Tan0016633 (gene) Snake gourd v1

Overview


Name	Tan0016633
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	F-box protein At2g35280-like
Location	LG04: 4057056 .. 4058555 (-)
RNA-Seq Expression	Tan0016633
Synteny	Tan0016633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAGATGAAAAGAAAATCAGACGTTTTGAGCTCTCAATTTTCAAGGTACGCTTAACTTTTAAAATGCATTTTTTTCTTCTTTTTACAATTTAATTAGAAAAAGAAAAAAGGCTTCAGTTTTTTTAGTTACATTACAAATTTAGCTTGACTCCAATTTACAAATTTCTTTTGTAAGCTAATAGAGGGTTCTTTCTTTTTCTGTCGAATAATTTTTTTATTTTTGTAAAAAGTTTAATACGTCATAAATTTATGAAGCATAAGGAAAAGCAATTCAATTATAGCTCATAAAGATTTAATACGTTAGAATTTTAAACACATATTAAACATAAGGTTTCAAAAAGGGTTAATACGTCGTAAAAAAATCTATTCTACTTCAGTCCCAATTAATTTGATAAACATCCAATCTTTTTTTTTTATAGTTTTTGAAAGTTTATTAATTTTTTCATTAATTCTCTTAAAAAAAACTTTAGATTCTTAGTCAAATTATAACAACAAAAATAAAATTTTAAAAACTACTTTTCAAGTAAAAAATAGATAACAAAATAAGTATATTCATGGATAGAAAGAATATTTATAGATTTAATTTTAAAAAATTAAAAATTAAAAACCAAATACAAAGGGGTCTTGTTTTATTTTTTTCAGCAGAAAGTTTACCACGGTGTAAGAATATTTTCCCCCTAAATATATAGAGCAAATTCAAGAGATCATAAAAAAGAAACCTGATAATTTATTTATTTTTTCCTTTTTGGTTTTTAATATTTTTGTCCCATTTATCTGCAGAAAAACAAAAAGGGTTCGTATCACCATTCCTCCACCGGCAATCAAATCACTCCCACAAGATTTATTGATCGAAGTTCTTACAAAAGTTGCAAAATCTTCATTCTCAGACTTAGTCAACGTCAAATTAGCCACCAAAGACTTTCTCGAAGCATCAAAAGACGGTTGGATATTTCGACACGTGTCACTTGGAAACTTCCCGAAAGTTCCATGGAAGAAGAACAACTCCAAATTTCGAGAGTTCATGGAAAATTGCTATAAAAATGGAAATCCAGAAGCCATTTACAGAAAGGGAATGTTGGAATTCTTCAACCATCGTGAAGAAGCTTCTGGATTAGCCAATTTAAAAGTTTCTGCCGAAAAAGGCCATACAGAAGCTTGTTATGTATATGGCATTATTTTGTACTCAACAAATTTGAAGGAGGAGGGAGTGGAGTTTTTGAAGAAATGTGAGATTAAATTAGGGTTTAAAATGGTCGAATGTCGCCAAAAAGTTAAGGAATTTTTTAGGGGGATTTGGATTATCAACCAGATTTCTTCGTTAGAAAAGGATTATGATTGTGTAATTAAAGATAATTGTAAGATTAACGAGAGAAGAAATGGATGGGATTGGAAAGATGAAAATGATTATTATGGAAAATACACGTGTGAAGGGTGTAAATGGAATGGTGAAGTTTCGAGATTTTGTAATATGTTAAGGACGGGGAGTTATAATTGA

