCGGCCACGGCGTCGGCGTGAAGAGAGAAATCGCTTCGTTAACGCAGAGGCTTAGACCTAACGCTCAATTTAGTCGTTTGTTTTTCCATCCTTTGCCTTCGAATTCGGTTTCTTCGCCGGCGCGTGGATTTCGGACTCTTGCGGTTTTTAAATCGAGGACGAAAGTGCCGACGAAGAAGGTTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGAACGTCTGGTGGCATTGGTTTCACTAAGCAGAATGAACTCTTTGTTGGCCGTGTCGCCATGATCGGCTTTGCTGCGTCTTTGCTAGGAGAGGGAATCACCGGAAAGGGAATTCTAGCGCAACTGAATTTAGAAACTGGAGTTCCGATTTACGAGGCCGAGCCTCTTCTTCTGTTTTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCGGAACCAGCCACCGGACTGGATCGCGCCGTCATCCCTCCCGGAAAGGGCTTCAGATCGGCGCTAGGTCTCAAAGAAGGAGGTCCGTTGTTTGGATTCACGAAGGCAAATGAACTGTTCGTCGGCAGATTGGCGCAGCTAGGGTTTGCGTTCTCGCTGATCGGAGAAATCATTACAGGAAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGTGCCGATCAATGAAATTGAGCCTCTGGTTTTGTTGAATGTTGTGTTCTTCTTCATTGCTGCAGTGAATCCTGGAACTGGTAAATTTGTGACGGACGAGGAAGATGATGAATGA

Protein sequence

MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

Homology

[Close]

BLAST of Tan0016868 vs. ExPASy Swiss-Prot
Match: Q02060 (Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBS PE=1 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 4.2e-110
Identity = 210/278 (75.54%), Postives = 240/278 (86.33%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKRE--IASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFR 60
           MA   +L+  GV   + + +KR   +    Q+++P +  S LFF PLPS+S SS +  F+
Sbjct: 1   MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPKSSTSNLFFSPLPSSS-SSSSTVFK 60

Query: 61  TLAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEG 120
           TLA+FKS+ K P KKV KPK KVEDG+FGTSGGIGFTK+NELFVGRVAMIGFAASLLGEG
Sbjct: 61  TLALFKSKAKAP-KKVEKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEG 120

Query: 121 ITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAV 180
           ITGKGIL+QLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGL++AV
Sbjct: 121 ITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVD--EPTTGLEKAV 180

Query: 181 IPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 240
           IPPGK  RSALGLK  GPLFGFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET
Sbjct: 181 IPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 240

Query: 241 GVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           GVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E+++
Sbjct: 241 GVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEED 274

[Close]

BLAST of Tan0016868 vs. ExPASy Swiss-Prot
Match: Q9SMB4 (Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBS PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.3e-106
Identity = 211/280 (75.36%), Postives = 230/280 (82.14%), Query Frame = 0


Query: 3   AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHP-----LPSNSVSSPAR-G 62
           AQTMLL++           R   SL +RL+P    S  FF P      PS S S+ +   
Sbjct: 2   AQTMLLTANAKVD-----LRSKESLVERLKPKPLSS--FFLPSLPLKYPSASASASSHFT 61

Query: 63  FRTLAVFKSRTKVPTKKVV-KPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 122
             T+A+FKS+ K P KKVV KPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL
Sbjct: 62  STTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 121

Query: 123 GEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLD 182
           GE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGLD
Sbjct: 122 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLD 181

Query: 183 RAVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLN 242
           +AVIPPGKGF+SALGL EGGPLF FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN
Sbjct: 182 KAVIPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 241

Query: 243 IETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
            ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Sbjct: 242 FETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274

[Close]

BLAST of Tan0016868 vs. ExPASy Swiss-Prot
Match: P54773 (Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBS PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.7e-106
Identity = 207/281 (73.67%), Postives = 226/281 (80.43%), Query Frame = 0


Query: 3   AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLP------SNSVSSPARG 62
           AQTMLL++           R   SL +RL+P    S LF   LP      S + SS    
Sbjct: 2   AQTMLLTANAKVD-----LRSKESLVERLKPK-PLSSLFLPSLPLRFSSSSTNASSSKFT 61

Query: 63  FRTLAVFKSRTKVPTKKVVKPKE--KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 122
             T+A+FKS+ K P KKV  PKE  KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL
Sbjct: 62  STTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 121

Query: 123 LGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL 182
           LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGL
Sbjct: 122 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGL 181

Query: 183 DRAVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQL 242
           ++AVIPPGK F+SALGL EGGPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQL
Sbjct: 182 EKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQL 241

Query: 243 NIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           N ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Sbjct: 242 NFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

[Close]

BLAST of Tan0016868 vs. ExPASy Swiss-Prot
Match: Q9FPP4 (Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN=PSBS PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.8e-106
Identity = 207/281 (73.67%), Postives = 227/281 (80.78%), Query Frame = 0


Query: 3   AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLP------SNSVSSPARG 62
           AQTMLL++           R   SL +RL+P    S LF   LP      + + SS    
Sbjct: 2   AQTMLLTANAKVD-----LRSKESLVERLKPK-PLSSLFLPSLPLRFSSSTTNFSSSKFT 61

Query: 63  FRTLAVFKSRTKVPTKKVVKPKE--KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 122
             T+A+FKS+ K P KKV  PKE  KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL
Sbjct: 62  STTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 121

Query: 123 LGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL 182
           LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGL
Sbjct: 122 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDDPAPATGL 181

Query: 183 DRAVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQL 242
           ++AVIPPGK F+SALGL EGGPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQL
Sbjct: 182 EKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQL 241

Query: 243 NIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           N ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Sbjct: 242 NFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

[Close]

BLAST of Tan0016868 vs. ExPASy Swiss-Prot
Match: Q9XF91 (Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBS PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 8.5e-103
Identity = 200/273 (73.26%), Postives = 221/273 (80.95%), Query Frame = 0


Query: 3   AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAV 62
           AQTMLL+SGV AGH +  K  +A          +   LF       ++ S  + F  LA+
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA--------QPKVHHLFLSGNSPVALPSRRQSFVPLAL 61

Query: 63  FKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGK 122
           FK +TK   KKV KPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +TGK
Sbjct: 62  FKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGK 121

Query: 123 GILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPG 182
           GILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGL++AVIPPG
Sbjct: 122 GILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIPPG 181

Query: 183 KGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPI 242
           K  RSALGLKE GPLFGFTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI
Sbjct: 182 KNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPI 241

Query: 243 NEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
            +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Sbjct: 242 QDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

[Close]

BLAST of Tan0016868 vs. NCBI nr
Match: XP_022952982.1 (photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata] >XP_023545993.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7032798.1 Photosystem II 22 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 510.4 bits (1313), Expect = 9.9e-141
Identity = 260/275 (94.55%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTL 60
           MAAQTM+LSSGVCA HGV +KREIASLTQRLRPNAQFSRLFF+PLPS+SVS PARGFRTL
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTL 60

Query: 61  AVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           A+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
Sbjct: 61  AIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120

Query: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIP 180
           GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240
           PGKG RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 PINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of Tan0016868 vs. NCBI nr
Match: XP_022991058.1 (photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 505.8 bits (1301), Expect = 2.4e-139
Identity = 258/275 (93.82%), Postives = 268/275 (97.45%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTL 60
           MAAQTM+LSSGVCA HGV +KREIASLT+RLRPNAQ SRLFF+PLPS+SVS PARGFRTL
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTRRLRPNAQSSRLFFNPLPSSSVSLPARGFRTL 60

Query: 61  AVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           A+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
Sbjct: 61  AIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120

Query: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIP 180
           GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240
           PGKG RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 PINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of Tan0016868 vs. NCBI nr
Match: KAG6602094.1 (Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 501.5 bits (1290), Expect = 4.6e-138
Identity = 255/270 (94.44%), Postives = 264/270 (97.78%), Query Frame = 0


Query: 6   MLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAVFKS 65
           M+LSSGVCA HGV +KREIASLTQRLRPNAQFSRLFF+PLPS+SVS PARGFRTLA+FKS
Sbjct: 1   MVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKS 60

