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Tan0016411 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAAAAAAAATAATAAAATAAATAAATAAATAAACTTCCACTCAAGTTTTGTCTTTTAGGGTAGGCCCCATTTCTGCACTCCTTTACTACCCTCATTATTGTACTCCCTCTGTTCTAATTTCTTCTTCATTTATTCTGATCAGAACCCCTTTTCATTTCGCCGGCAAACATGACGGAATCCGGCGGCTGTTGCCGCTGCTGCTTCAGCTTCATCTTAACTTCCGGCTTTGCAGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAGCCCAAATGCTCCATCGAATTTTTCTACATTCCAGCCCTTAATCAGTCCCTTAATTCCTCCTCAAATTCCACCGTCATCTTCGATCTGCGCCTCAAGAACCAGAACAAAGACAAGTCCGTCTTCTACGACGCTATCGATCTCAACCTGACTCTCGTCGGAGCGGCGGACGGCACCCGGCGCCCCGTGGCGAACTTGACGGAGGCCGGATTCCACCAGGGTCGCGACAAGAAGGCCTTCAGAAAGGAGACCGTCCAAGCCCCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTCGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAGGGAGAATTTGAGAGTCGGGGCACAGTTCAAAGTCAACGGGCAGGGGGCAAAGGAAAACCCAGATGGGATTACGCTCAGCTCCGGCGCCGGCGTGCACGGCGGCTCGCCGGTGAGAATCCTTTGGAGTTCTTGGGTGTTGGTTTTGTGGAAATTTTTGTGAAATTTTGGATGGAAATTTGGGAGGTTTTGAATTGAACTGTTTTCTTGTGGTGGGTTTGTTCTCTTCTGTTTGTTTGATGTTATTTGGAGGAAATTTTGGGCGGCGTTTTTTTTTTTAAGAAATTAATTTGTGGTTAAATTA GGCAAAAAAAATAATAAAATAAATAAATAAATAAACTTCCACTCAAGTTTTGTCTTTTAGGGTAGGCCCCATTTCTGCACTCCTTTACTACCCTCATTATTGTACTCCCTCTGTTCTAATTTCTTCTTCATTTATTCTGATCAGAACCCCTTTTCATTTCGCCGGCAAACATGACGGAATCCGGCGGCTGTTGCCGCTGCTGCTTCAGCTTCATCTTAACTTCCGGCTTTGCAGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAGCCCAAATGCTCCATCGAATTTTTCTACATTCCAGCCCTTAATCAGTCCCTTAATTCCTCCTCAAATTCCACCGTCATCTTCGATCTGCGCCTCAAGAACCAGAACAAAGACAAGTCCGTCTTCTACGACGCTATCGATCTCAACCTGACTCTCGTCGGAGCGGCGGACGGCACCCGGCGCCCCGTGGCGAACTTGACGGAGGCCGGATTCCACCAGGGTCGCGACAAGAAGGCCTTCAGAAAGGAGACCGTCCAAGCCCCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTCGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAGGGAGAATTTGAGAGTCGGGGCACAGTTCAAAGTCAACGGGCAGGGGGCAAAGGAAAACCCAGATGGGATTACGCTCAGCTCCGGCGCCGGCGTGCACGGCGGCTCGCCGGTGAGAATCCTTTGGAGTTCTTGGGTGTTGGTTTTGTGGAAATTTTTGTGAAATTTTGGATGGAAATTTGGGAGGTTTTGAATTGAACTGTTTTCTTGTGGTGGGTTTGTTCTCTTCTGTTTGTTTGATGTTATTTGGAGGAAATTTTGGGCGGCGTTTTTTTTTTTAAGAAATTAATTTGTGGTTAAATTA ATGACGGAATCCGGCGGCTGTTGCCGCTGCTGCTTCAGCTTCATCTTAACTTCCGGCTTTGCAGCTCTGTTCTTATGGCTCAGCCTTCGAACCCACAAGCCCAAATGCTCCATCGAATTTTTCTACATTCCAGCCCTTAATCAGTCCCTTAATTCCTCCTCAAATTCCACCGTCATCTTCGATCTGCGCCTCAAGAACCAGAACAAAGACAAGTCCGTCTTCTACGACGCTATCGATCTCAACCTGACTCTCGTCGGAGCGGCGGACGGCACCCGGCGCCCCGTGGCGAACTTGACGGAGGCCGGATTCCACCAGGGTCGCGACAAGAAGGCCTTCAGAAAGGAGACCGTCCAAGCCCCCGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGGTTTTCCGGCTCGATTTGGCGACGGCGGTCAGGTACAAGATCTTGTTCTGGAAGACCAAGAGGGAGAATTTGAGAGTCGGGGCACAGTTCAAAGTCAACGGGCAGGGGGCAAAGGAAAACCCAGATGGGATTACGCTCAGCTCCGGCGCCGGCGTGCACGGCGGCTCGCCGGTGAGAATCCTTTGGAGTTCTTGGGTGTTGGTTTTGTGGAAATTTTTGTGA MTESGGCCRCCFSFILTSGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLNSSSNSTVIFDLRLKNQNKDKSVFYDAIDLNLTLVGAADGTRRPVANLTEAGFHQGRDKKAFRKETVQAPGVDWKAVSRNGSAVFRLDLATAVRYKILFWKTKRENLRVGAQFKVNGQGAKENPDGITLSSGAGVHGGSPVRILWSSWVLVLWKFL Homology
BLAST of Tan0016411 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.9e-38 Identity = 92/202 (45.54%), Postives = 117/202 (57.92%), Query Frame = 0
BLAST of Tan0016411 vs. NCBI nr
Match: XP_038897087.1 (protein NDR1-like [Benincasa hispida]) HSP 1 Score: 342.0 bits (876), Expect = 3.5e-90 Identity = 166/206 (80.58%), Postives = 180/206 (87.38%), Query Frame = 0
BLAST of Tan0016411 vs. NCBI nr
Match: XP_022139632.1 (protein NDR1-like [Momordica charantia]) HSP 1 Score: 334.7 bits (857), Expect = 5.5e-88 Identity = 171/205 (83.41%), Postives = 178/205 (86.83%), Query Frame = 0
BLAST of Tan0016411 vs. NCBI nr
Match: KAG7024897.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87 Identity = 167/205 (81.46%), Postives = 180/205 (87.80%), Query Frame = 0
BLAST of Tan0016411 vs. NCBI nr
Match: XP_023535135.1 (protein NDR1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 332.0 bits (850), Expect = 3.6e-87 Identity = 166/204 (81.37%), Postives = 178/204 (87.25%), Query Frame = 0
BLAST of Tan0016411 vs. NCBI nr
Match: XP_022935836.1 (protein NDR1-like [Cucurbita moschata]) HSP 1 Score: 332.0 bits (850), Expect = 3.6e-87 Identity = 166/205 (80.98%), Postives = 179/205 (87.32%), Query Frame = 0
BLAST of Tan0016411 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.7e-88 Identity = 171/205 (83.41%), Postives = 178/205 (86.83%), Query Frame = 0
BLAST of Tan0016411 vs. ExPASy TrEMBL
Match: A0A6J1F5U5 (protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.7e-87 Identity = 166/205 (80.98%), Postives = 179/205 (87.32%), Query Frame = 0
BLAST of Tan0016411 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 1.9e-86 Identity = 165/204 (80.88%), Postives = 177/204 (86.76%), Query Frame = 0
BLAST of Tan0016411 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83 Identity = 158/207 (76.33%), Postives = 175/207 (84.54%), Query Frame = 0
BLAST of Tan0016411 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83 Identity = 158/207 (76.33%), Postives = 175/207 (84.54%), Query Frame = 0
BLAST of Tan0016411 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39 Identity = 92/202 (45.54%), Postives = 117/202 (57.92%), Query Frame = 0
BLAST of Tan0016411 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 146.0 bits (367), Expect = 3.4e-35 Identity = 84/179 (46.93%), Postives = 107/179 (59.78%), Query Frame = 0
BLAST of Tan0016411 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative ) HSP 1 Score: 121.7 bits (304), Expect = 6.9e-28 Identity = 79/193 (40.93%), Postives = 110/193 (56.99%), Query Frame = 0
BLAST of Tan0016411 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 51.6 bits (122), Expect = 8.7e-07 Identity = 42/170 (24.71%), Postives = 73/170 (42.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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