Tan0016330 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATAATGTAATGTTTGAAGCACCAAGTAGCCTAATTACAAAGCATAACACTTGCATTTTTCTAACTGATCAGCTTTGTTAACCAAAAAATGGCCAACTCTAAAACCCTTCTCCTTCTCGGCCTCCTCCTCGCTCTTCTCTTCGTCTCCTCTCGTGTCTCGGCTCGTCTACTCGGTTAGTTTGCTCGAAACCGAACTCTCTCTTTCTCATTATTTTGTTAAGAACATATTAAAATTAATAAGATCAAATTTAATTTGTTTTCATGTTACTAGTTTTTGTGTATTATGCTTTGTAATTTAGTGTGATATTAAAGTATAGATCATAAACTTAAATTTGTTGTTGTGTTTCTCTTCATTTTGTAAAATAGTCAGTAAGTTGAATCTCATATTGATTATCAAACTCACATGCGAATGAATAGTCGAATTTAGATGGATTTTGTAATTATATTAATTTTTTTATTTAGTTAAGCTTTTAGGTCTATAGCAATAATTTAGCAATATTATTTGAACTCTGTTTTTATTCATTATATATGTAGAGGAAAAGAAAGGTGATGTAGAGAGTGACGGTCATGGACACCATGACCACCACGACCACGGCCACCATGACCACGGCCACCATGGTCATGACCACGACGATGCTGATGTCGATAGCTTGGACGATCACCATGGACACCACGACCATGACCACGACCACGACCACGGGCACCACCACGGTGGACACCACGGTCACGATGCCGACGTAAATGACTTAGATGGTCACCATGGACACCATGACCACGGACATCACGACCATGGACACCACGGCCACGACCACGATGCAGAAACTCAAGGGGTTAAGAATTAGAGACCTAAAATCAGCACCCTGTCTTCTACATGGTTGGTAATAATAAAAATAGGGTACGATGAAATAAATTATGTTTTGTGTGTGTGTTTTAATTTAAATAAAGCAAAGATTGCTGTATGAAATGCTAGTTTGGTTTGTTGTAATTTCCGATCCTTATGGTTTTTATAAATATGTAATATCAAAACTATAAAGTTGATTTGTTTTGTATGCTGCTGGTTATTTCATTATTATTGGGTTTGTTTATGATTTTGGTGCCTTTCTCTTTAACTCTCATTTCAAACGCTGTCTATATTTTCCTTCTTTGTAGAGTATTACAATTGAAATAAGAATAAAGATTTAA TGATAATGTAATGTTTGAAGCACCAAGTAGCCTAATTACAAAGCATAACACTTGCATTTTTCTAACTGATCAGCTTTGTTAACCAAAAAATGGCCAACTCTAAAACCCTTCTCCTTCTCGGCCTCCTCCTCGCTCTTCTCTTCGTCTCCTCTCGTGTCTCGGCTCGTCTACTCGAGGAAAAGAAAGGTGATGTAGAGAGTGACGGTCATGGACACCATGACCACCACGACCACGGCCACCATGACCACGGCCACCATGGTCATGACCACGACGATGCTGATGTCGATAGCTTGGACGATCACCATGGACACCACGACCATGACCACGACCACGACCACGGGCACCACCACGGTGGACACCACGGTCACGATGCCGACGTAAATGACTTAGATGGTCACCATGGACACCATGACCACGGACATCACGACCATGGACACCACGGCCACGACCACGATGCAGAAACTCAAGGGGTTAAGAATTAGAGACCTAAAATCAGCACCCTGTCTTCTACATGGTTGGTAATAATAAAAATAGGGTACGATGAAATAAATTATGTTTTGTGTGTGTGTTTTAATTTAAATAAAGCAAAGATTGCTGTATGAAATGCTAGTTTGGTTTGTTGTAATTTCCGATCCTTATGGTTTTTATAAATATGTAATATCAAAACTATAAAGTTGATTTGTTTTGTATGCTGCTGGTTATTTCATTATTATTGGGTTTGTTTATGATTTTGGTGCCTTTCTCTTTAACTCTCATTTCAAACGCTGTCTATATTTTCCTTCTTTGTAGAGTATTACAATTGAAATAAGAATAAAGATTTAA ATGGCCAACTCTAAAACCCTTCTCCTTCTCGGCCTCCTCCTCGCTCTTCTCTTCGTCTCCTCTCGTGTCTCGGCTCGTCTACTCGAGGAAAAGAAAGGTGATGTAGAGAGTGACGGTCATGGACACCATGACCACCACGACCACGGCCACCATGACCACGGCCACCATGGTCATGACCACGACGATGCTGATGTCGATAGCTTGGACGATCACCATGGACACCACGACCATGACCACGACCACGACCACGGGCACCACCACGGTGGACACCACGGTCACGATGCCGACGTAAATGACTTAGATGGTCACCATGGACACCATGACCACGGACATCACGACCATGGACACCACGGCCACGACCACGATGCAGAAACTCAAGGGGTTAAGAATTAG MANSKTLLLLGLLLALLFVSSRVSARLLEEKKGDVESDGHGHHDHHDHGHHDHGHHGHDHDDADVDSLDDHHGHHDHDHDHDHGHHHGGHHGHDADVNDLDGHHGHHDHGHHDHGHHGHDHDAETQGVKN Homology
BLAST of Tan0016330 vs. NCBI nr
Match: KAG7024647.1 (hypothetical protein SDJN02_13465, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 150.2 bits (378), Expect = 1.2e-32 Identity = 103/146 (70.55%), Postives = 107/146 (73.29%), Query Frame = 0
BLAST of Tan0016330 vs. NCBI nr
Match: KAG6591765.1 (hypothetical protein SDJN03_14111, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32 Identity = 102/146 (69.86%), Postives = 107/146 (73.29%), Query Frame = 0
BLAST of Tan0016330 vs. NCBI nr
Match: XP_023536482.1 (histidine-rich glycoprotein-like [Cucurbita pepo subsp. pepo] >XP_023536484.1 histidine-rich glycoprotein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 146.4 bits (368), Expect = 1.8e-31 Identity = 101/144 (70.14%), Postives = 105/144 (72.92%), Query Frame = 0
BLAST of Tan0016330 vs. NCBI nr
Match: XP_022935989.1 (histidine-rich glycoprotein-like [Cucurbita moschata]) HSP 1 Score: 144.8 bits (364), Expect = 5.1e-31 Identity = 99/138 (71.74%), Postives = 106/138 (76.81%), Query Frame = 0
BLAST of Tan0016330 vs. NCBI nr
Match: XP_038900076.1 (histidine-rich glycoprotein-like [Benincasa hispida]) HSP 1 Score: 139.0 bits (349), Expect = 2.8e-29 Identity = 102/140 (72.86%), Postives = 106/140 (75.71%), Query Frame = 0
BLAST of Tan0016330 vs. ExPASy TrEMBL
Match: A0A6J1F6Z7 (histidine-rich glycoprotein-like OS=Cucurbita moschata OX=3662 GN=LOC111442725 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.5e-31 Identity = 99/138 (71.74%), Postives = 106/138 (76.81%), Query Frame = 0
BLAST of Tan0016330 vs. ExPASy TrEMBL
Match: A0A6J1IKT3 (histidine-rich glycoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111476525 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29 Identity = 99/153 (64.71%), Postives = 103/153 (67.32%), Query Frame = 0
BLAST of Tan0016330 vs. ExPASy TrEMBL
Match: A0A6J1CBC6 (histidine-rich membrane protein KE4 homolog 2-like OS=Momordica charantia OX=3673 GN=LOC111009957 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 2.2e-27 Identity = 97/142 (68.31%), Postives = 102/142 (71.83%), Query Frame = 0
BLAST of Tan0016330 vs. ExPASy TrEMBL
Match: A0A6J1J1J4 (histidine-rich glycoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111480431 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11 Identity = 85/168 (50.60%), Postives = 91/168 (54.17%), Query Frame = 0
BLAST of Tan0016330 vs. ExPASy TrEMBL
Match: A0A6J1FL97 (prostatic spermine-binding protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446778 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.0e-08 Identity = 85/172 (49.42%), Postives = 93/172 (54.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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