Tan0016714 (gene) Snake gourd v1

Overview
NameTan0016714
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHistone H2B
LocationLG05: 2676285 .. 2676824 (+)
RNA-Seq ExpressionTan0016714
SyntenyTan0016714
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTCATCGCATCGTCTTCAGTACAGATCGTCAAAACTTTCAATCGTTTCCCACTCTCTAAACCGACAATTCAATTTCCAATGGCACCAAAGGCCGAGAAGAAACCCGCCGAGAAGAAGCCAGCCTCCGACAAACCGGCGGAGGAGAAGAAGAGCGTAGCCGAGAAAGCCCCGGCGGAGAAGAAGCCCAAGGCTGGCAAGAAGTTGCCCAAGGAAGGCGGCGCCGCCGCCGGAGACAAGAAGAAGAAGAGAATGAAGAAGAGCGTAGAGACATACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCAGACATCGGAATCTCCAGCAAGGCCATGGGAATCATGAACAGCTTCATCAACGATATCTTCGAGAAGCTTGCTCAGGAGTCTTCTAAGTTGGCTCGTTATAACAAGAAGCCAACTATTACTTCCAGGGAGATTCAAACGGCTGTGAGGCTTGTTCTTCCCGGTGAATTGGCCAAACACGCCGTTTCTGAAGGTACAAAGGCGGTGACGAAATTCACAAGTTCTTAA

mRNA sequence

ATTCTCATCGCATCGTCTTCAGTACAGATCGTCAAAACTTTCAATCGTTTCCCACTCTCTAAACCGACAATTCAATTTCCAATGGCACCAAAGGCCGAGAAGAAACCCGCCGAGAAGAAGCCAGCCTCCGACAAACCGGCGGAGGAGAAGAAGAGCGTAGCCGAGAAAGCCCCGGCGGAGAAGAAGCCCAAGGCTGGCAAGAAGTTGCCCAAGGAAGGCGGCGCCGCCGCCGGAGACAAGAAGAAGAAGAGAATGAAGAAGAGCGTAGAGACATACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCAGACATCGGAATCTCCAGCAAGGCCATGGGAATCATGAACAGCTTCATCAACGATATCTTCGAGAAGCTTGCTCAGGAGTCTTCTAAGTTGGCTCGTTATAACAAGAAGCCAACTATTACTTCCAGGGAGATTCAAACGGCTGTGAGGCTTGTTCTTCCCGGTGAATTGGCCAAACACGCCGTTTCTGAAGGTACAAAGGCGGTGACGAAATTCACAAGTTCTTAA

Coding sequence (CDS)

ATGGCACCAAAGGCCGAGAAGAAACCCGCCGAGAAGAAGCCAGCCTCCGACAAACCGGCGGAGGAGAAGAAGAGCGTAGCCGAGAAAGCCCCGGCGGAGAAGAAGCCCAAGGCTGGCAAGAAGTTGCCCAAGGAAGGCGGCGCCGCCGCCGGAGACAAGAAGAAGAAGAGAATGAAGAAGAGCGTAGAGACATACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCAGACATCGGAATCTCCAGCAAGGCCATGGGAATCATGAACAGCTTCATCAACGATATCTTCGAGAAGCTTGCTCAGGAGTCTTCTAAGTTGGCTCGTTATAACAAGAAGCCAACTATTACTTCCAGGGAGATTCAAACGGCTGTGAGGCTTGTTCTTCCCGGTGAATTGGCCAAACACGCCGTTTCTGAAGGTACAAAGGCGGTGACGAAATTCACAAGTTCTTAA

Protein sequence

MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Homology
BLAST of Tan0016714 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 253.1 bits (645), Expect = 2.1e-66
Identity = 143/152 (94.08%), Postives = 147/152 (96.71%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKAEKKPAEK     KPAEEKK+VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKR+KK
Sbjct: 1   MAPKAEKKPAEK-----KPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147

BLAST of Tan0016714 vs. ExPASy Swiss-Prot
Match: Q1S9I9 (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-64
Identity = 139/152 (91.45%), Postives = 144/152 (94.74%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPK EKKPAEKKPA +K    K +VAEKAPAEKKPKAGKKLPKEGG+AAG+KKKKR KK
Sbjct: 1   MAPKGEKKPAEKKPAEEK----KSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