Query: 66  RTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 125
           + KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL
Sbjct: 61  KAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 120

Query: 126 AQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPGKGF 185
           AQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIPPGKG 
Sbjct: 121 AQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGL 180

Query: 186 RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEI 245
           RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEI
Sbjct: 181 RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEI 240

Query: 246 EPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           EPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 EPLVLLNVLFFFIAAVNPGTGKFVTDEEED 270

[Close]

BLAST of Tan0016868 vs. NCBI nr
Match: XP_038885143.1 (photosystem II 22 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 257/276 (93.12%), Postives = 263/276 (95.29%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTL 60
           MAAQTMLL+SGVC GHGVGVKRE+     RLRPNAQFSRLFF+PLPS+SVS PARGF TL
Sbjct: 1   MAAQTMLLTSGVCVGHGVGVKREL-----RLRPNAQFSRLFFNPLPSHSVSLPARGFTTL 60

Query: 61  AVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           AVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE IT
Sbjct: 61  AVFKSRTKAPPKKVSKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAIT 120

Query: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIP 180
           GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240
           PGK FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKNFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 271

[Close]

BLAST of Tan0016868 vs. NCBI nr
Match: XP_004150442.1 (photosystem II 22 kDa protein, chloroplastic [Cucumis sativus] >KAE8647273.1 hypothetical protein Csa_018297 [Cucumis sativus])

HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-131
Identity = 249/277 (89.89%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPN-AQFSRLFFHPLPSNSVSSPARGFRT 60
           MAAQTMLL+SGVC GHGV +KRE++     LRPN  QF+RLFF+PLPS+SVS P RGF T
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTT 60

Query: 61  LAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS+LGE I
Sbjct: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAI 120

Query: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of Tan0016868 vs. ExPASy TrEMBL
Match: A0A6J1GLX6 (photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455493 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 4.8e-141
Identity = 260/275 (94.55%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTL 60
           MAAQTM+LSSGVCA HGV +KREIASLTQRLRPNAQFSRLFF+PLPS+SVS PARGFRTL
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTL 60

Query: 61  AVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           A+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
Sbjct: 61  AIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120

Query: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIP 180
           GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240
           PGKG RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 PINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of Tan0016868 vs. ExPASy TrEMBL
Match: A0A6J1JV31 (photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487764 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 258/275 (93.82%), Postives = 268/275 (97.45%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTL 60
           MAAQTM+LSSGVCA HGV +KREIASLT+RLRPNAQ SRLFF+PLPS+SVS PARGFRTL
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTRRLRPNAQSSRLFFNPLPSSSVSLPARGFRTL 60

Query: 61  AVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           A+FKS+ KVP KKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
Sbjct: 61  AIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120

Query: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIP 180
           GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240
           PGKG RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 PINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of Tan0016868 vs. ExPASy TrEMBL
Match: A0A0A0K7N4 (Photosystem II protein OS=Cucumis sativus OX=3659 GN=Csa_7G267900 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.3e-132
Identity = 249/277 (89.89%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRPN-AQFSRLFFHPLPSNSVSSPARGFRT 60
           MAAQTMLL+SGVC GHGV +KRE++     LRPN  QF+RLFF+PLPS+SVS P RGF T
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTT 60

Query: 61  LAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS+LGE I
Sbjct: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAI 120

Query: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of Tan0016868 vs. ExPASy TrEMBL
Match: A0A5A7UZ08 (Photosystem II 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00970 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131
Identity = 249/277 (89.89%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRP-NAQFSRLFFHPLPSNSVSSPARGFRT 60
           MAAQTMLL+SGVC GHGV +KRE++     LRP N QF+RLFF+PLP++SVS PARGF  
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTP 60

Query: 61  LAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE I
Sbjct: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120

Query: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of Tan0016868 vs. ExPASy TrEMBL
Match: A0A1S3CS23 (photosystem II 22 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504056 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131
Identity = 249/277 (89.89%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCAGHGVGVKREIASLTQRLRP-NAQFSRLFFHPLPSNSVSSPARGFRT 60
           MAAQTMLL+SGVC GHGV +KRE++     LRP N QF+RLFF+PLP++SVS PARGF  
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTP 60