mRNA sequence

ATGGGTCAGATGAAAAGAAAATCAGACGTTTTGAGCTCTCAATTTTCAAGAAAAACAAAAAGGGTTCGTATCACCATTCCTCCACCGGCAATCAAATCACTCCCACAAGATTTATTGATCGAAGTTCTTACAAAAGTTGCAAAATCTTCATTCTCAGACTTAGTCAACGTCAAATTAGCCACCAAAGACTTTCTCGAAGCATCAAAAGACGGTTGGATATTTCGACACGTGTCACTTGGAAACTTCCCGAAAGTTCCATGGAAGAAGAACAACTCCAAATTTCGAGAGTTCATGGAAAATTGCTATAAAAATGGAAATCCAGAAGCCATTTACAGAAAGGGAATGTTGGAATTCTTCAACCATCGTGAAGAAGCTTCTGGATTAGCCAATTTAAAAGTTTCTGCCGAAAAAGGCCATACAGAAGCTTGTTATGTATATGGCATTATTTTGTACTCAACAAATTTGAAGGAGGAGGGAGTGGAGTTTTTGAAGAAATGTGAGATTAAATTAGGGTTTAAAATGGTCGAATGTCGCCAAAAAGTTAAGGAATTTTTTAGGGGGATTTGGATTATCAACCAGATTTCTTCGTTAGAAAAGGATTATGATTGTGTAATTAAAGATAATTGTAAGATTAACGAGAGAAGAAATGGATGGGATTGGAAAGATGAAAATGATTATTATGGAAAATACACGTGTGAAGGGTGTAAATGGAATGGTGAAGTTTCGAGATTTTGTAATATGTTAAGGACGGGGAGTTATAATTGA

Coding sequence (CDS)

ATGGGTCAGATGAAAAGAAAATCAGACGTTTTGAGCTCTCAATTTTCAAGAAAAACAAAAAGGGTTCGTATCACCATTCCTCCACCGGCAATCAAATCACTCCCACAAGATTTATTGATCGAAGTTCTTACAAAAGTTGCAAAATCTTCATTCTCAGACTTAGTCAACGTCAAATTAGCCACCAAAGACTTTCTCGAAGCATCAAAAGACGGTTGGATATTTCGACACGTGTCACTTGGAAACTTCCCGAAAGTTCCATGGAAGAAGAACAACTCCAAATTTCGAGAGTTCATGGAAAATTGCTATAAAAATGGAAATCCAGAAGCCATTTACAGAAAGGGAATGTTGGAATTCTTCAACCATCGTGAAGAAGCTTCTGGATTAGCCAATTTAAAAGTTTCTGCCGAAAAAGGCCATACAGAAGCTTGTTATGTATATGGCATTATTTTGTACTCAACAAATTTGAAGGAGGAGGGAGTGGAGTTTTTGAAGAAATGTGAGATTAAATTAGGGTTTAAAATGGTCGAATGTCGCCAAAAAGTTAAGGAATTTTTTAGGGGGATTTGGATTATCAACCAGATTTCTTCGTTAGAAAAGGATTATGATTGTGTAATTAAAGATAATTGTAAGATTAACGAGAGAAGAAATGGATGGGATTGGAAAGATGAAAATGATTATTATGGAAAATACACGTGTGAAGGGTGTAAATGGAATGGTGAAGTTTCGAGATTTTGTAATATGTTAAGGACGGGGAGTTATAATTGA

Protein sequence

MGQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLATKDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNHREEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKVKEFFRGIWIINQISSLEKDYDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGCKWNGEVSRFCNMLRTGSYN

Homology

[Close]

BLAST of Tan0016633 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-20
Identity = 67/217 (30.88%), Postives = 112/217 (51.61%), Query Frame = 0


Query: 31  IKSLPQDLLIEVLTKVAKSSFSDLVNVKLATKDFLEASKDGWIFRHVSLGNFPKVPWKKN 90
           + SLP+DLL+E+ +    SS S + N++L +K F     + ++F  +SL     +PW +N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 91  NSKFREFMENCYKNGNPEAIYRKGMLEFFNHREEASGLANLKVSAEKGHTEACYVYGIIL 150
           ++K   F+E C ++ NPEA+++KG + +F  + +  GL  L  +AEKG  EA YVYG+IL
Sbjct: 84  SAK---FIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 143