BLAST of Tan0016714 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 245.7 bits (626), Expect = 3.3e-64
Identity = 142/152 (93.42%), Postives = 144/152 (94.74%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKAEKKPAEKKPAS+KP EE KS AEKAPAEKKPKAGKKLPKE G A GDKKKK  KK
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEE-KSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

BLAST of Tan0016714 vs. ExPASy Swiss-Prot
Match: Q1SWQ1 (Probable histone H2B.2 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-63
Identity = 137/152 (90.13%), Postives = 142/152 (93.42%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPK EKKPAEKKPA +K    K +VAEKAPAEKKPKAGKKLPKEGG+AAG+KKKKR KK
Sbjct: 1   MAPKGEKKPAEKKPAEEK----KSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL QESS+LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKH VSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHDVSEGTKAVTKFTSS 148

BLAST of Tan0016714 vs. ExPASy Swiss-Prot
Match: O23629 (Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3)

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-63
Identity = 140/152 (92.11%), Postives = 143/152 (94.08%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAP+AEKKPAEKKPA++KP EE KS AEKAPAEKKPKAGKKLPKE G A GDKKKK  KK
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEE-KSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

BLAST of Tan0016714 vs. NCBI nr
Match: XP_008448382.1 (PREDICTED: histone H2B [Cucumis melo] >KAA0061943.1 histone H2B [Cucumis melo var. makuwa] >TYK23986.1 histone H2B [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKA+KKPAEKKPASDKPAEEKK+VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK
Sbjct: 1   MAPKADKKPAEKKPASDKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. NCBI nr
Match: XP_038900415.1 (histone H2B [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPK++KKPAEKKPASDKPAEEKK+VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKR KK
Sbjct: 1   MAPKSDKKPAEKKPASDKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRTKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. NCBI nr
Match: XP_004143093.1 (histone H2B [Cucumis sativus] >KGN47176.1 hypothetical protein Csa_020799 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKA+KKPAEKKPAS+KPAEEKK+VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKR KK
Sbjct: 1   MAPKADKKPAEKKPASEKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRTKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. NCBI nr
Match: XP_028052986.1 (histone H2B-like [Camellia sinensis])

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-67
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKAEKKPAEKKPAS+KPAEEKK+VAEK PAEKKPKAGKKLPKEGGAAAGDKKKKR KK
Sbjct: 1   MAPKAEKKPAEKKPASEKPAEEKKTVAEKTPAEKKPKAGKKLPKEGGAAAGDKKKKRTKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. NCBI nr
Match: XP_023533056.1 (histone H1-II-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 6.8e-67
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKAEKKPAEKKPA++KPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAA DKKKKR KK
Sbjct: 165 MAPKAEKKPAEKKPAAEKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAVDKKKKRSKK 224

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 225 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 284

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 285 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 316

BLAST of Tan0016714 vs. ExPASy TrEMBL
Match: A0A5D3DK48 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00500 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKA+KKPAEKKPASDKPAEEKK+VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK
Sbjct: 1   MAPKADKKPAEKKPASDKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. ExPASy TrEMBL
Match: A0A1S3BIZ0 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103490588 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKA+KKPAEKKPASDKPAEEKK+VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK
Sbjct: 1   MAPKADKKPAEKKPASDKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. ExPASy TrEMBL
Match: A0A0A0KHC9 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_6G193620 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.6e-68
Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKA+KKPAEKKPAS+KPAEEKK+VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKR KK
Sbjct: 1   MAPKADKKPAEKKPASEKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRTKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. ExPASy TrEMBL
Match: A0A6P3ZH56 (Histone H2B OS=Ziziphus jujuba OX=326968 GN=LOC107411057 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 146/152 (96.05%), Postives = 150/152 (98.68%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKAEKKPAEKKPAS+KPAEEKK+VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKR KK
Sbjct: 1   MAPKAEKKPAEKKPASEKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRTKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. ExPASy TrEMBL
Match: A0A2P5BRL4 (Histone H2B OS=Trema orientale OX=63057 GN=TorRG33x02_311120 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.3e-67
Identity = 145/152 (95.39%), Postives = 150/152 (98.68%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKAEKKPAEKKPAS+KPAEEKK+VAEKAPAEKKPKAGKKLPKEGGA AGDKKKKR+KK
Sbjct: 1   MAPKAEKKPAEKKPASEKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAGAGDKKKKRVKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 152

BLAST of Tan0016714 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-65
Identity = 142/152 (93.42%), Postives = 144/152 (94.74%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKAEKKPAEKKPAS+KP EE KS AEKAPAEKKPKAGKKLPKE G A GDKKKK  KK
Sbjct: 1   MAPKAEKKPAEKKPASEKPVEE-KSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

BLAST of Tan0016714 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein )

HSP 1 Score: 242.7 bits (618), Expect = 2.0e-64
Identity = 140/152 (92.11%), Postives = 143/152 (94.08%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAP+AEKKPAEKKPA++KP EE KS AEKAPAEKKPKAGKKLPKE G A GDKKKK  KK
Sbjct: 1   MAPRAEKKPAEKKPAAEKPVEE-KSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

BLAST of Tan0016714 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-62
Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKA KKPAEKKPA   PAEE+K VAEKAPAEKKPKAGKKLPKE      +KKKKR+KK
Sbjct: 1   MAPKAGKKPAEKKPAEKAPAEEEK-VAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

BLAST of Tan0016714 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 5.4e-62
Identity = 137/152 (90.13%), Postives = 138/152 (90.79%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAPKAEKKPAEKKP       E+KS AEKAPAEKKPKAGKKLPKE G A GDKKKK  KK
Sbjct: 1   MAPKAEKKPAEKKPV------EEKSKAEKAPAEKKPKAGKKLPKEAG-AGGDKKKKMKKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSR
Sbjct: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

BLAST of Tan0016714 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 1.6e-61
Identity = 135/152 (88.82%), Postives = 142/152 (93.42%), Query Frame = 0

Query: 1   MAPKAEKKPAEKKPASDKPAEEKKSVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRMKK 60
           MAP+AEKKPAEKK A+++P EE K+ AEKAPAEKKPKAGKKLP +    AGDKKKKR KK
Sbjct: 1   MAPRAEKKPAEKKTAAERPVEENKA-AEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKK 60

Query: 61  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120
           +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR
Sbjct: 61  NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O225822.1e-6694.08Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3[more]
Q1S9I91.9e-6491.45Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
P402833.3e-6493.42Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5[more]
Q1SWQ12.8e-6390.13Probable histone H2B.2 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
O236292.8e-6392.11Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3[more]
Match NameE-valueIdentityDescription
XP_008448382.19.5e-6998.68PREDICTED: histone H2B [Cucumis melo] >KAA0061943.1 histone H2B [Cucumis melo va... [more]
XP_038900415.11.0e-6797.37histone H2B [Benincasa hispida][more]
XP_004143093.11.4e-6797.37histone H2B [Cucumis sativus] >KGN47176.1 hypothetical protein Csa_020799 [Cucum... [more]
XP_028052986.14.0e-6796.71histone H2B-like [Camellia sinensis][more]
XP_023533056.16.8e-6797.37histone H1-II-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A5D3DK484.6e-6998.68Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00500 PE... [more]
A0A1S3BIZ04.6e-6998.68Histone H2B OS=Cucumis melo OX=3656 GN=LOC103490588 PE=3 SV=1[more]
A0A0A0KHC96.6e-6897.37Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_6G193620 PE=3 SV=1[more]
A0A6P3ZH564.3e-6796.05Histone H2B OS=Ziziphus jujuba OX=326968 GN=LOC107411057 PE=3 SV=1[more]
A0A2P5BRL47.3e-6795.39Histone H2B OS=Trema orientale OX=63057 GN=TorRG33x02_311120 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G59910.12.3e-6593.42Histone superfamily protein [more]
AT3G45980.12.0e-6492.11Histone superfamily protein [more]
AT2G28720.11.8e-6289.47Histone superfamily protein [more]
AT3G46030.15.4e-6290.13Histone superfamily protein [more]
AT1G07790.11.6e-6188.82Histone superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 65..83
score: 80.55
coord: 84..104
score: 75.74
coord: 106..123
score: 76.51
coord: 123..136
score: 92.45
coord: 136..149
score: 92.65
IPR000558Histone H2BSMARTSM00427h2b3coord: 55..151
e-value: 4.8E-73
score: 258.7
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 10..152
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 120..142
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 27..152
e-value: 5.8E-59
score: 199.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 36..152
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 8..128
e-value: 6.9E-23
score: 81.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availablePANTHERPTHR23428:SF282HISTONE H2Bcoord: 10..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0016714.1Tan0016714.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity