Tan0016310 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCTTTAAGTAAGAGATTGGCCATCGCCCAAAGGCGGCTCATTGAGCCGGTCATCGGTTGCTAAGAGCCTTTCCTCACTTTAGAAGAAAAGCCACTTGATTTTATTATTAGTAAGGGGACGAATATTCGTTGTATATCTATATTGGACTTTCGATTTTGCGTTGTTTTTTTTCAGTATATATAATCCAATGTTCAGTGAGATGACTTTCCTACTGACGGAATCGCTTGAATTAGTTGAAGGAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTTTTGACAGCGAGGGAGGCAGTTCCGAAGCAAGTGTCAATCAGCCACATCCTAATTCTGACGTCCCTTCGAATCCTAACCGCGCTGGTCGTAATAGATCGACTTTCAAGTTATAACATTTGAATTTCTCTGACATTCTACGTTCCCGAAACGGATCCTATCAAATATTTCACATTTTCGATGATCATCTCTATTTTAGGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCAGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCATTCAAGGTTAA TTTTCTTTAAGTAAGAGATTGGCCATCGCCCAAAGGCGGCTCATTGAGCCGGTCATCGGTTGCTAAGAGCCTTTCCTCACTTTAGAAGAAAAGCCACTTGATTTTATTATTAGTAAGGGGACGAATATTCGTTGTATATCTATATTGGACTTTCGATTTTGCGTTGTTTTTTTTCAGTATATATAATCCAATGTTCAGTGAGATGACTTTCCTACTGACGGAATCGCTTGAATTAGTTGAAGGAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTTTTGACAGCGAGGGAGGCAGTTCCGAAGCAAGTGTCAATCAGCCACATCCTAATTCTGACGTCCCTTCGAATCCTAACCGCGCTGGTCGTAATAGATCGACTTTCAAGTTATAACATTTGAATTTCTCTGACATTCTACGTTCCCGAAACGGATCCTATCAAATATTTCACATTTTCGATGATCATCTCTATTTTAGGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCAGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCATTCAAGGTTAA ATGATCATCTCTATTTTAGGTATTCGGGGAATCCTCCTTAATAGACGAAATATTCCTATTATGTCAATGCCAATTGAATCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTCCGTTTCTTCGGATGATATGATGGGTCAATCATTTGCTTCATTGGTTCCAACGGTGGCAGCAGCGGAATCCGCTATTGGGTTAGCCATTTTCGTTATTACTTTCCGAGTCCGAGGGACTATTGCTGTAGAATTTATTAATAGCATTCAAGGTTAA MIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG Homology
BLAST of Tan0016310 vs. ExPASy Swiss-Prot
Match: Q04614 (NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L PE=1 SV=2) HSP 1 Score: 132.5 bits (332), Expect = 2.4e-30 Identity = 80/90 (88.89%), Postives = 80/90 (88.89%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy Swiss-Prot
Match: P26851 (NADH-ubiquinone oxidoreductase chain 4L OS=Marchantia polymorpha OX=3197 GN=ND4L PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.2e-25 Identity = 68/90 (75.56%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy Swiss-Prot
Match: Q37627 (NADH-ubiquinone oxidoreductase chain 4L OS=Prototheca wickerhamii OX=3111 GN=ND4L PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 4.1e-22 Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy Swiss-Prot
Match: B6ISX1 (NADH-quinone oxidoreductase subunit K OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=nuoK PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 6.8e-17 Identity = 51/85 (60.00%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy Swiss-Prot
Match: Q6N5N4 (NADH-quinone oxidoreductase subunit K 1 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=nuoK1 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16 Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 0
BLAST of Tan0016310 vs. NCBI nr
Match: YP_009504857.1 (Nad4L, partial [Senna occidentalis] >AWW13976.1 Nad4L, partial [Senna occidentalis]) HSP 1 Score: 160.2 bits (404), Expect = 8.2e-36 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. NCBI nr
Match: YP_009498153.1 (NADH dehydrogenase subunit 4L [Senna tora] >YP_009498157.1 NADH dehydrogenase subunit 4L [Senna tora] >AWW13955.1 NADH dehydrogenase subunit 4L [Senna tora] >AWW13959.1 NADH dehydrogenase subunit 4L [Senna tora] >QVD39131.1 NADH dehydrogenase subunit 4L [Gleditsia sinensis]) HSP 1 Score: 160.2 bits (404), Expect = 8.2e-36 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. NCBI nr
Match: YP_009045755.1 (NADH dehydrogenase subunit 4L [Batis maritima] >YP_009704679.1 NADH dehydrogenase subunit 4L [Tamarindus indica] >YP_009704697.1 NADH dehydrogenase subunit 4L [Libidibia coriaria] >YP_009704759.1 NADH dehydrogenase subunit 4L [Haematoxylum brasiletto] >YP_009913610.1 NADH dehydrogenase subunit 4L [Luffa acutangula] >YP_010137165.1 NADH dehydrogenase subunit 4L [Tolypanthus maclurei] >QEX95849.1 NADH dehydrogenase subunit 4L [Cercis canadensis] >QXE45539.1 NADH dehydrogenase subunit 4L [Ceratonia siliqua] >AIC83358.1 NADH dehydrogenase subunit 4L [Batis maritima] >QEX95882.1 NADH dehydrogenase subunit 4L [Tamarindus indica] >QEX95900.1 NADH dehydrogenase subunit 4L [Libidibia coriaria]) HSP 1 Score: 160.2 bits (404), Expect = 8.2e-36 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. NCBI nr
Match: YP_004849353.1 (NADH dehydrogenase subunit 4L [Cucumis sativus] >ADZ10780.1 NADH dehydrogenase subunit 4L [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 1.4e-35 Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. NCBI nr
Match: YP_009153941.1 (NADH dehydrogenase subunit 4L [Gossypium hirsutum] >YP_009153974.1 NADH dehydrogenase subunit 4L [Gossypium harknessii] >YP_009177636.1 NADH dehydrogenase subunit 4L [Gossypium barbadense] >YP_009250133.1 NADH dehydrogenase subunit 4L [Gossypium raimondii] >AFO69215.1 NADH dehydrogenase subunit 4L [Gossypium hirsutum] >AFV48371.1 NADH dehydrogenase subunit 4L [Gossypium harknessii] >AGA54178.1 NADH dehydrogenase subunit 4L [Gossypium hirsutum] >AGA54212.1 NADH dehydrogenase subunit 4L [Gossypium harknessii] >AKQ51107.1 NADH dehydrogenase subunit 4L [Gossypium barbadense]) HSP 1 Score: 157.9 bits (398), Expect = 4.1e-35 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy TrEMBL
Match: A0A2Z4HGP5 (NADH-ubiquinone oxidoreductase chain 4L OS=Senna tora OX=362788 GN=nad4L PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy TrEMBL
Match: A0A7D6BYE9 (NADH dehydrogenase subunit 4L OS=Luffa acutangula OX=56866 GN=nad4L PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy TrEMBL
Match: A0A5J6NGJ1 (NADH dehydrogenase subunit 4L OS=Cercis canadensis OX=49801 GN=nad4L PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy TrEMBL
Match: A0A2Z4HGN9 (Nad4L (Fragment) OS=Senna occidentalis OX=126820 GN=nad4L PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. ExPASy TrEMBL
Match: A0A068BHL8 (NADH dehydrogenase subunit 4L OS=Batis maritima OX=4436 GN=nad4L PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.0e-36 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Tan0016310 vs. TAIR 10
Match: ATMG00650.1 (NADH dehydrogenase subunit 4L ) HSP 1 Score: 157.9 bits (398), Expect = 3.8e-39 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Tan0016310 vs. TAIR 10
Match: ATCG01070.1 (NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ) HSP 1 Score: 40.4 bits (93), Expect = 8.8e-04 Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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