Tan0016453 (gene) Snake gourd v1

Overview
NameTan0016453
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
LocationLG06: 51055391 .. 51065669 (-)
RNA-Seq ExpressionTan0016453
SyntenyTan0016453
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCTCTATTATGTAATTTTCAGTTTTTAAGCATATTTCATAAGTTTTAGGTTACATTTGAGTAGTGGATAGTTATGGCATTAAAGTTGTGGAAGTTTCAATATTAAACATGCCATTTTAGCTTATTTTAGGTTACAATTTAAAGGCTATATAAAGCCATCAAAGATGTATTGTAAAAAGAGACTTGGAATCATGTTTTGGATGAAAAGTTGCATATTTTGCTACTTAAGCCATGAGCTTGTTTCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCGTTGATCAAACTACTTGTGGAGTGATTCGAATCTTGAGTTTAGAAACAAGTTTTCTCTACTCTTGATCTTGATCATCAAGGTAAATTCCGTTTCTATCTTCTTCCTTGGGATGAAATCATCTAGGTTTGGGGTTTTTGAGTTTTAGATCTATTTTGCTACTTAAGCCATGAGCTTGTTTCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCGTTGATCAAACTACTTGTGGAGTGATTCGAATCTTGAGTTTAGAAACAAGTTTTCTCTACTCTTGATCTTGATCATCAAGGTAAATTCCGTTTCTATCTTCTTCCTTGGGATGAAATCATCTAGGTTTGGGGTTTTTGAGTTTTAGATCTAAAGGTCTTGTTCTTCAACAAGGTTGTTAGATTTTAAATCATCAAGAGTTACTTATCGTAAGTTGATCCCCTAGTCCGAATTTCCTAAACAAAACATAGTATAATAACCATTCCTTTCATTTTCTTTTCTTCATTATTCTTAAAGCAATCCAAACCAAAATGGTTTAAGTTTTTCCTTCCTTGTTTTCCTTTTATCTTTCACTTCATTTCTTTTCTTTTTAAAACAAGGAAAACCAAGTTTTAAGGATTCATTTCTTCTTTTCTTTTGTTTTCTTTCTTTAAAAGAAAATTCCAAAGAATGATTCTCGGGTTTACAACTTTGGTCCATCTTGGTCAAAAAAAGACGAACTTCGCTCTAGGGGACGAACTTATGGTTTCAGAATCGATAAGCTTCGAATGGAGACAACTTTGGTCAATCTTGTTCCAAGCAGGACGAACTTCACTCTAGAGGACGAACTTATGGTTTGAAACTCGACAAACTTCGAAAGGAGACAACTTTGGTTCATCTTGGTCTGAACAGGACGAACTTCCATCTAGGGGATGAACTTATGGTTTCAGACTCGACAAACATCGAATGGAGACAACTTATGTTCTTCTTGCTCCAAACTGCGCACTAGGGGATGAACTTATGATTTCAGACTCGACATCTTCGAATGGTGACAACTTTGGTCCATCTTGGTCCAAACAGGACAACTTCTCTCTAGGAAACGAACTTATGGTCTTAGACTCGACAAACTTCGAATGGAGACAACTTTGCTTCATCTTGGTCCAAATAGGACGAACTTCGCACTAGGGGACAAACTTATGGTTTAGAGTCGAGAAAGTTCGAATGGAGAACACTTTGGTCCATCTTGGTTCGAGCAGGACGAAATTCGGACTAGGGGATCAACTTACGATTTCAGACTCGACAAATTTCGAATGGAGACAACTTTGGCCCTTCTTGGTCCAAACAAGACAAACTTCCCTCTTGGGGACGAACTTATGGTTTCAAACTCGACAAACTTCGAAAGGAGACAACTTTGGTGCATCTTGGTCCAAACAGGATGAACTTCCCTCTAGGGGGACGAACTTCTGGTTTTAGAATCGACAAACTTCGAATGGAGACAACTTTGGTCCATCTTTGTCCATACAGGACGAACTTCAGACTAGGGGATGTACTTATGATTTCAGACTCGACAAACTTCGAATGGTGACAGCATTTGTCCATCTTGGACCAAATAGGACAAACTTCCCTCTATGGGACAAACTTATGGTTTCAGACTCGACAATCTTCGAATGGAGACAACTTTGGGTCATTTTAGCCAAAATGGGATGAACTTCACAGTAGGGGATGAACTTATGGTTTCAGGCTCAACAAACTTCGAATGGAGACAATTTTGGTCCATCTTGGTCCGAACAGGACGAACTTCCCTCTAGGGGACGAACTTATTGTTTCAGACTCGACAAACTTCGAATGGCGACAACTTTGGTTCATCTTGGTCAAAACATGACGAACTTTGCTCTAAGGGACGAACATATGGTTTCAAAATTGACAAAAATCGAATGGAGACATTTTTTGTCCATCTTGTTCCAAGCAGGACGAACTTATGGTTTCAGACTCGACAAACTTCGAATGCAGAGAACTTTGGTCCATCTTAGTCCAAACAGGAAGAACTTTCCTCTAGGGGACGAACTTATGGTTTCAGACTGGACAAACATCAAATGGAGACAACTTTGGTCCAACTTGATCCAAACAGGACGAACTTCGCACGAGGGTACGTACTTATGCTTTCAGACTCGACAAACTTCGAATAGAGAAAACATTGATCCATCTTGGTCCAAACAGGACGAACTTCGCACTAAGGGGATGAAAGTATGATTCCATACTAGACAAAATTCGAATGGAGACAACTTTGGTCTATCTTGGTCTAAAAAGGACGAACTTCCATCTAGGGGGTGAACTTATGGTTTCAGACTCGACAAACTTCGAATGGAGACAACTTTGGTCCATCTTGGTTAAAAAAGGACGAACTTCGAACTAGGGGAGGAACTTATGATTGAACTCAACAAACATCGAATGGTGACAACTTTGGTCCATCATGGTCCAAACAGGACGAAATTCCCTCTAGGGGACAACTTATGGTTTTAGACTCGACAAACTTCGAATGGAGACAACTTTGGTCCATCTTAGTCCATAAAGGATGAACTTCGCACTATGGGACGAACTTATTGTTTCAGACTTGACAAACTTCGAATGGAGAGAACTTTGGTCCATCTTTGTTCGAACAGGGCGAACTTCCCTCTAGGGGACGAACTTATGGTTTCAGACTTGACAAACTTTGAATAGAGACAATTTTGGTCCATCTTGGTCCAAATAGGACGAACTTCGCACTAGGTGAGGAATTTATGTTTTAAGACTCGACAAACTTCGAATGGGACAACTTTGGTCCATATTGGTCCGAACAGGATGAACTTCCCTCTAGGGGCGAACTTATGGTATCAGACTCGACAAACTTTGAATGGAGACAACTTTGGTCCGTCTTGGACAAAACAGGCGAACTTCACTCTTAGGGACGGGGACGAACTTATGGTTTCAGACTCGACAAACTTCGACTGGAGACAACTTTGGTCCATCTTGGTCTAATCAGGAAAAACTTCCCTCTAGGGGACGAACTTATGGTTTCAGACTCAACAAACTTCGAATGGAGACAACTTTGGTCCATTTTGGTCCAAACAGGGCGAACATCGCTGATATGAATCTTACCATTCTAGAGAAAAGCTTCAAAATGGAGTTGAATTAAATGTTGTTCAACTTCATCTATGGCAAACAAAAGATGCATTTAATGAATTCAAGTGCAATAAATGCTTCATTAAAGACAAGTCAAGCTACATTTATGCAACAAGAGCTTCAAGTTACTTCAAGTGTGGCTTCATTTATTCATGGATGGTTACAAAGTATTGATAAGATTAATAGAAGTTTAATTCTCGGATTTATGGTAATTTTTATGTAATTTTCAGTTTTAAAGTTATCTTTTCAATGTTTTAAGTTACAATTTTGTTAGTGGAGATCATGGTATTAATGGAGATGTAAGTTACAACCTGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAACTTGCACTTAATGAACTCATAGCTAAATTTATGGAACTTAAGTTTAACTTGGGTTTTACCTAAAAGAACTAAGTTGAACTAAAGTAACATTTAATATGGTGATGTTTGAACTGAAGTTGCATTCAATGAGGTGGAGATGGATTCAATGAAGTCAAGTATCATTACAAGCTTCATTCAAGACAAGCTAAGCTTCAATTATGGAACACAAGTTCAAACCATTTAAAGCTATGGATTAGTATTAAAATAATGGTTACAAGACAACACCTTTATTAGTTTAAATGTAATTTCAGTTTTGTTTATCATTTAAGTTTGTTTTCAATATGGGAGTTGTGGTTAAATTGTAACTCATATAGGTTACTCTTTTCCCCACTAACTAGCCCATAAAGTTAGTGTCTATTTGTCAATTAGGTTAAGGGTCTCAAAGGCTATATAAAGCCCTCTCTTCTTCCATTGTAGACAGAATTTTAAAGTGAATGAATTGAGTTTTCTTTTAGCTTTGTTGAGAGCTAAGTTTTCCTTATTGCAATTTCTTGTGTTTAGAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGTGATTCGAATCACGAGTTTAGAAACGAGTTTTCTTTACTCTTGATCTTGATCATCAAGGTAATCCGTTCCAAACTTTTCCTTGGGTTGATTCCATGTCGCTTTTGGGGTTTTTAAGTTTTAGATCTAAAGGTCTTGTTTTCTCAACAAGGTTGTTAGGTCTAATTCTTGGGAGTTACTTAACATTTGGTATCAGAGCATTAGGCTCTTTGATCGGACATATGTTTCCTTGCATTTATCTCTTTGAGTTCTTTTCTCTTTAGCTTCAGTTTTTGCAGATCCGAGCATGTTCTTATTCTGAATAAAAATACAAAAAGTATTCTTTCCGTTCCGTATTTCATTATATCGTCTTCTACAAGATTTGAGATCTAGATCTGATCTACAATTTGTTATTCTTTGATATCTTCAAAATCGGATTTCTTCAGAGTGAAATATTCATATTTTGCAAATCTGTCAAAAGAAGACAGCATATCCGAGAGCAAATTTTCTGTTTTAATTTTTTTGTTCATTGTTTCAAGGTAACTTGAATTCAATTATTCCTTTGATAGTACTCTCTTGATGAATTGATATTTGATCATTTGTTCTAGGTCTATTTTTGTTTTCCCTCTTGAATTCCTTTCATTTTGTCATTTTTTTCTTAAACTTGTTTCTTTTTGTTATTCGGATTGCTCCTTCAATACACTTGTTTGTATTCTTAGTGTGTTGTCTAATCACTTTGAATTGCACTTAGCTCTTTGACTTTGCTATACTCATACACCAATCTGTTTCTGAGTGCTTTGTGAGGTTGTGAGGTAAGGGAGTGATACATTAATTAGAGTGTTGAGTGTTAAACACGAGTGAACTTCATTAACGAGTGAAATACGTGAGGGAGTGCTTATGAGGTCCTTTTTTTTTTTTTTTTTGTTACTTTACCGTATTTTGCAGCATGGCACAAGAAGGTGATCTTAACATTAACGAAGCCCGAATGAGGGAGGCACAACAAGAAACCATGGAGAGAATGATTCGTGGAATAGAAGAGTTATCGGAGCGTATACGGAGGTTGGAGGTTCAAAACCACGCTAGGAGGAGAATTCCACCCCCTCCACAACAACGTGAGGATGACCATGACAACAAATATGAGGGAGGAAGTTCTGATCAACTAGAAGATGACCAAGTTACATTAATAGCAGCACCACGAAGGGGAGAAGGACGTGTTGGTCGTGGCTTGAATAGGGGAAGAGGTCAGGGACGAAGACATCAACATTTACAAAGGCGAGTTCCTTATGAAGAAGGAATTGACCGAAACGTGGGAAGCATCAAATTGAAACTTCCGAAGTTCTATGGCAAAATTGATCCGGAGGAGTACCTTCAATGGGAGAAAACAGTGGAGTCGGTGTTCAATTGCCATAATTTCAGTGAAGAAAAGAAGGTAATGCTTTGTGTTGCTCAATTTAAACAATATGCTCAAACGTGGTGGGATAAATTGATGTCAAGTAGGAGAAGGAATCTTGAAGCACCAATCGATTCATGGTAATGAGTTCAAGGAGTCCATGAGGAAGCGTTTTGTTCCAAAACATTTCCAACGAGACATGGCTCAAAAGCTTCAAGCATTGAAACAAGGCAACAAGTCCGTGGAGGATTATTACAAGGAGATGGATACATTGATGGATCGACTTGATCTAGATGAGGATATGGAGAGTCTCATGGCACGGTTTCTTAATGGGCTAAACACGGAGATTGCAGACAAGGTTGACCTACAACCTTACTCTGACATTGAGGGGTTGTTGCATATTGCAATCAAGATCGAGAGGCAAATCCAACGAACGTCTCGACGGTATTCTTCTAAACATTTTTCCAACTCTAGTTCTACATGGAAAAAGGATAGTAAGAAGATTGAATCTAAGCTTAGAAACCAAGAGATATATGAGAAACCTAAAGCAAATGTAGAGAAAGGGAGAGTTCTAAAAGGGGAAAGAGAAGATAGATGAATCTAATGTGCGAAATAGGGATTTGAAATGTTGGAAATGTCAAGGGGTAGGTCACTATAGTAGAGATTGCCCTAATAGGAGAATTATGACCATTAGAGAGGGAGAGATTGTGACTGATGATGAAGAGGAAGATGAGGTTAAGGAAGAAAATGATGAGAGTGAGAATGAGTTAAGCGAAGAGGATCCTGCAAACTTGTCCTTAGTTGCTAGGAGAGCTTTAAGCACCCAAATTAAGGAGGATAGTCTAGACCAAAGAGAGAACTTGTTTCACACTAGGTGCCTTATTCAATCTATGCCTTGTAGTGTGGTCATTAATAGTGGTAGTTGCACCAATGTTGTGAGTACAATTCTGGTCAAGAGGCTTAATTTAGAGACCAAACCACATCCTAGACCATATAAACTTCAATGGTTGAATGATTGTGCGCAAAGTAAGGGTGAGTAAGCAAGCTCTTGTTTCTTTTACCATTGGAAAGTATAATGATCATGTTTTGTGTGATGTTGTATCCATGCATGCTGGAGATTTATTGTTGGGGAGGCCTTGGCAATTTGATCGTCGGGTAGTATATGATGGGTATGCAAATCGTTACTCTTTTACTTATAATGGTAGAAAAACTACTCTTGTTCCATTGTCTCCAAAAGATGTATTTATTGATCAATGCAAACTTGAAAAAAAGGCAAGAGGCTGATGCAAAAGCAAAAAGTGTGAAAATGAAATAATAGAAAAAGAATCGAGAGAAAAAAAGAGTTTGAGTGAAAAGCAAGAGAGTAGCAATCGGCCTAGAGGAAAAAATGAGAGAAAAGCCAAAATAGTGAGTTTGTATGCTAGGTCAAGTGAGGCTAGGAATGTTTTGCTTTCTAATAGGACCATTCTTGTACTTATGTGCAAAGGGTCTTGTTTCTTTACTAACGAGCTTAACCCTTCTTTTGCCTAGTGTTTTTGTTTTACTTTTGAAGGAGTTTGAAGATTTATTTCCAGAGGAGATGCCTAGTGGTTTGCCACCACTTAGAGGAATTGAGCATAAGATTGACTTCATTCCGGGAGCAACCATTCCAAACCGTCCCAGCATATAGGACTAATCCAAAGGAGGCCGAAGAGATACAAAGGCAAGTGAGTGAACTCCTTGCTAAAGGGTATGTACGTGAGAGTTTGAGTCCATGTTCTATTCCAGTTATTCTTGTGCCTAAGAAAGATGGGTCATGGCGTATGTGTATTGATTGTAGGGCTATAAACAAGATAACTATTAAGTATAGACATCCAATTCCTAGATTAGATGATATGCTTGATGAGTTGCATGGATGTAGTCTCTTTACTAAGATTGATTTGAAATCAGGTTATCATCAAATTCGCATGCATATTGGTGATGAATGGAAAACTGCTTTCAAAACTAAGTATGGCCTTTATGAATGGTTAGTTATGCCTTTTGGATTGACTAATGCACCTAGTACATTCATGAGGTTAATGAATCATGTCTTGCGAGAATACTTAGGGAAGTTTGTGGTTGTCTACTTTGATGATATTCTTGTTTATTCTAAATCCTTAGATGAGCATGTTGAACATGTACGATCTGTTTTGTCTACTTTGAGAAAAGAATGTTTGTATGCAAATTTACAGAAGTGTAGCTTTTGCATGGAAAAAGTTAATTTTCTTGGATTTGTTGTTTCATCTAACGGTGTTGAGGTTGATGAGGAGAAGGTAAAGGCAATAAAAGATTGGCCTACACCTAAAACTGTGAGTGAGGTAAGAAGTTTTCATGGTCTTGCGGGTTTCTATCGTAGGTTCATTAAGGATTTTAGTACCATTGCTTCACCCTTGAATGAACTTGTTAAGAAAAATGTTTCTTTCATATGGGGAAAAGACCAAGAAAATGCTTTTAACACTTTGAAAGAAAAATTGTGTTCATCTCCATTGCTTGCATTACCTAATTTTGAGTTAACCTTTGAAATTGAATGTGATGCTAGTGGTGTAGGAATAGGTGCTGTTTTAAAGCAAAATAACAGACCTTTAATGTTCTTTAGTGAAAAATTGAATGGTGCTTCTTTGAAGTATCCAACATATGACAAAGAACTTTATGCTTTGGTTCGTGCATTACAAACATGGCAACATTATCTTTGGCCTAAGGAGTTCGTTATTCATACGGATCATGAGAGTTTAAAGCATTTGAGAGGACAAAATAAACTCAATCGACGACATGCCAAATGGTTGGAGTTTATTGAAACATTCCCTTATGTGATTAAGTATAAACAAGGTAAGGAGAACATTGTTGCGGATGCTTTATCACGAAGGTATGCTTTACTCAATGCTTTGAATGCTAAGTTGTTAGGGTTTGAACATATAAAGACTTTGTATCCTCATGATGCATTCTTTGCTCCTTTTGTTGAATCTTGTGAAAAAGGACTTGTTGTGGATGATTACATGTTGTTTGATGGATTTTGTTTAGGAAAGGAAAACTTTGCATCCCATCTTGTTCTATTCGTGAGTTATTGGTAAAGGAAGCTCCTGAGGCGGTTTAATGGCGCATTTTGGAGTTTCTAAAACTTATGATATGCTTGTTGAACATTTTTACTGGCCTAAAATGAGGCATGATGTTAATAAAGTTTGTGCTCGATGCATAGCATGTAAACAGGCTAAGTCTAGGCTTCAACCACATGGTTTGTATTCTCCTTTACCCGCTCCTAATGGTCCTTGGATTGATATATCGATGGATTTTGTTTTAGGCTTACCTAGAACTAGGAAAGGTAGAGATAGCATATTTGTTGTGGTCGATAGATTTAGTAAAATGGCACATTTTATTCCTTGTCACAAAACAGATGATGCAAAACTTATCTGACTTATTCTTTAGGAGGTTGTGAGATTGCATGGTATTCCTAAAAGCATAGTTAGTGATCGTGATGTTAAATTTTTAAGCCACTTTTGGCGTGTTTTGTGGGGTAAGTTGGGAACTAAGCTATTGTATTCAACTACATGTCATCCTCAAACGGATGGTCAAACCGAGGTTGTTAATAGAACCATGACTACTATGCTTAGGGCTATTATTGATAAGAATCTTAAGACTTGGGAGGATTGTTTGCCATTCATAGAATTTGCATATAATAGGGCTGTTCATAGCACTACTAAATGCACTCCTTTTGAAATTGTTTATGGCTTTAATCCTTTAACTCCTATTGATTTATTGCCTATGCCCCTAATGAGTTTGTGAGTCTTGATGCGAATGCAAAGGTTGAGTTTGTTCATAAGTTGCACAAGAAAGTTAAAGAGCACATTGAGCAGCAAAATTTCAAGGTTGCTTCAAAAATCAATAAGGGGCGTAAACCCTTAGTCTTCAAACCGGGAGATTGGGTTTGGGTACATTTTCGACAAGAAAGGTTTCCTAATCAAAGAAAATCAAAGCTTTTACCACGAGGAGATGGACCTTTCCAAGTTCTTGAGAGAATCAATGACAATGCTTATAAAATTGATTTACCAGTGAGTATGGTGTTAGTGCAACCTTTAATGTTGCTGACTTGAGTCCTTTTGATGTAGGTGATGGTTATGATTCGAGGCTTAATCCTTCTCAAGAGGGGGAGGATGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA

mRNA sequence

ATGGCCCTCTATTATCTTGTTTCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCGTTGATCAAACTACTTGTGGATGATTCGAATCTTGAGTTTAGAAACAAGTTTTCTCTACTCTTGATCTTGATCATCAAGTTACAACCTGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGTGGAGATGGATTCAATGAAAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGCTTAATCCTTCTCAAGAGGGGGAGGATGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA

Coding sequence (CDS)

ATGGCCCTCTATTATCTTGTTTCTTTGCATTTCTTGTGTTTAGATTTGCATGCTAGGATCATTCAAGTAGCGTTGATCAAACTACTTGTGGATGATTCGAATCTTGAGTTTAGAAACAAGTTTTCTCTACTCTTGATCTTGATCATCAAGTTACAACCTGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGTGGAGATGGATTCAATGAAAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGCTTAATCCTTCTCAAGAGGGGGAGGATGATATGAACCAAGGACCACCTATTGTCATGCCTGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATGTTGGAGTCTTTCCCTACATGTTGTGCAAAGTTGAACTTCAAGATGGAGACGCATTAAATGCATTCTAA

Protein sequence

MALYYLVSLHFLCLDLHARIIQVALIKLLVDDSNLEFRNKFSLLLILIIKLQPDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCKVELQDGDALNAF
Homology
[Close]
BLAST of Tan0016453 vs. NCBI nr
Match: XP_038900633.1 (uncharacterized protein LOC120087799 [Benincasa hispida])

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-17
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0 

Query: 131 NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYML 190
           NPSQE EDD N+G  I+M +G I RSRAKKL QALITHIQAMV+S ++++EDV V  YML
Sbjct: 87  NPSQEEEDDANKGTSIIMSQGSIIRSRAKKL-QALITHIQAMVTSTKDIVEDVRVLSYML 146

Query: 191 CKVELQDGDALNAF 205
           CKVE QD DALNAF
Sbjct: 147 CKVEFQDEDALNAF 159

[Close]
BLAST of Tan0016453 vs. NCBI nr
Match: XP_022158199.1 (uncharacterized protein LOC111024737 [Momordica charantia])

HSP 1 Score: 91.7 bits (226), Expect = 8.1e-15
Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = 0 

Query: 54  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNEN 113
           D+NQG  IVMP+GPITRSR+KK  Q      Q +     E + D   +   L GDG++  
Sbjct: 123 DVNQGSTIVMPQGPITRSRSKKEDQERDGPFQVL-----ERIND-NAYKIDLPGDGYDS- 182

Query: 114 LHARVIQVVLIVPLVELNPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMV 173
                            NPSQE EDD+NQG  IVMP+GPITRSR+KKLQQAL++++Q + 
Sbjct: 183 ---------------RTNPSQEREDDVNQGSTIVMPQGPITRSRSKKLQQALLSYVQYLA 224

Query: 174 SSKE 178
              E
Sbjct: 243 DLVE 224

[Close]
BLAST of Tan0016453 vs. NCBI nr
Match: XP_022159097.1 (uncharacterized protein LOC111025539 [Momordica charantia])

HSP 1 Score: 58.9 bits (141), Expect = 5.8e-05
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 0 

Query: 131 NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDV-GVFPYM 190
           NPS+ GEDDMNQ   + +P GPITRSRAK+LQ A  +HIQA VSS     ED  G   Y 
Sbjct: 492 NPSKGGEDDMNQ-DALALPSGPITRSRAKQLQLAFDSHIQAXVSSTNGHQEDKDGTKLYS 551

Query: 191 LCKVEL 196
            C++ +
Sbjct: 552 WCQMNI 556

[Close]
BLAST of Tan0016453 vs. NCBI nr
Match: XP_022151643.1 (uncharacterized protein LOC111019551 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-04
Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 0 

Query: 131 NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFP-YM 190
           NPS+ G+DDMNQ   + +P  PITRSRAK+LQ A  +HIQ +VS      ED G    Y 
Sbjct: 539 NPSKGGKDDMNQ-DALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKGWKKLYS 598

Query: 191 LCKVELQDGD 200
            C++ ++D D
Sbjct: 599 WCQMNIRDED 607

[Close]
BLAST of Tan0016453 vs. ExPASy TrEMBL
Match: A0A6J1DYP6 (uncharacterized protein LOC111024737 OS=Momordica charantia OX=3673 GN=LOC111024737 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.9e-15
Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = 0 

Query: 54  DMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGDGFNEN 113
           D+NQG  IVMP+GPITRSR+KK  Q      Q +     E + D   +   L GDG++  
Sbjct: 123 DVNQGSTIVMPQGPITRSRSKKEDQERDGPFQVL-----ERIND-NAYKIDLPGDGYDS- 182

Query: 114 LHARVIQVVLIVPLVELNPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMV 173
                            NPSQE EDD+NQG  IVMP+GPITRSR+KKLQQAL++++Q + 
Sbjct: 183 ---------------RTNPSQEREDDVNQGSTIVMPQGPITRSRSKKLQQALLSYVQYLA 224

Query: 174 SSKE 178
              E
Sbjct: 243 DLVE 224

[Close]
BLAST of Tan0016453 vs. ExPASy TrEMBL
Match: A0A2N9GT99 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30511 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 0 

Query: 54  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAM--VSSKEEVLEDVGVFPYMLC 113
           D NQG      P+ +P+GPITRSRAKK+++A+   +Q+    +SK   ++ V + P  + 
Sbjct: 701 DGNQGGPSLKDPLQVPDGPITRSRAKKIKEAMQGLVQSTWDEASKSPTIK-VDLMPLPVD 760

Query: 114 G----DG-----FNENLHARVI----QVVLIVPLVELNPSQEGED-----------DMNQ 173
           G    DG       ++LH RV+    +V     + +L+P   GED           D NQ
Sbjct: 761 GRSSLDGQKKAELVKSLHERVLPGEYKVYATFNVFDLSPFDVGEDSWSNPFEERGNDGNQ 820

Query: 174 G-----PPIVMPEGPITRSRAKKLQQALITHIQAMVSSKE 178
           G      P+ +P+GPITRSRAKK+++A+    Q +V  K+
Sbjct: 821 GGPSLKDPLQVPDGPITRSRAKKIKEAM----QGLVQCKD 855

[Close]
BLAST of Tan0016453 vs. ExPASy TrEMBL
Match: A0A2N9HSZ8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43304 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06
Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 0 

Query: 54  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMV------SSKEEVLEDVGVFP 113
           D NQG      P+ +P+GPITRSRAKK+++A+   +Q  +       SK   L   G  P
Sbjct: 614 DGNQGGPSLKDPLQVPDGPITRSRAKKIKEAMQGLVQLGMKLARAQQSKRSKLHPRGDGP 673

Query: 114 YMLCGDGFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQG-----PPIVMPEGPITRSR 172
           + +      E ++    +V L       NP +E  +D NQG      P+ +P+GPITRSR
Sbjct: 674 FQIL-----EKINDNAYKVDLPGEDSWSNPFEERGNDGNQGGPSLKDPLQVPDGPITRSR 733

[Close]
BLAST of Tan0016453 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.8e-05
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 0 

Query: 131 NPSQEGEDDMNQGPPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDV-GVFPYM 190
           NPS+ GEDDMNQ   + +P GPITRSRAK+LQ A  +HIQA VSS     ED  G   Y 
Sbjct: 492 NPSKGGEDDMNQ-DALALPSGPITRSRAKQLQLAFDSHIQAXVSSTNGHQEDKDGTKLYS 551

Query: 191 LCKVEL 196
            C++ +
Sbjct: 552 WCQMNI 556

[Close]
BLAST of Tan0016453 vs. ExPASy TrEMBL
Match: A0A2N9E446 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1578 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-04
Identity = 44/128 (34.38%), Postives = 67/128 (52.34%), Query Frame = 0 

Query: 54  DMNQG-----PPIVMPEGPITRSRAKKLQQALITHIQAMVSSKEEVLEDVGVFPYMLCGD 113
           D NQG      P+ +P+GPITRSRAKK+++A+    Q +V S     ++    P +  G 
Sbjct: 10  DGNQGGPSLKDPLQVPDGPITRSRAKKIKEAM----QGLVQS---TWDEASKSPTIKVGL 69

Query: 114 GFNENLHARVIQVVLIVPLVELNPSQEGEDDMNQGPP-----IVMPEGPITRSRAKKLQQ 172
              E +   +IQ V            +  +D NQG P     + +P GPITRSRAKK+++
Sbjct: 70  KEGEPILIHLIQAV---------EDNDLGNDGNQGGPSLKDHLQVPNGPITRSRAKKIKE 121

The following BLAST results are available for this feature:
BLAST of Tan0016453 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0016453 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900633.11.7e-1770.27uncharacterized protein LOC120087799 [Benincasa hispida][more]
XP_022158199.18.1e-1545.16uncharacterized protein LOC111024737 [Momordica charantia][more]
XP_022159097.15.8e-0553.03uncharacterized protein LOC111025539 [Momordica charantia][more]
XP_022151643.14.9e-0447.14uncharacterized protein LOC111019551 [Momordica charantia][more]
BLAST of Tan0016453 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DYP63.9e-1545.16uncharacterized protein LOC111024737 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A2N9GT992.5e-0634.38Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
A0A2N9HSZ82.5e-0635.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43304 PE=4 SV=1[more]
A0A6J1DYV92.8e-0553.03uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A2N9E4461.8e-0434.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1578 PE=4 SV=1[more]
BLAST of Tan0016453 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0016453.1Tan0016453.1mRNA