Tan0016260 (gene) Snake gourd v1

Overview


Name	Tan0016260
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	transcription factor PRE3-like
Location	LG05: 71429821 .. 71430358 (-)
RNA-Seq Expression	Tan0016260
Synteny	Tan0016260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGCAGATCTCGTTCAAGGCAATCAGGTCCTGTACGAATCAGCGATGAGCAGATCACTGACCTCGTTCACAAGCTGCAACAGCTCTTGCCCGAGATTCGTAACCGCCACTCTGATAAGGTACATATGTGTTATAATTTAACATGATATCATAGCAAGAATTTTCGAGAATCAATTTTAGTCTTTTGGGTTCGAGTGTGATTTAATTGTAAATGTTGAAGAACGCAAGATTTAAGATAGGTCCATTATGAGGAGAAATTATTTGAGGAGACATCGTAATATGGTGGATGGTTATATATAAGAGAAAAAATAGATAAGTATTTTAATTTTTGCCTTGTGATAGAAAGTTGATTGATTTGATTGTTTCTTTTTTGGTTTTTTTAAGGTTTCAGCTGCGAAGGTTTTGCAAGAGACATGCAATTACATTCGAAGCCTACTCAGAGAAGTGGACGATCTGAGTGAGAGACTGTCGGAGTTGTTGGCGACATCGGACACGGCCCAAGCAGCCATTATAAGAAGCTTGCTCACGCAGTGA

mRNA sequence

ATGTCTGGCAGATCTCGTTCAAGGCAATCAGGTCCTGTACGAATCAGCGATGAGCAGATCACTGACCTCGTTCACAAGCTGCAACAGCTCTTGCCCGAGATTCGTAACCGCCACTCTGATAAGGTTTCAGCTGCGAAGGTTTTGCAAGAGACATGCAATTACATTCGAAGCCTACTCAGAGAAGTGGACGATCTGAGTGAGAGACTGTCGGAGTTGTTGGCGACATCGGACACGGCCCAAGCAGCCATTATAAGAAGCTTGCTCACGCAGTGA

Coding sequence (CDS)

ATGTCTGGCAGATCTCGTTCAAGGCAATCAGGTCCTGTACGAATCAGCGATGAGCAGATCACTGACCTCGTTCACAAGCTGCAACAGCTCTTGCCCGAGATTCGTAACCGCCACTCTGATAAGGTTTCAGCTGCGAAGGTTTTGCAAGAGACATGCAATTACATTCGAAGCCTACTCAGAGAAGTGGACGATCTGAGTGAGAGACTGTCGGAGTTGTTGGCGACATCGGACACGGCCCAAGCAGCCATTATAAGAAGCTTGCTCACGCAGTGA

Protein sequence

MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLREVDDLSERLSELLATSDTAQAAIIRSLLTQ

Homology

[Close]

BLAST of Tan0016260 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.0e-28
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MSG-RSRSRQ-SGPVRISDEQITDLVHKLQQLLPEIR-NRHSDKVSAAKVLQETCNYIRS 60
          MSG RSRSRQ SG  RIS++QI DL+ KLQQLLPE+R +R SDKVSAA+VLQ+TCNYIR+
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LLREVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          L REVDDLSERLSELLA SDTAQAA+IRSLLTQ
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of Tan0016260 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-26
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MSGR--SRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL 60
          MS R  SRSRQSG  RISD+QI+DLV KLQ L+PE+R R SDKVSA+KVLQETCNYIR+L
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 LREVDDLSERLSELLATSD--TAQAAIIRSLL 89
           REVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of Tan0016260 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.7e-26
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 2  SGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLRE 61
          S RSRSRQSG  RI+DEQI+DLV KLQ LLPE R R +D+V +++VLQETCNYIRSL +E
Sbjct: 3  SRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQE 62

Query: 62 VDDLSERLSELLATSD--TAQAAIIRSLL 89
          VDDLSERLSELLATSD  +AQAAIIRSLL
Sbjct: 63 VDDLSERLSELLATSDMSSAQAAIIRSLL 91

[Close]

BLAST of Tan0016260 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.7e-26
Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 2  SGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLRE 61
          S RSRSRQSG  RI+DEQI+DLV KLQ LLPE R R +D+V +++VLQETCNYIRSL +E
Sbjct: 3  SRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQE 62

Query: 62 VDDLSERLSELLATSD--TAQAAIIRSLL 89
          VDDLSERLSELLATSD  +AQAAIIRSLL
Sbjct: 63 VDDLSERLSELLATSDMSSAQAAIIRSLL 91

[Close]

BLAST of Tan0016260 vs. ExPASy Swiss-Prot
Match: A2Z730 (Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-24
Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MS RSRSR S   RI+DEQI DLV KLQ LLPE R R +D+V +A+VLQETC+YIRSL R
Sbjct: 1  MSSRSRSRASSAARITDEQIGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSLHR 60

Query: 61 EVDDLSERLSELLATSD--TAQAAIIRSLL 89
          EVDDLSERL+ELLA +D  TAQAA+IR LL
Sbjct: 61 EVDDLSERLAELLAAADVSTAQAAVIRGLL 90

[Close]

BLAST of Tan0016260 vs. NCBI nr
Match: KAG6573012.1 (putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSGRSRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. NCBI nr
Match: XP_004152438.1 (transcription factor PRE3 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSGRSRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. NCBI nr
Match: XP_022955105.1 (transcription factor PRE3-like [Cucurbita moschata])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSGRSRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. NCBI nr
Match: XP_023542851.1 (transcription factor PRE3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-35
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSGRSRSRQS  +RISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGRSRSRQSSAIRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. NCBI nr
Match: XP_016899225.1 (PREDICTED: transcription factor PRE3-like [Cucumis melo] >XP_038895619.1 transcription factor PRE3-like [Benincasa hispida])

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-35
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSGRSRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. ExPASy TrEMBL
Match: A0A0A0LQQ1 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045430 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSGRSRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGRSRSRQSSSVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. ExPASy TrEMBL
Match: A0A6J1GU92 (transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111457173 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSGRSRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGRSRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. ExPASy TrEMBL
Match: A0A1S4DU40 (transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103482850 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.7e-36
Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSGRSRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGRSRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. ExPASy TrEMBL
Match: A0A6J1K5U5 (transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111490325 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.4e-35
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLR 60
          MSG SRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL R
Sbjct: 1  MSGISRSRQSSAVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 61 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 90

[Close]

BLAST of Tan0016260 vs. ExPASy TrEMBL
Match: A0A5D3BJ22 (Transcription factor PRE3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003000 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.1e-33
Identity = 83/86 (96.51%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 5  SRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLLREVDD 64
          SRSRQS  VRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL REVDD
Sbjct: 6  SRSRQSSGVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSLHREVDD 65

Query: 65 LSERLSELLATSDTAQAAIIRSLLTQ 91
          LSERLSELLATSDTAQAAIIRSLLTQ
Sbjct: 66 LSERLSELLATSDTAQAAIIRSLLTQ 91

[Close]

BLAST of Tan0016260 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 124.8 bits (312), Expect = 3.5e-29
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MSG-RSRSRQ-SGPVRISDEQITDLVHKLQQLLPEIR-NRHSDKVSAAKVLQETCNYIRS 60
          MSG RSRSRQ SG  RIS++QI DL+ KLQQLLPE+R +R SDKVSAA+VLQ+TCNYIR+
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LLREVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          L REVDDLSERLSELLA SDTAQAA+IRSLLTQ
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of Tan0016260 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 8.7e-28
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MSGR--SRSRQSGPVRISDEQITDLVHKLQQLLPEIRNRHSDKVSAAKVLQETCNYIRSL 60
          MS R  SRSRQSG  RISD+QI+DLV KLQ L+PE+R R SDKVSA+KVLQETCNYIR+L
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 LREVDDLSERLSELLATSD--TAQAAIIRSLL 89
           REVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of Tan0016260 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 108.2 bits (269), Expect = 3.4e-24
Identity = 60/90 (66.67%), Postives = 76/90 (84.44%), Query Frame = 0


Query: 2  SGRSRSRQSGPVRISDEQITDLVHKLQQLLPEI-RNRHSDKVSAAKVLQETCNYIRSLLR 61
          S +SRSRQ+G   I+DEQI DLV +L +LLPE+  NR S KVSA++VLQETC+YIR+L +
Sbjct: 3  SRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSK 62

Query: 62 EVDDLSERLSELLATSDTAQAAIIRSLLTQ 91
          EVDDLSERLS+LL ++D+AQAA+IRSLL Q
Sbjct: 63 EVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of Tan0016260 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 97.4 bits (241), Expect = 6.1e-21
Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1  MSGRSRSRQSGPVRISDEQITDLVHKLQQLLPEI-RNRHSDKVSAAKVLQETCNYIRSLL 60
          MS R   + S   RISD Q+ DLV KL+Q+LPEI + R SDK SA+KVLQETCNYIR+L 
Sbjct: 1  MSNRRSRQSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLN 60

Query: 61 REVDDLSERLSELLAT--SDTAQAAIIRSLL 89
          REVD+LSERLS+LL +   D+ +AA+IRSLL
Sbjct: 61 REVDNLSERLSQLLESVDEDSPEAAVIRSLL 91

[Close]

BLAST of Tan0016260 vs. TAIR 10
Match: AT5G15160.1 (BANQUO 2 )

HSP 1 Score: 97.4 bits (241), Expect = 6.1e-21
Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 1  MSGRSRSRQ-SGPVRISDEQITDLVHKLQQLLPEIR-NRHSDKVSAAKVLQETCNYIRSL 60
          MS   RSRQ S   RISD+QITDL+ KL+Q +PEIR NR S+ VSA+KVLQETCNYIR+L
Sbjct: 1  MSSSRRSRQASSSSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNL 60

Query: 61 LREVDDLSERLSELLATSD--TAQAAIIRSLL 89
           +E DDLS+RL++LL + D  + QAA+IRSL+
Sbjct: 61 NKEADDLSDRLTQLLESIDPNSPQAAVIRSLI 92

The following BLAST results are available for this feature:

BLAST of Tan0016260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA64	5.0e-28	79.57	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
Q8GW32	1.2e-26	75.00	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
B8APB5	4.7e-26	76.40	Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV...	[more]
Q0DUR2	4.7e-26	76.40	Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 ...	[more]
A2Z730	3.3e-24	71.11	Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV...	[more]

BLAST of Tan0016260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573012.1	1.1e-35	96.67	putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma s...	[more]
XP_004152438.1	1.1e-35	96.67	transcription factor PRE3 [Cucumis sativus]	[more]
XP_022955105.1	1.1e-35	96.67	transcription factor PRE3-like [Cucurbita moschata]	[more]
XP_023542851.1	1.4e-35	95.56	transcription factor PRE3-like [Cucurbita pepo subsp. pepo]	[more]
XP_016899225.1	1.4e-35	96.67	PREDICTED: transcription factor PRE3-like [Cucumis melo] >XP_038895619.1 transcr...	[more]

BLAST of Tan0016260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQQ1	5.2e-36	96.67	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045430 PE=4 S...	[more]
A0A6J1GU92	5.2e-36	96.67	transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111457173 PE=...	[more]
A0A1S4DU40	6.7e-36	96.67	transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103482850 PE=4 SV=1	[more]
A0A6J1K5U5	4.4e-35	95.56	transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111490325 PE=4 ...	[more]
A0A5D3BJ22	1.1e-33	96.51	Transcription factor PRE3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Tan0016260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74500.1	3.5e-29	79.57	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT1G26945.1	8.7e-28	75.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G47710.1	3.4e-24	66.67	BANQUO 3	[more]
AT5G39860.1	6.1e-21	62.64	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G15160.1	6.1e-21	63.04	BANQUO 2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..82
None	No IPR available	PANTHER	PTHR46446:SF3	TRANSCRIPTION FACTOR PRE3	coord: 2..88
None	No IPR available	CDD	cd11442	bHLH_AtPRE_like	coord: 9..75 e-value: 3.91511E-19 score: 71.9507
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 17..86 e-value: 1.3E-8 score: 36.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 18..76
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 19..58 e-value: 4.1E-5 score: 23.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 4..58 score: 10.791374
IPR044293	Transcription factor PRE	PANTHER	PTHR46446	TRANSCRIPTION FACTOR PRE	coord: 2..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016260.1	Tan0016260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0040008	regulation of growth
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity