Tan0016540 (gene) Snake gourd v1

Overview


Name	Tan0016540
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	stress-induced protein KIN2-like
Location	LG07: 7094898 .. 7095289 (-)
RNA-Seq Expression	Tan0016540
Synteny	Tan0016540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAATTCTCAAAATCTGAGCTACCAAATTGGAGAAGCCAAAGGCCAAGCACAGGTTCACTCTTCCATTTTGCTATTTACATTTAGTCATGTCATGGTTTTATTTAATGATTCATGCTTTAATGTAGTTTGTGATATAAACCGTATCATCCTAACATTATTTTTAATGGCTTAGTGATATGACTAGATATAAGATTAAAGAAGTGATCGATATATAACATATTGATGTATGTGATTATGTAGGAGAAGGCAAGCAATATGATGGATAAGGCAAGTGATGCAGCTCAATCAGCCAAAGAGTCGATACAAGAGGCAGGACAACAGATAAAGGCCAAGGCACAGGGTGCAGCTGATGCTGTGAAGGATGCCACGGGCATGAAAAAATGA

mRNA sequence

ATGGCAGACAATTCTCAAAATCTGAGCTACCAAATTGGAGAAGCCAAAGGCCAAGCACAGGAGAAGGCAAGCAATATGATGGATAAGGCAAGTGATGCAGCTCAATCAGCCAAAGAGTCGATACAAGAGGCAGGACAACAGATAAAGGCCAAGGCACAGGGTGCAGCTGATGCTGTGAAGGATGCCACGGGCATGAAAAAATGA

Coding sequence (CDS)

ATGGCAGACAATTCTCAAAATCTGAGCTACCAAATTGGAGAAGCCAAAGGCCAAGCACAGGAGAAGGCAAGCAATATGATGGATAAGGCAAGTGATGCAGCTCAATCAGCCAAAGAGTCGATACAAGAGGCAGGACAACAGATAAAGGCCAAGGCACAGGGTGCAGCTGATGCTGTGAAGGATGCCACGGGCATGAAAAAATGA

Protein sequence

MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVKDATGMKK

Homology

[Close]

BLAST of Tan0016540 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-04
Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          M++ ++N ++Q G+A G+A+EK++ ++DKA DAA +A  S Q+AG+ I   A G  + VK
Sbjct: 1  MSETNKN-AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVK 60

Query: 61 DATGMKK 68
          D TG+ K
Sbjct: 61 DKTGLNK 66

[Close]

BLAST of Tan0016540 vs. NCBI nr
Match: XP_004152386.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein Csa_000676 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 4.2e-21
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQN+SYQIGEAKGQAQEKASNMM+KASDAAQSAKESIQE GQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 108.2 bits (269), Expect = 2.7e-20
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQ +SY  GEAKGQAQEKASNMMDKASDAAQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 8.0e-20
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQ +SY +GEAKGQAQEKASNMMDKASD AQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQ +SY  GEAKGQAQEKASNMMDKASDAAQSAKES+QEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. NCBI nr
Match: TXG47405.1 (hypothetical protein EZV62_026699 [Acer yangbiense])

HSP 1 Score: 104.8 bits (260), Expect = 3.0e-19
Identity = 58/66 (87.88%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQ +SYQ GEAKGQAQEKASNMMDKASDAAQSAKES+Q+ GQQ+K KAQGAADAVK
Sbjct: 1  MADNSQKMSYQAGEAKGQAQEKASNMMDKASDAAQSAKESMQQTGQQVKEKAQGAADAVK 60

Query: 61 DATGMK 67
          DATGMK
Sbjct: 61 DATGMK 66

[Close]

BLAST of Tan0016540 vs. ExPASy TrEMBL
Match: A0A0A0KPD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQN+SYQIGEAKGQAQEKASNMM+KASDAAQSAKESIQE GQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-20
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQ +SY  GEAKGQAQEKASNMMDKASDAAQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-20
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQ +SY +GEAKGQAQEKASNMMDKASD AQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-20
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQ +SY +GEAKGQAQEKASNMMDKASD AQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.6e-20
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          MADNSQ +SY  GEAKGQAQEKASNMMDKASDAAQSAKES+QEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMKK 68
          DATGM K
Sbjct: 61 DATGMNK 67

[Close]

BLAST of Tan0016540 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-18
Identity = 49/67 (73.13%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          M+ NSQN+S+Q G+AKGQ QEKAS MMDKAS+AAQSAKES++E GQQIK KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMKK 68
          +ATGM K
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Tan0016540 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 83.6 bits (205), Expect = 6.7e-17
Identity = 44/67 (65.67%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          M++NSQ++S+  G+AKGQ QEKASN++DKAS+AAQSAKESIQE GQQ+K KAQGA++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMKK 68
          + TG+ K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of Tan0016540 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-16
Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 0


Query: 3  DNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVKDA 62
          DN QN SYQ G+A GQ +EKA  MMDKA DAA SA++S+Q+ GQQ+K KAQGAAD VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMKK 68
          TGM K
Sbjct: 62 TGMNK 66

[Close]

BLAST of Tan0016540 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 46.6 bits (109), Expect = 9.1e-06
Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          M++ ++N ++Q G+A G+A+EK++ ++DKA DAA +A  S Q+AG+ I   A G  + VK
Sbjct: 1  MSETNKN-AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVK 60

Query: 61 DATGMKK 68
          D TG+ K
Sbjct: 61 DKTGLNK 66

[Close]

BLAST of Tan0016540 vs. TAIR 10
Match: AT5G15960.1 (stress-responsive protein (KIN1) / stress-induced protein (KIN1) )

HSP 1 Score: 43.1 bits (100), Expect = 1.0e-04
Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 1  MADNSQNLSYQIGEAKGQAQEKASNMMDKASDAAQSAKESIQEAGQQIKAKAQGAADAVK 60
          M++ ++N ++Q G+  G+A+EK++ ++DKA DAA  A    Q+AG+ +   A G  + VK
Sbjct: 1  MSETNKN-AFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVK 60

Query: 61 DATGMKK 68
          D TG+ K
Sbjct: 61 DKTGLNK 66

The following BLAST results are available for this feature:

BLAST of Tan0016540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31169	1.3e-04	43.28	Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1	[more]

BLAST of Tan0016540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152386.1	4.2e-21	92.54	stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein C...	[more]
XP_022159706.1	2.7e-20	89.55	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_008437025.1	8.0e-20	88.06	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]
XP_022159716.1	1.4e-19	88.06	stress-induced protein KIN2-like [Momordica charantia]	[more]
TXG47405.1	3.0e-19	87.88	hypothetical protein EZV62_026699 [Acer yangbiense]	[more]

BLAST of Tan0016540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPD4	2.0e-21	92.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1	[more]
A0A6J1E4Q8	1.3e-20	89.55	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A5A7TJP0	3.9e-20	88.06	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ASP1	3.9e-20	88.06	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV...	[more]
A0A6J1E4S0	6.6e-20	88.06	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 ...	[more]

BLAST of Tan0016540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	1.2e-18	73.13	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	6.7e-17	65.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	9.7e-16	67.69	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	9.1e-06	43.28	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]
AT5G15960.1	1.0e-04	38.81	stress-responsive protein (KIN1) / stress-induced protein (KIN1)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 1..65 e-value: 1.7E-6 score: 30.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016540.1	Tan0016540.1	mRNA