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Tan0016616 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCACGAGACCGATTCCAATGAGGAGATAATAGGAGATTCACTCCAGGAGTTTCAGGAAAAGGGAGCTTTAAACCCCATCGTGGTGGGCAGTCTACTCCAAAGGACTGGTACAGGTGGGCGTGGGGAAAGACAGAGGCAGTAGGGATCAAGTTTCCTTATGGGATCAGCGAGGGACTCCCGTACAAGGCAACCCAGTGAGTCAGTAGCAAGTTCAGCAAGGAAACCTTTGTGCAGCACTTGTGGAAAGTATCATTGGGGTCGATGTTTGAGTGGCGAAAATGTATGTTTCAACTGTGGGCAAGGTGGTCACTTCAAAAGGGAATGCCCCCAATTAATGCAAGAAGGCATGGTGGGACAGAGAACTACATCGCATACTGTGAACCAGCAGCAAAATATTGGGGCAGCTGGAGGAGAAGGCACTAGTAGTGTTAAGCAAAAAGGCGAGTAG CCACGAGACCGATTCCAATGAGGAGATAATAGGAGATTCACTCCAGGAGTTTCAGGAAAAGGGAGCTTTAAACCCCATCGTGGTGGGCAGTCTACTCCAAAGGACTGGTACAGGTGGGCGTGGGGAAAGACAGAGGCAGTAGGGATCAAGTTTCCTTATGGGATCAGCGAGGGACTCCCGTACAAGGCAACCCAGTGAGTCAGTAGCAAGTTCAGCAAGGAAACCTTTGTGCAGCACTTGTGGAAAGTATCATTGGGGTCGATGTTTGAGTGGCGAAAATGTATGTTTCAACTGTGGGCAAGGTGGTCACTTCAAAAGGGAATGCCCCCAATTAATGCAAGAAGGCATGGTGGGACAGAGAACTACATCGCATACTGTGAACCAGCAGCAAAATATTGGGGCAGCTGGAGGAGAAGGCACTAGTAGTGTTAAGCAAAAAGGCGAGTAG ATGGGATCAGCGAGGGACTCCCGTACAAGGCAACCCAGTGAGTCAGTAGCAAGTTCAGCAAGGAAACCTTTGTGCAGCACTTGTGGAAAGTATCATTGGGGTCGATGTTTGAGTGGCGAAAATGTATGTTTCAACTGTGGGCAAGGTGGTCACTTCAAAAGGGAATGCCCCCAATTAATGCAAGAAGGCATGGTGGGACAGAGAACTACATCGCATACTGTGAACCAGCAGCAAAATATTGGGGCAGCTGGAGGAGAAGGCACTAGTAGTGTTAAGCAAAAAGGCGAGTAG MGSARDSRTRQPSESVASSARKPLCSTCGKYHWGRCLSGENVCFNCGQGGHFKRECPQLMQEGMVGQRTTSHTVNQQQNIGAAGGEGTSSVKQKGE Homology
BLAST of Tan0016616 vs. NCBI nr
Match: WP_217833293.1 (CCHC-type zinc finger protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 104.0 bits (258), Expect = 7.4e-19 Identity = 52/89 (58.43%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Tan0016616 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 84.0 bits (206), Expect = 7.9e-13 Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Tan0016616 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 84.0 bits (206), Expect = 7.9e-13 Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Tan0016616 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa]) HSP 1 Score: 81.6 bits (200), Expect = 3.9e-12 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Tan0016616 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 5.1e-12 Identity = 45/88 (51.14%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Tan0016616 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.8e-13 Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Tan0016616 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.8e-13 Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Tan0016616 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Tan0016616 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12 Identity = 45/88 (51.14%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Tan0016616 vs. ExPASy TrEMBL
Match: A0A5A7UKD3 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00860 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11 Identity = 43/89 (48.31%), Postives = 54/89 (60.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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