Query: 61  LAVFKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LAVFKSRTK P KKV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE I
Sbjct: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120

Query: 121 TGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVI 180
           TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL+RAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240
           PPGK FRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of Tan0016868 vs. TAIR 10
Match: AT1G44575.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 374.8 bits (961), Expect = 6.0e-104
Identity = 200/273 (73.26%), Postives = 221/273 (80.95%), Query Frame = 0


Query: 3   AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAV 62
           AQTMLL+SGV AGH +  K  +A          +   LF       ++ S  + F  LA+
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA--------QPKVHHLFLSGNSPVALPSRRQSFVPLAL 61

Query: 63  FKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGK 122
           FK +TK   KKV KPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +TGK
Sbjct: 62  FKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGK 121

Query: 123 GILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPG 182
           GILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGL++AVIPPG
Sbjct: 122 GILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIPPG 181

Query: 183 KGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPI 242
           K  RSALGLKE GPLFGFTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI
Sbjct: 182 KNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPI 241

Query: 243 NEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
            +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Sbjct: 242 QDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

[Close]

BLAST of Tan0016868 vs. TAIR 10
Match: AT1G44575.2 (Chlorophyll A-B binding family protein )

HSP 1 Score: 240.0 bits (611), Expect = 2.3e-63
Identity = 133/193 (68.91%), Postives = 147/193 (76.17%), Query Frame = 0


Query: 3   AQTMLLSSGVCAGHGVGVKREIASLTQRLRPNAQFSRLFFHPLPSNSVSSPARGFRTLAV 62
           AQTMLL+SGV AGH +  K  +A          +   LF       ++ S  + F  LA+
Sbjct: 2   AQTMLLTSGVTAGHFLRNKSPLA--------QPKVHHLFLSGNSPVALPSRRQSFVPLAL 61

Query: 63  FKSRTKVPTKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGK 122
           FK +TK   KKV KPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +TGK
Sbjct: 62  FKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGK 121

Query: 123 GILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLDRAVIPPG 182
           GILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGL++AVIPPG
Sbjct: 122 GILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIPPG 181

Query: 183 KGFRSALGLKEGG 196
           K  RSALGLKE G
Sbjct: 182 KNVRSALGLKEQG 184

The following BLAST results are available for this feature:

BLAST of Tan0016868 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q02060	4.2e-110	75.54	Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSB...	[more]
Q9SMB4	1.3e-106	75.36	Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSB...	[more]
P54773	3.7e-106	73.67	Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=...	[more]
Q9FPP4	4.8e-106	73.67	Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN...	[more]
Q9XF91	8.5e-103	73.26	Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Tan0016868 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952982.1	9.9e-141	94.55	photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata] >XP_02354...	[more]
XP_022991058.1	2.4e-139	93.82	photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
KAG6602094.1	4.6e-138	94.44	Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma su...	[more]
XP_038885143.1	1.1e-136	93.12	photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_004150442.1	1.1e-131	89.89	photosystem II 22 kDa protein, chloroplastic [Cucumis sativus] >KAE8647273.1 hyp...	[more]

BLAST of Tan0016868 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLX6	4.8e-141	94.55	photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JV31	1.2e-139	93.82	photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0K7N4	5.3e-132	89.89	Photosystem II protein OS=Cucumis sativus OX=3659 GN=Csa_7G267900 PE=4 SV=1	[more]
A0A5A7UZ08	1.5e-131	89.89	Photosystem II 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CS23	1.5e-131	89.89	photosystem II 22 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of Tan0016868 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44575.1	6.0e-104	73.26	Chlorophyll A-B binding family protein	[more]
AT1G44575.2	2.3e-63	68.91	Chlorophyll A-B binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 90..220 e-value: 3.0E-8 score: 34.4
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 59..138 e-value: 1.5E-5 score: 27.1
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 139..246 e-value: 1.1E-6 score: 30.7
None	No IPR available	PANTHER	PTHR14154:SF74	PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC	coord: 3..187
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 3..187
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 198..261
None	No IPR available	PANTHER	PTHR14154:SF74	PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC	coord: 198..261
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 79..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016868.1	Tan0016868.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding