Tan0016248 (gene) Snake gourd v1

Overview


Name	Tan0016248
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG03: 60767074 .. 60769513 (+)
RNA-Seq Expression	Tan0016248
Synteny	Tan0016248

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATTCCGTACGCGTATGATACTGGGATTCAGTGACGACGACTTAGTTTTTATTAGAAAATATCCCAATTTACATAGTGAGTTTACCCAGTATGGAACTGGGTTTACTCTTAGTATGCAGACCGAGATTTTAGGCATTTTTTTTCAATTATTATTATTTTATTTCAATTTTTTTGTTGGTTATTTATTCCTTTGTAATATCTTGTTTATGAATTATGCAGGAATGGATATAGTCAATAAAATTTCATTCGAAGACCACTTTCCTACTACATTGACATGTTGTTATCATTTTGGTAGAACTAGTAAGAATATTAAGAGAAACCCCAACCCAATTAGAGTTATTTAAGCAAACATGTTTTGGCCCCTATTAGACACTTCTATTATTAAAAGCTTGAAAAAGGCTTTGAAGGGGAAAGTTGAGTCGTACAAGAAGAGACAAAATGTGATGAAGAAATCAGAGACGTATAGTCTATATGGATTTCCATACACATTTTAGGTTAGCTGAAACCAGAGTTTGAATTACATATCTACTTGATAACACCTTTGAATACTTTTAATATTTTTTAATTTAGGTATAGGCATATGAGACCATTTCATCATTGAGAGGGTGTGTTGCTAGTCGGTTAAATGACACGACCATTCTACATATTTGTAGATGGTCATGCGTGCACTTCTTCTTATTTATGATTGACCAGCGAGATCTTCGCATTCAGAGTGGTTAGTGACACTTTTTAATGTAGTTTTATTTGTTTGATTGTGGATTAACTTTTTTTTTTTTTTTTTTTTTTTGTTTGTTTAGGCGACTATCCAATCAGAGCTTATCTCATCTAAAGAAGAGGTTTGATTTATTAATCGAAGGATTGAGCCCCCACATGCAACACATGCAGCTCCTATCCCTGCTCCTGTTCCTGATTCTGCTTCTACCTCATTGTCTAAGTCTTCACACGGGTCGAAAGATAAAGATGAGAAGAAAGAACACGTGGAAGAGATTCAGAAAGAGACTAAGAGAGAGATTAAGAAGGAATGTGGCGAGGAAGGAAAAGCGAATGATCCCGAGAAAGAGGAGGAAGACAATGTAATTGTTCAAAAAAAGAAGAAGATCAAGTGCAAATGCAAAAAGTGGATGAAGAGTATGGACAATTAGATGTATAATATGGAGTTCAACCTAAAGGACATCAAGAGATTGTTGTGACAACTTGCTAATGTATTTTTTCTCTCCCAATCCATAATACCTTCGCATTTTAGTATAATAATGTGTATGATGCGATGTCAGGCGAAAGATGTCGACTCATCCAAGTATATTGGGTCAGAAAACGATGGGAATGATGATATTGGTCCATCTAAAGGTCAAGACAGTGACCCTCCTAAAAAGCCTAAGAACGATGATGTATCCAAAGAGCCTAAGGACGGTGGTCCTTCTAAATATAACATGGGTGGGGTAGATTTTGTTATGGACTCTGTCGAAAAGGCAAGTGAGTCAATGGATAAGCCTCGATCATGCATTCGTATGATGGATGGATATCATGTAAGATGATGGATACCATGAGACACCGATGAAGACCCATATGTAGATCATTACACGATAAGATTTAGGTAGGGGTGTACATAAGCCAGGTTGAGTTAGGTTGGAGGAGTTTTTTAGACTAATCCGAAAGGTTGGTCATTCCTTCAACCCAACCAATCCTATTCATAAGAGTAACTCAACCCAATATTTTCGGGTCGGGTTGGGTCGGGTCGCCAATTTATTTATTTTTTATAATTTTTTAATTATTTATAAAAAATCTTAAATTAATAACTAAAATTACATAAAATTCAAATATCAAACTTCAAAATTCATAACATCTTAACATTTGTTAGAAGCCTAGAAGAAAAATATCAAAAATTGACCAATAATTCATTTATAAGTATATATGTAATTAAAATAAAATAAAAAAATATATATAAACTTTGGATTGGGTAAATCCGAGCCTAAAAAGCCCAACTCGAAAATCGACCCGAACTTTTCAGTTCATCAAACTTCTAACCCAACTCAAATCAAAAAAAAAAAAAACCCAACCCAACCCTTACAATTTGGATTGGGTAGTCCAGGTTGCTCAGGTTATCAAGTTATCAAGTTATTTGTAAACTTCTAGTTTTAGGTATTGTTTTAAACTCAATGACTAGTTATGGGCTCTCAATCAACTTACAATTCACATTCTTTTCATTTGTAGATTAAAATACAAGTTTTAGGCTCTCAATCAACAATGGATACCACTAGTGATGTCAAACTCATCGAACCAAAACCCGAGGTAGTAAACTGTTTTAGTATTACTTGTAGGTTTACCTATTTTCTAATTTGTTGCAATCTTGTGTAACATACAGAGGCCGACTCAGATGTTGTTGAGGTGATAACGAAAATTAATGACGTTAAACCTCGTCGATCAAAGCACAAACGATGA

mRNA sequence

ATGATATTCCGTACGCGTATGATACTGGGATTCAGTGACGACGACTTAGTTTTTATTAGAAAATATCCCAATTTACATACTCCTATCCCTGCTCCTGTTCCTGATTCTGCTTCTACCTCATTGTCTAAGTCTTCACACGGGTCGAAAGATAAAGATGAGAAGAAAGAACACGTGGAAGAGATTCAGAAAGAGACTAAGAGAGAGATTAAGAAGGAATGTGGCGAGGAAGGAAAAGCGAATGATCCCGAGAAAGAGGAGGAAGACAATGCGAAAGATGTCGACTCATCCAAGTATATTGGGTCAGAAAACGATGGGAATGATGATATTGGTCCATCTAAAGGTCAAGACAGTGACCCTCCTAAAAAGCCTAAGAACGATGATGTATCCAAAGAGCCTAAGGACGGTGGTCCTTCTAAATATAACATGGGTGGGGTAGATTTTGTTATGGACTCTGTCGAAAAGGCAAGTGAGTCAATGGATAAGCCTCGATCATGCATTCGTATGATGGATGGATATCATATTAAAATACAAGTTTTAGGCTCTCAATCAACAATGGATACCACTAGTGATGTCAAACTCATCGAACCAAAACCCGAGGCCGACTCAGATGTTGTTGAGGTGATAACGAAAATTAATGACGTTAAACCTCGTCGATCAAAGCACAAACGATGA

Coding sequence (CDS)

ATGATATTCCGTACGCGTATGATACTGGGATTCAGTGACGACGACTTAGTTTTTATTAGAAAATATCCCAATTTACATACTCCTATCCCTGCTCCTGTTCCTGATTCTGCTTCTACCTCATTGTCTAAGTCTTCACACGGGTCGAAAGATAAAGATGAGAAGAAAGAACACGTGGAAGAGATTCAGAAAGAGACTAAGAGAGAGATTAAGAAGGAATGTGGCGAGGAAGGAAAAGCGAATGATCCCGAGAAAGAGGAGGAAGACAATGCGAAAGATGTCGACTCATCCAAGTATATTGGGTCAGAAAACGATGGGAATGATGATATTGGTCCATCTAAAGGTCAAGACAGTGACCCTCCTAAAAAGCCTAAGAACGATGATGTATCCAAAGAGCCTAAGGACGGTGGTCCTTCTAAATATAACATGGGTGGGGTAGATTTTGTTATGGACTCTGTCGAAAAGGCAAGTGAGTCAATGGATAAGCCTCGATCATGCATTCGTATGATGGATGGATATCATATTAAAATACAAGTTTTAGGCTCTCAATCAACAATGGATACCACTAGTGATGTCAAACTCATCGAACCAAAACCCGAGGCCGACTCAGATGTTGTTGAGGTGATAACGAAAATTAATGACGTTAAACCTCGTCGATCAAAGCACAAACGATGA

Protein sequence

MIFRTRMILGFSDDDLVFIRKYPNLHTPIPAPVPDSASTSLSKSSHGSKDKDEKKEHVEEIQKETKREIKKECGEEGKANDPEKEEEDNAKDVDSSKYIGSENDGNDDIGPSKGQDSDPPKKPKNDDVSKEPKDGGPSKYNMGGVDFVMDSVEKASESMDKPRSCIRMMDGYHIKIQVLGSQSTMDTTSDVKLIEPKPEADSDVVEVITKINDVKPRRSKHKR

Homology

The following BLAST results are available for this feature:

BLAST of Tan0016248 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0016248 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0016248 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0016248 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016248.1	Tan0016248.1	mRNA