Query: 151 --YSTNLKEEGVEFL----KKCEIKLGFKMVECRQKVKEFFRGIW-----IINQISS--L 210
                  K++G E L    K+       ++VE R K+++   G W     ++ Q+ +  +
Sbjct: 144 ICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAYV 203

Query: 211 EKDYDCVIKDNCKINERRNGWD-WKDENDYYGKYTCE 234
            +   C  K    +     GW  + DE D      CE
Sbjct: 204 SEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

[Close]

BLAST of Tan0016633 vs. ExPASy Swiss-Prot
Match: Q1PEW8 (F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-10
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 31  IKSLPQDLLIEVLTKVAKSSFSDLVNVKLATKDFLEASKDGWIFRHVSLGNFPKVPWKKN 90
           +++LPQDLL E++ K+   S  D  N  L+ K+   ++ D  + + ++L    K P   +
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKP--LS 70

Query: 91  NSKFREFMENCYKNGNPEAIYRKGMLEFFNHREEASGLANLKVSAEKGHTEACYVYGIIL 150
             K    M+ C  N NP+A Y KG++ +FN       L ++ ++A  G  EA Y+Y ++L
Sbjct: 71  CRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVDLHHIGIAANGGQKEAIYMYAMLL 130

Query: 151 YSTNLKEEGVEFLKKCE 168
                 EEG  ++ + E
Sbjct: 131 LCRGRTEEGKTYMSQLE 145

[Close]

BLAST of Tan0016633 vs. NCBI nr
Match: XP_023549492.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 2.0e-87
Identity = 164/259 (63.32%), Postives = 199/259 (76.83%), Query Frame = 0


Query: 2   GQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 61
           G +KRKS  L SQ SRKTK  R++  PP I+SLP DLLIEVL KVA SSF+DLV  KLAT
Sbjct: 3   GFVKRKSQALGSQISRKTKTARLSASPPTIESLPNDLLIEVLAKVAASSFTDLVQAKLAT 62

Query: 62  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 121
           K FLEAS   +IF+H SL NF K+ W  N+ +F  FME C  NGNPE +YRKGMLEFF H
Sbjct: 63  KKFLEASNHNYIFQHASLENFQKLLW-NNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTH 122

Query: 122 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 181
             EASG+  LK+SA+KG+ +ACYVYGIILY+T++++EGV+FLK CE KLGFK+VECR++V
Sbjct: 123 CREASGMTYLKLSAQKGYPDACYVYGIILYTTSMEDEGVKFLKICEAKLGFKLVECRRRV 182

Query: 182 KEFFRGIWIINQISSLEKD------YDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGC 241
           KEF R +W+ N+IS  +KD       + VIK+ CK N RR GWDW DE+DYYG++TCE C
Sbjct: 183 KEFVRYLWVKNKISVPKKDSSDRRGCESVIKNCCKKNVRRIGWDWNDEDDYYGEHTCEAC 242

Query: 242 KWNGEVSRFCNMLRTGSYN 255
           KWNGEV RFCNMLRTGSY+
Sbjct: 243 KWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Tan0016633 vs. NCBI nr
Match: XP_022990389.1 (putative F-box protein At1g67623 [Cucurbita maxima])

HSP 1 Score: 329.7 bits (844), Expect = 2.2e-86
Identity = 162/259 (62.55%), Postives = 199/259 (76.83%), Query Frame = 0


Query: 2   GQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 61
           G +KRKS  L SQ SRKTK  R++  PPAI+SLP DLLIE+L KVA SS++DLV  KLAT
Sbjct: 3   GSLKRKSQALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLAT 62

Query: 62  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 121
           K FLEAS   +IF+H SL NF K+ W  N+++F  FME C  NGNPE +YRKGMLEFF H
Sbjct: 63  KKFLEASSHNYIFQHASLENFHKLLW-NNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTH 122

Query: 122 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 181
             EASG+  LK+SA+KG++EACYVYGIILY+T++++EGV+FLK CE KLGFK+ ECR++V
Sbjct: 123 CREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRV 182

Query: 182 KEFFRGIWIINQISSLEK------DYDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGC 241
           KEF R +W+ N+IS  EK        + VIK+ CK N RR GWDW DE++YYG+ TCE C
Sbjct: 183 KEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEAC 242

Query: 242 KWNGEVSRFCNMLRTGSYN 255
           KWNGEV RFCNMLRTGSY+
Sbjct: 243 KWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Tan0016633 vs. NCBI nr
Match: XP_022990364.1 (putative F-box protein At1g67623 [Cucurbita maxima])

HSP 1 Score: 327.0 bits (837), Expect = 1.4e-85
Identity = 161/259 (62.16%), Postives = 198/259 (76.45%), Query Frame = 0


Query: 2   GQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 61
           G +KRKS  L S  SRKTK  R++  PPAI+SLP DLLIE+L KVA SS++DLV  KLAT
Sbjct: 3   GSLKRKSQSLGSHISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLAT 62

Query: 62  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 121
           K FLEAS   +IF+H SL NF K+ W  N+++F  FME C  NGNPE +YRKGMLEFF H
Sbjct: 63  KKFLEASSHNYIFQHASLENFHKLLW-NNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTH 122

Query: 122 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 181
             EASG+  LK+SA+KG++EACYVYGIILY+T++++EGV+FLK CE KLGFK+ ECR++V
Sbjct: 123 CREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRV 182

Query: 182 KEFFRGIWIINQISSLEK------DYDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGC 241
           KEF R +W+ N+IS  EK        + VIK+ CK N RR GWDW DE++YYG+ TCE C
Sbjct: 183 KEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEAC 242

Query: 242 KWNGEVSRFCNMLRTGSYN 255
           KWNGEV RFCNMLRTGSY+
Sbjct: 243 KWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Tan0016633 vs. NCBI nr
Match: KAG6601105.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.5 bits (833), Expect = 4.1e-85
Identity = 160/259 (61.78%), Postives = 194/259 (74.90%), Query Frame = 0


Query: 2   GQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 61
           G +KRKS  L SQ S   K  R +  PP I+SLP DLLIEVL KVA  SF+DLV+ KLAT
Sbjct: 3   GSLKRKSQALGSQISGTVKMARFSASPPPIESLPNDLLIEVLAKVAACSFTDLVHAKLAT 62

Query: 62  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 121
           K FLEAS   +IF+H SL NF K+ W  N+ +F  FME C  NGNPE +YRKGMLEFF H
Sbjct: 63  KKFLEASSHNYIFQHASLENFHKLLW-NNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTH 122

Query: 122 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 181
             EASG+A LK+SA+KG+ +ACYVYGIILY+T++++EGV+FLK CE KLGFK+ ECR++V
Sbjct: 123 CREASGMAYLKLSAQKGYPDACYVYGIILYATSMEDEGVKFLKICEAKLGFKLAECRRRV 182

Query: 182 KEFFRGIWIINQISSLEKD------YDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGC 241
           KEF   +W+ N+I  LE D       + VIK+ CK N RRNGWDW DE+DYYG++TCE C
Sbjct: 183 KEFVYYLWVKNKIYVLENDSSDRRGCESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEAC 242

Query: 242 KWNGEVSRFCNMLRTGSYN 255
           KWNGEV RFCNMLRTGSY+
Sbjct: 243 KWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Tan0016633 vs. NCBI nr
Match: KAG6601107.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.6 bits (828), Expect = 1.6e-84
Identity = 158/259 (61.00%), Postives = 195/259 (75.29%), Query Frame = 0


Query: 2   GQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 61
           G +KRKS  L SQ S   K  R +  PP I+SLP DLLIE+L KVA SSF+DLV+ KLAT
Sbjct: 3   GSLKRKSQALDSQTSETIKMARFSASPPPIESLPNDLLIEILAKVAASSFTDLVHAKLAT 62

Query: 62  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 121
           K FLEAS   +IF+H SL NF K+ W  N+ +F  F+E C  NGNPE +Y+KGMLEFF H
Sbjct: 63  KKFLEASSHNYIFQHASLENFHKLLW-NNSKEFWSFVEKCNNNGNPETLYQKGMLEFFTH 122

Query: 122 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 181
             EASG+A LK+SA+KG+ +ACYVYGIILY+T++++EGV+FLK CE KLGFK+ ECR++V
Sbjct: 123 CREASGMAYLKLSAQKGYPDACYVYGIILYATSMEDEGVKFLKICEAKLGFKLAECRRRV 182

Query: 182 KEFFRGIWIINQISSLEKD------YDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGC 241
           KEF   +W+ N+I  LE D       + VIK+ CK N RRNGWDW DE+DYYG++TCE C
Sbjct: 183 KEFVYYLWVKNKIYVLENDSSDRRGCESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEAC 242

Query: 242 KWNGEVSRFCNMLRTGSYN 255
           KWNGEV RFCNMLRTGSY+
Sbjct: 243 KWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Tan0016633 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.1e-86
Identity = 162/259 (62.55%), Postives = 199/259 (76.83%), Query Frame = 0


Query: 2   GQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 61
           G +KRKS  L SQ SRKTK  R++  PPAI+SLP DLLIE+L KVA SS++DLV  KLAT
Sbjct: 3   GSLKRKSQALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLAT 62

Query: 62  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 121
           K FLEAS   +IF+H SL NF K+ W  N+++F  FME C  NGNPE +YRKGMLEFF H
Sbjct: 63  KKFLEASSHNYIFQHASLENFHKLLW-NNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTH 122

Query: 122 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 181
             EASG+  LK+SA+KG++EACYVYGIILY+T++++EGV+FLK CE KLGFK+ ECR++V
Sbjct: 123 CREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRV 182

Query: 182 KEFFRGIWIINQISSLEK------DYDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGC 241
           KEF R +W+ N+IS  EK        + VIK+ CK N RR GWDW DE++YYG+ TCE C
Sbjct: 183 KEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEAC 242

Query: 242 KWNGEVSRFCNMLRTGSYN 255
           KWNGEV RFCNMLRTGSY+
Sbjct: 243 KWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Tan0016633 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 6.9e-86
Identity = 161/259 (62.16%), Postives = 198/259 (76.45%), Query Frame = 0


Query: 2   GQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 61
           G +KRKS  L S  SRKTK  R++  PPAI+SLP DLLIE+L KVA SS++DLV  KLAT
Sbjct: 3   GSLKRKSQSLGSHISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLAT 62

Query: 62  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 121
           K FLEAS   +IF+H SL NF K+ W  N+++F  FME C  NGNPE +YRKGMLEFF H
Sbjct: 63  KKFLEASSHNYIFQHASLENFHKLLW-NNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTH 122

Query: 122 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 181
             EASG+  LK+SA+KG++EACYVYGIILY+T++++EGV+FLK CE KLGFK+ ECR++V
Sbjct: 123 CREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRV 182

Query: 182 KEFFRGIWIINQISSLEK------DYDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGC 241
           KEF R +W+ N+IS  EK        + VIK+ CK N RR GWDW DE++YYG+ TCE C
Sbjct: 183 KEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEAC 242

Query: 242 KWNGEVSRFCNMLRTGSYN 255
           KWNGEV RFCNMLRTGSY+
Sbjct: 243 KWNGEVLRFCNMLRTGSYD 260

[Close]

BLAST of Tan0016633 vs. ExPASy TrEMBL
Match: A0A6J1GZQ6 (F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 9.3e-83
Identity = 158/259 (61.00%), Postives = 192/259 (74.13%), Query Frame = 0


Query: 2   GQMKRKSDVLSSQFSRKTKRVRITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 61
           G +KRKS  L SQ S   K  R +  PP I+SLP DLLIEVL KVA SSF+DLV+ KLAT
Sbjct: 3   GSLKRKSQALRSQISGTIKMARFSASPPPIESLPNDLLIEVLAKVAASSFTDLVHAKLAT 62

Query: 62  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 121
           K FLEAS   +IF+H SL NF K+ W  N+ +F  FME C  NGNPE +YRKGMLEFF H
Sbjct: 63  KKFLEASSHNYIFQHASLENFHKLLW-NNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTH 122

Query: 122 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 181
             EASG+A LK+SA+KG+ +ACYVYGIILY+T++++EGV+FLK CE KLGFK+ +CR +V
Sbjct: 123 CREASGMAYLKLSAQKGYPDACYVYGIILYATSMEDEGVKFLKICEAKLGFKLAKCRGRV 182

Query: 182 KEFFRGIWIINQISSLEKD------YDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGC 241
           KEF   +W+ N+I  LE D       + VIK+ C+ N RR G DW DE+DYYG++TCE C
Sbjct: 183 KEFIYYLWVKNKIYVLENDSSNRRGCESVIKNCCRKNVRRIGCDWNDEDDYYGEHTCEAC 242

Query: 242 KWNGEVSRFCNMLRTGSYN 255
           KWNGEV RFCNMLRTGSYN
Sbjct: 243 KWNGEVLRFCNMLRTGSYN 260

[Close]

BLAST of Tan0016633 vs. ExPASy TrEMBL
Match: A0A6J1GYN4 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.3e-79
Identity = 147/238 (61.76%), Postives = 181/238 (76.05%), Query Frame = 0


Query: 23  RITIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLATKDFLEASKDGWIFRHVSLGNF 82
           R +  PP I+SLP DLLIEVL KVA  S++DLV+ KLATK FLEAS   +IF+H SL NF
Sbjct: 3   RFSASPPPIESLPNDLLIEVLAKVAACSYTDLVHAKLATKKFLEASSHNYIFQHASLENF 62

Query: 83  PKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNHREEASGLANLKVSAEKGHTEA 142
            K+ W  N+ +F  FME C  NGNPE +YRKGMLEFF H  EASG+A LK+SA+KG+ +A
Sbjct: 63  HKLLW-NNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDA 122

Query: 143 CYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKVKEFFRGIWIINQISSLEKD-- 202
           CYVYGIILY+ ++++EGV+FLK CE KLGFK+ +CR +VKEF   +W+ N+I  LE D  
Sbjct: 123 CYVYGIILYAMSMEDEGVKFLKICEAKLGFKLAKCRGRVKEFIYCLWVKNKIYVLENDSS 182

Query: 203 ----YDCVIKDNCKINERRNGWDWKDENDYYGKYTCEGCKWNGEVSRFCNMLRTGSYN 255
                + VIK+ CK N RRNGWDW DE+DYYG++TCE CKWNGEV RFCNMLRTGSY+
Sbjct: 183 DRRGCESVIKNCCKKNVRRNGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSYD 239

[Close]

BLAST of Tan0016633 vs. ExPASy TrEMBL
Match: A0A0A0LS96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.5e-77
Identity = 154/257 (59.92%), Postives = 189/257 (73.54%), Query Frame = 0


Query: 3   QMKRKSDVLSSQFSRKTKRVRI-TIPPPAIKSLPQDLLIEVLTKVAKSSFSDLVNVKLAT 62
           Q KR S  L +Q SR T++ +I  + P  IKSLP DLL EVL KVA SS+ DL+  KLAT
Sbjct: 5   QPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLAT 64

Query: 63  KDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFMENCYKNGNPEAIYRKGMLEFFNH 122
           K FLEAS D +IF+HVSLGNF  + W  N+ KF  FME C  + NPE++YRKGMLEFF H
Sbjct: 65  KHFLEASNDRYIFQHVSLGNFRNLLW-NNSPKFWSFMETCNNSENPESLYRKGMLEFFTH 124

Query: 123 REEASGLANLKVSAEKGHTEACYVYGIILYSTNLKEEGVEFLKKCEIKLGFKMVECRQKV 182
            +EASG+A LK SA+KG+ +ACYV+G+ILY++NLK+EG+EFLK  E+KLG KM+ECRQ+V
Sbjct: 125 CKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRV 184

Query: 183 KEFFRGIWIINQISSLEKDYD----CVIKDNCKINERRNGWDWKDENDYYGKYTCEGCKW 242
           KEF   IWI N+IS  E D      C    NC++NE+ N WD KDE+DYYGKYTCE CKW
Sbjct: 185 KEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEECKW 244

Query: 243 NGEVSRFCNMLRTGSYN 255
           N EV RFC MLRTG ++
Sbjct: 245 NNEVLRFCKMLRTGRFS 260

[Close]

BLAST of Tan0016633 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-21
Identity = 67/217 (30.88%), Postives = 112/217 (51.61%), Query Frame = 0


Query: 31  IKSLPQDLLIEVLTKVAKSSFSDLVNVKLATKDFLEASKDGWIFRHVSLGNFPKVPWKKN 90
           + SLP+DLL+E+ +    SS S + N++L +K F     + ++F  +SL     +PW +N
Sbjct: 24  LDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLPWHEN 83

Query: 91  NSKFREFMENCYKNGNPEAIYRKGMLEFFNHREEASGLANLKVSAEKGHTEACYVYGIIL 150
           ++K   F+E C ++ NPEA+++KG + +F  + +  GL  L  +AEKG  EA YVYG+IL
Sbjct: 84  SAK---FIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVIL 143

Query: 151 --YSTNLKEEGVEFL----KKCEIKLGFKMVECRQKVKEFFRGIW-----IINQISS--L 210
                  K++G E L    K+       ++VE R K+++   G W     ++ Q+ +  +
Sbjct: 144 ICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTVVEQLKTAYV 203

Query: 211 EKDYDCVIKDNCKINERRNGWD-WKDENDYYGKYTCE 234
            +   C  K    +     GW  + DE D      CE
Sbjct: 204 SEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

[Close]

BLAST of Tan0016633 vs. TAIR 10
Match: AT1G74875.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-20
Identity = 66/221 (29.86%), Postives = 110/221 (49.77%), Query Frame = 0


Query: 40  IEVLTKVAKSSFSDLVNVKLATKDFLEASKDGWIFRHVSLGNFPKVPWKKNNSKFREFME 99
           I ++  V  SS S+  N++L +K F   S D +I + +SL   P +PW +N  KF  F +
Sbjct: 21  IHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPW-RNRKKFHNFFK 80

Query: 100 NCYKNGNPEAIYRKGMLEFF----NHREEASGLANLKVSAEKGHTEACYVYGIIL--YST 159
            C K+GN EAIYRKG++++F    + R+   GL ++  +A  G+ EA YVYG+IL     
Sbjct: 81  RCRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILICLGG 140

Query: 160 NLKEEGVEFLKKCEIKLGF-KMVECRQKVKEFFRGIWIINQ--ISSLEKDYDCVIKDNCK 219
             K+ G + L      L     ++  +K +   R +W   +  +  L+K Y   +++NC 
Sbjct: 141 KTKQNGFKILSSLRKPLMLSNTIKEMEKHRTHIRNMWWWGEPMMRHLQKSY---VRENCN 200

Query: 220 INERRNGWD-------WKDENDYYGKYTCEGCKWNGEVSRF 245
            + R   +        + +++D      CE C  + EV  F
Sbjct: 201 CDGRTEIFPNYCFRHRFGEDDDMLTSSACEICLCHHEVKLF 237

[Close]

BLAST of Tan0016633 vs. TAIR 10
Match: AT2G35280.1 (F-box family protein )

HSP 1 Score: 68.6 bits (166), Expect = 8.5e-12
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 31  IKSLPQDLLIEVLTKVAKSSFSDLVNVKLATKDFLEASKDGWIFRHVSLGNFPKVPWKKN 90
           +++LPQDLL E++ K+   S  D  N  L+ K+   ++ D  + + ++L    K P   +
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKP--LS 70

Query: 91  NSKFREFMENCYKNGNPEAIYRKGMLEFFNHREEASGLANLKVSAEKGHTEACYVYGIIL 150
             K    M+ C  N NP+A Y KG++ +FN       L ++ ++A  G  EA Y+Y ++L
Sbjct: 71  CRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVDLHHIGIAANGGQKEAIYMYAMLL 130

Query: 151 YSTNLKEEGVEFLKKCE 168
                 EEG  ++ + E
Sbjct: 131 LCRGRTEEGKTYMSQLE 145

[Close]

BLAST of Tan0016633 vs. TAIR 10
Match: AT3G30430.1 (F-box family protein )

HSP 1 Score: 48.9 bits (115), Expect = 7.0e-06
Identity = 31/105 (29.52%), Postives = 54/105 (51.43%), Query Frame = 0


Query: 31  IKSLPQDLLIEVLTKVAKSSFSDLVNVKLATKDFLEASKDGWIFRHVSLGNFPKVPWKKN 90
           ++ LPQDLL E++ K+      D  N  L+ K+   ++ D  + + ++L    K P   +
Sbjct: 11  LEVLPQDLLGEIVAKIGAKYAEDYHNCILSCKELGASANDERVLKTLNLAPLVKKP--LS 70

Query: 91  NSKFREFMENCYKNGNPEAIYRKGMLEFFNHREEASGLANLKVSA 136
             K    M+ C  N NP+A Y KG++ +FN      GL ++ ++A
Sbjct: 71  CRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVGLHHIGIAA 113

The following BLAST results are available for this feature:

BLAST of Tan0016633 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXC7	2.2e-20	30.88	Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE...	[more]
Q1PEW8	1.2e-10	29.93	F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1	[more]

BLAST of Tan0016633 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549492.1	2.0e-87	63.32	putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]	[more]
XP_022990389.1	2.2e-86	62.55	putative F-box protein At1g67623 [Cucurbita maxima]	[more]
XP_022990364.1	1.4e-85	62.16	putative F-box protein At1g67623 [Cucurbita maxima]	[more]
KAG6601105.1	4.1e-85	61.78	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6601107.1	1.6e-84	61.00	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Tan0016633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JRX4	1.1e-86	62.55	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=...	[more]
A0A6J1JRV1	6.9e-86	62.16	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=...	[more]
A0A6J1GZQ6	9.3e-83	61.00	F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 ...	[more]
A0A6J1GYN4	6.3e-79	61.76	putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 P...	[more]
A0A0A0LS96	1.5e-77	59.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1	[more]

BLAST of Tan0016633 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67623.1	1.5e-21	30.88	F-box family protein	[more]
AT1G74875.1	1.3e-20	29.86	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G35280.1	8.5e-12	29.93	F-box family protein	[more]
AT3G30430.1	7.0e-06	29.52	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 48..177 e-value: 1.3E-5 score: 25.9
IPR040338	Putative F-box protein At1g67623-like	PANTHER	PTHR33784	OS05G0482100 PROTEIN	coord: 30..249
None	No IPR available	PANTHER	PTHR33784:SF31	F-BOX PROTEIN	coord: 30..249
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 56..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016633.1	Tan0016633.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding