Tan0016243 (gene) Snake gourd v1

Overview


Name	Tan0016243
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
Location	LG01: 4585370 .. 4593890 (-)
RNA-Seq Expression	Tan0016243
Synteny	Tan0016243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGATTGACTGCAGAAGCCTACGTGGTCGACCTTGATTGGAAAAACCATGTCATCGGAGAATTCATCCGAAAAAGTCTTGAAAGAGGAACCCTAACATCGAACCCATTTTGGTTCTGCATCAGCTCTCACTATTCCGCAAATTTTCGGGTTCGCTCATCGTCATCGACTTCCAATTGGATTCGCGCCGAGATCAAGCCGGCCATAGATAGCCATAGTCGTCGATCAATCAGGCAAGATTTCATATCGAAAAACAACTTTTCTGTTGATGTTTGTGGATTTGGTCGGTCATTTGGTTTTGTAACACCAAGATTACGGGTTTCTGGTTTGCCAAGTCTAGTCACATCATGTTGTAAAAACACTGCGTGACTCCGTCGATGAAGAACAAATGTCAGGGCTGGGAAAAATGGGAGGAAAATGCCTTGACCGGCTGATGTTGTCGAGTGTAGAGATGATATGGATGAACTCAACATAGATCATAGGAGATTAATTCACTTCTGTAAACCTTAGGAAGACTAATCCCAGTCGAATTTTCACGCGTTTACAGCGTAGATAAGATCAAACAACGTCTATTTTGTCTGATTTTCTAATGATCAGTGCTTTTGGCCTTTGAGTGGGAATTGGGACCTGGGATTTTTTTTGGCATTACGTAAATGGAGTTATAACCGGGTTGCCAAATTGGGTACTTATCTCATTCGTACAGCTTCCTATATTTTATAGTTCAAGTCAGGGAGCTTAGACCTAGCGGTTGGTTTGTCCTCCACTTTCCTTTTCATTGGCCATCTTTTGGCAAATTGAATGGCGTAGAAGAGATCTGAACATCTTTATTTATTAACTTCGTGTTGCCGAGTCAATTCCAATTATCTTTTTGGGGAATCCAAGGAAACCTTTAAAACATAATAAAATGGAATTTTTCCCTCTAGCTATGAGAATCTTCCATGTAGCATCGCATAAATAAGCACGCGATATGGGAGATGCAGAAGTCTAAAGTTCACGTATCTTCAAGCAACAAAGAATTACACGAAGAGTTATCAAATTTTGGTATTTAAGAATAAAACGGAGTTCCCTCTAGTTTTTAGACAAAGAAGTCCACGAGAAACCAGAACATGTACTTTCATATAGAAGATCTCCATCATTGAAAATTCCCCTATTTTTCCCCCAGTCAACCTGGAAAAGCTCAGATTGCTTGGACAAGGAAAATCCTTACCTTCATGAAAGTTTTTTTATGCATTACTTGTAGATTTAAATGTCTTCTATACTGATAATCAATATACTTTATTTTCAAGATAGGTGAAAATGATATTTTAGCATCGTTATTTTGTTTCATTTGGCTGACATTTCTAATTCTCACATGGCATTGCAGTAGAGAATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCATTGGTCTATTTATCGACTTCCAAGATCAATCTAGTGCTTCTTCTCAATATGGGTTTAGTCATCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGTATGGTTACGGCTTTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCATTGTTGTCTCACATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTTTACAATTCGATAGAATCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTAAGTTGTCAATTTCCACCGTATGGTATATATCTGCTTCTTTATTTGACAAGCTTAAACTATGATGTTTACATAACTGAAATTTATTGAACGTTTGGTACCATAAAAATTTCAAGGATATTTGTGGGTAAAATGTCGGATATACCTAGGCCATGCTAGATGAACTCATAAATTATTGTTTAAATTTGATATTTAGGATCTCATATGGAGAATTTGTGACTGAGAATACCATCTTTTAATCTACCGTCTTTTAGTCTTTGCTTGCTGGAGTAAAGTTTTTAAATATCCTATAATGTTTGCTTCTGGCCCTTTGAGGCTAGTATGTCATCATTAAATAAAATCAACGGCTTGCTTTTCAGGTATATGATTCTTGCGACAACGGCTGTGTCAACATTTGTGAAATATATTTTCTATGTGAGTGATGTACTCATGGAGGGACAATGGGAAAAGAAGCCTGTCTATACATTCTACTTGGAACTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGTAAGTAATCAAGCTACACCCCTTAAACCTATCTCATTCCTGTAAATTGGAAGTCCGAATTAATCTCTTTCGGCAAAGATGTGCTCATATTGCTTATGCCCAAATGTTAAAGTAGGAGGATACTGATTGATTCTTCTCAAACAATACTGTGCGAACTAAAATAATCAGATGTGGTAACTGGGATTTGTGCCCTTAATCAATGGCTGTCAGATTTTACTTTCATGTTAATCATGGAAGATGGCTCACAGTAGCGTCTTATGACCGACCTGATATTTGTTGACTTTTTGGATATCCTTTACATCCTTATTATTTTCAATCAGTTCTTATTTCTCTATAAGATTGAAAGAGGCGGAGCTTCCTGCATACTTGCACACATTGCCACTAAAAAAATGTTGATTTTGATTGTAGTCTGACCAATTATTTCTTGGAGGTTTTTGGATAAGAACTCTGTGGTCATGATTCCATTGCTAGACTGTAAACATCATAGAAAAGATTAGAATTCATTTCATTGACATGGTTCTGTTTTGGACTTTTAATTATCTTCTCTCTCCTTTCTACTATCTTCTCATGCCAACTGCTTAATGCATAGTAACGAGATAAGGAGGCCAAGTAAAGCTGCAAGTAAAGTGTATTGTACAAATTTCTTGCCTTCAATATGCTGGTATTTAATAGATGTTATAGTTTAAAATGCACAATTTTATAGCCTCCATTCTTTGATCTTCAGTGTATTGCTCTTTATTCTTTATTAACTTCATCCTCATTTCACATTTTGATTATGCTGAGCTTGCTCTTGTAGGACTTATGGCGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGACGCAACACCTGAAGAACTCAATTCGTGCGTCTGACCTTGGTCAAGTTATTATGTCTTCGATGCTTCCAATATTTATATTTCAGCTAATTAAATTCCTTTTATGGAATTGCAGAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCGCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCAGCAGGGATTGCAGTCCGATGCTAATCAACCAGGTAACAATTTAATTCAATTTACTGCTTGGCTAAAAAATCCTAGATCTTGTGCAATTTTTAATTTGATCCATGGATTGACCTAAACTTGAATAAGGGCTCAGGGCTTAGAGAGAATAGGTTCAAGTCATGGTGCCCATAGCAAATTTAATATCTTATGAATTTACTTGGCAACCGGATGTATTAGGGTTAGGTTGTTGTCTTATGAGATTAGTTGAAATGCTCACAAGCTGGTTTGGATGCTCAGGATATTAGAAAAAAAATCAATCTCTTCCATGTATATTTCATCTGGTTGTGGACTTTTTTGGAATCTTTCTTTTTCCTCAAAATTTTGACCTGGGAAGAAAAGCATGAAAGATCTGGAGGACATGATTCTTTTCAAAGTATCAAAAGCTGGAAAAGTACTCTTTGTTATTGCTTGTGTTACATTCAGAAACCTAGAGACAGGAGAATATCTGTTCCATCTGCCATGTCTCCTACAAATTAGTCCGTTCACAATTTTTCTAGTATTTTATTTGTGCAATGCTTCCCTGCATTTCCAATTCCTTTTACAAGTGGTGCTTTGTATGCAGAACCCAATTTTGCTTAATGTTTCAAAACTATTATATAATCTAGGTGATTAAGTAACGATGCAAAATGAGCTATCAGTATTTCTGAGTCTTCTCTATATGTAGTATATACCTCACCATCAGTGTGAAAGAGTTGAAATTTAGGTCTCTCAAAATTCATTTCGTGGGTGTTGACTTTCTCTCTCTTCTTTTTTTCTTATTTCTTTTGAATTTGTGTATTATATTCGTGCTTGTTTTTCTTAAGTGACCATCCTTAAAGCTATCAGATATTTTATATATTTTTGTGTCCGAGCAATTCAAACTCGTCCAAAGGAAGTTGTTTGATACTAGAAGCGTCTATGAACGTAAGCACATCTCTTTGAGAATGGATGATCATTCTTGAACTGGACCTCTGGTTCTCTGTAAAAATTGGGTGCTTCATTTTTTCTGTTCTTGTTTTGTTTTTAATTTTGTTATTGTCAGAAAAGGTGTAGGAGTATTTCCAAGTTTTCCATCGAAATTCTGAAAAGTCTTTCCTTTTACCTAAAAAATTGTTTGGAGTCTTTTACATGATCCCATTGCTTTGGATTAACAGCGTTAAATGTTTGGTTGTTTGGTGCATCTAGTAGCATTGTCTTCACTGTTCTTATTTCTTTGATTGAAGTTTTCGCTGCAAATCATAGAACTGCTGACTTCATTTAATTATTTTTTCAATTGGGTGGTACATCGGGCTGAAACTTGGATATAATTGACTCATCATTCTGTTGGAAACAGGAACAGGAGCCACAAATTCATCTGCACAAGGCTCGAGTGGTACAAGTGCTGCTGGTGATAACTTGAGTCATCATCAGGCTAGAGTCCAAGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAACACATTAGTATGGTATGGCTTTTTATTGTAAAATATGTGGTCCGTCTTATTCTCCTTTTTGTTGGTCTTGAAAATTTACTCCAATATTAAGGCCATTTCTCCCTTGTATATAACAACCCCTCACCCCAAACAGAGAGAGAAGAGTATAACATTTTTTTTAAAATTTCGTTTTATTTTATTTATTTCCAGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAGAGACCTTTGCCCGACTCCAACAATGTAGAACCGAATGGAGAACAAGCACAATATTTTCCATTTACAGGTGGCCCTGCAAACCTGACCTTCTCTCAAATTCCCCAAAATCTGTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGCAGCCAAGATATAACAGGTTCACAGCTTGAAGCTCAAGAAAGATTTCTTCAACAACAAATTGAGGTATGTTATTCAATTGTAGCATGAACATTACCTGGCGAACTGTCTTGGTTGGTTAATGTAGGTTCTGTTTGGGCTCTTGTTGCTGGGCCCTTGTATATTCTTTAGCTCAGTCCCCAGCCCAACCCCCCCCCCCCCAACCACCACCACCACCACCACACACACACAACCACAAAAAAAAAAAGCATGGCCCTGGCATTCGATTGACTGAAGTGCTGTTTGGTTTTCCCCTTTGTAATGTTTTCTCGACCTTTGATGTTCAACGGCCTTTTTTGCTTTTATATTTGTGATTTTTCCATTGGGGTGTAAAAAAATTTAGGCCCAACCAACCTGAACTACCAAAAACAATTAAAAAAAACTAGCCGTGGGTGATCAGGCGATTAGGACAATTAAGAAAGAAATTTGAAGTAAGCTCTCCAAAGAAAGGAATGAAAGGTGCCAAATCTCAAACACCTTCCGTTGAGACCTATTTATTATATCCAAGAAAATTTTCCTGTTTATTTCCAATCAAATATTTCTTAGTATAGCATAAAAGACCTACTTGCTTTAATAAATGGCCTTTATCTCGAAAGAGAAGAGGGTCCAAGAAAGCTTTTCCATCATTATGTGAATAGTCGAAGGAACCAATGAAATGCCAAAATTCAGCCAAAACCAACACCAGATCATAGATGATTAGGGGCAAAGCCATAAATGGTTTAAAATTTTTTAAGGCAGCTGTACACATCAATGAGGTCTTCAAGAGATTCTTTGGATAAATGCGAAGATGTTAATCCTCCCAAAAGCGACCACCCAAGAAAGGAATTAAATCTCTTTTTAGGATTTTCAACTTCCAAGTTTTTGGGAAAAGATGAGTGCAATACGGGGAGGGAGAAGAAATCAATCAATTATACAAGGACTTCTTGATGGAAACACCATAACGATGAAGATTACAACCAGTGATCGTTAGCCCAAAAATAAGTCTGACTCTTTGGATAGTAGAGATAAAGAGAGCTGGTTAATTGATTTCTCGATTGAAAAGGCTTTATAAAAGCGAAAATCAGTTAGAGTTCACGTCTAGTCAATGAACTAAGAACTTTGTAAGTTTTTGGTTAGGGATACGGAATACAAATGGGAAAATTGCAACCAGGGAGGTACTATTTTGAAGCCAAAGATCTTCCTAAAACCAAATTATGCAACAGTTCCTCACAAATATTTAACAGAGGATAGAAAGCAAAGGAAATCATTGGAGATCGCCTTGCATAGTTTCGTAAAGATGTTCGTAGAGCTTGGAGTAGACTCCCCAACTGTTGGAGTAAATCTCATACTTAGTTAATATTACCTCAGGACTTGTTCTAGGTGAAACAACCAAAATCATTTGGATGAAAGGGCGTGATATTTTTACAAACCAATTTTTATTAAAAAGATATATTTTTACAAACCAAGTTCCCAATCTCCAGTATGCCTTCCACACGTGATGTTGACACAGATTTCTAGTTAACTTAGTGCAACTCTCTCTCTTCATCCCCCACTAATACAAAATTTCTCAGGAACTCTTCCAACTTCTCCTTGATACTTAATAGCCCTTGAATATTGAACTGAAGCAAGAAGTTGTGCAGGATTTCCTTGAAAACTACCTAAATTTAAGTGAGTCTATTCTTTTGATGAAACCCGTGTGGATTAAGTTTAGAAAAGACTTTCGTCTTGAGGAAACCCTATTTTTCAGAGCCTTTGGAGATTTATCCTCCATAGACCGCTTGCTTACTACTCCTCAATGGCCTTTGGAAATCTTACTGAAATCCCTGAGGATTAAGTTCGAAAAAGAATTGTGTGATGGAGGAAGTGTATTTTTTGAAGCCCTTGGAGTGGATCTCTTACAATCTCTCCTTAATAGTCCATGGGAATTTCATGGAAAGCCATGTGGACCAAGTCCAAAAACAACTTTTGACTTGGAGGATAGTCTACTTTTCGAAGCCCTAGGAATACACGGGGAGTTTTATCCTCTGTGGATCTCTCATAACTTCTCGGTAGCCCTTGGATTTTATTTTATGAAAAATAATATTCCAAGGTGTGGTTTTCTTTCAAATTAAAAAAAAAAAAAAATCAAGGTGAGGCGATTCAAATAGAGGTTGAGAGGGGCTAGCTTGTGGTTTTGAAGGAAGGAATAAATATATAAACTTGTTTTTAGATTTTTGTTTGAGAAAGCGTAAAGTTCTTCTTCACACCGATTCCAAACAACTCTATATTTTGTCGATACTCGAAGGTAGAAAAAAGTGAAGGGTAGCCATAAGGTCAAATTATTAACAAGGAACATGTGATAAGTTAATGAGATGTCCTGTTAATAAATAAATTTATATTTATTCAACTTCATTCAAACTAATTTGGGTGAGGTTGAGGCCTGAGGGCTTTTATTTAGGAGAGTCCACCTTTTTGTTTGTATCAATAGCCATTTCCTTTTATATTCTAATTTTCATTTTTTGCCAACAGATACTACAAGATCAGCTGCAACTTCTCCGTAAACCGAAAGTTGAGGCAAGCTCGAGAGCAGGCGAGGCAGATAAGAAAGGGAAAAGCGTAGCATCATCATCACCATCATCGTCTTCATCAGTTTCAGATTCTCATCCACCCGGAGAAATTGATAGGGTGGTGAGATAGAAGAAATGTGCATAATTATAATGTGTAATAATACAAGACTGCAGAATCAGAATGACATAGATATCTCTTGTTCTTGTATACGGAAGATGTACTTGGTAAATTTTTAGAAGCTGTCTTCTTCCCATTTGCGTAGCCGTGTTGGTTGGTTTGATTGTAAATGCTGAATTTGGCGTCTCTTTTGAATCAATTATGCGACGGTCAAAAAAGAATATTGAAAGTTCTTTTCAGCAAAAGAAGAGAGTTTATTCAAAGATGTTTGGTTGCTATTTTCTTAGTCTAAAAGGTGCTTTTTGAAAA

mRNA sequence

GTTGGATTGACTGCAGAAGCCTACGTGGTCGACCTTGATTGGAAAAACCATGTCATCGGAGAATTCATCCGAAAAAGTCTTGAAAGAGGAACCCTAACATCGAACCCATTTTGGTTCTGCATCAGCTCTCACTATTCCGCAAATTTTCGGGTTCGCTCATCGTCATCGACTTCCAATTGGATTCGCGCCGAGATCAAGCCGGCCATAGATAGCCATAGTCGTCGATCAATCAGTAGAGAATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCATTGGTCTATTTATCGACTTCCAAGATCAATCTAGTGCTTCTTCTCAATATGGGTTTAGTCATCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGTATGGTTACGGCTTTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCATTGTTGTCTCACATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTTTACAATTCGATAGAATCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACGGCTGTGTCAACATTTGTGAAATATATTTTCTATGTGAGTGATGTACTCATGGAGGGACAATGGGAAAAGAAGCCTGTCTATACATTCTACTTGGAACTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACTTATGGCGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGACGCAACACCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCGCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCAGCAGGGATTGCAGTCCGATGCTAATCAACCAGGAACAGGAGCCACAAATTCATCTGCACAAGGCTCGAGTGGTACAAGTGCTGCTGGTGATAACTTGAGTCATCATCAGGCTAGAGTCCAAGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAACACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAGAGACCTTTGCCCGACTCCAACAATGTAGAACCGAATGGAGAACAAGCACAATATTTTCCATTTACAGGTGGCCCTGCAAACCTGACCTTCTCTCAAATTCCCCAAAATCTGTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGCAGCCAAGATATAACAGGTTCACAGCTTGAAGCTCAAGAAAGATTTCTTCAACAACAAATTGAGATACTACAAGATCAGCTGCAACTTCTCCGTAAACCGAAAGTTGAGGCAAGCTCGAGAGCAGGCGAGGCAGATAAGAAAGGGAAAAGCGTAGCATCATCATCACCATCATCGTCTTCATCAGTTTCAGATTCTCATCCACCCGGAGAAATTGATAGGGTGGTGAGATAGAAGAAATGTGCATAATTATAATGTGTAATAATACAAGACTGCAGAATCAGAATGACATAGATATCTCTTGTTCTTGTATACGGAAGATGTACTTGGTAAATTTTTAGAAGCTGTCTTCTTCCCATTTGCGTAGCCGTGTTGGTTGGTTTGATTGTAAATGCTGAATTTGGCGTCTCTTTTGAATCAATTATGCGACGGTCAAAAAAGAATATTGAAAGTTCTTTTCAGCAAAAGAAGAGAGTTTATTCAAAGATGTTTGGTTGCTATTTTCTTAGTCTAAAAGGTGCTTTTTGAAAA

Coding sequence (CDS)

ATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCATTGGTCTATTTATCGACTTCCAAGATCAATCTAGTGCTTCTTCTCAATATGGGTTTAGTCATCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATCACTATTTTCCGGCAAGATTTTTCTGTTGCATTCCTTGGTATGGTTACGGCTTTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCATTGTTGTCTCACATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTTTACAATTCGATAGAATCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACGGCTGTGTCAACATTTGTGAAATATATTTTCTATGTGAGTGATGTACTCATGGAGGGACAATGGGAAAAGAAGCCTGTCTATACATTCTACTTGGAACTTATCCGAGACTTACTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACTTATGGCGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGACGCAACACCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCGAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCGCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCAGCAGGGATTGCAGTCCGATGCTAATCAACCAGGAACAGGAGCCACAAATTCATCTGCACAAGGCTCGAGTGGTACAAGTGCTGCTGGTGATAACTTGAGTCATCATCAGGCTAGAGTCCAAGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGCGAACACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTCAGAGACCTTTGCCCGACTCCAACAATGTAGAACCGAATGGAGAACAAGCACAATATTTTCCATTTACAGGTGGCCCTGCAAACCTGACCTTCTCTCAAATTCCCCAAAATCTGTTTGTTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGCAGCCAAGATATAACAGGTTCACAGCTTGAAGCTCAAGAAAGATTTCTTCAACAACAAATTGAGATACTACAAGATCAGCTGCAACTTCTCCGTAAACCGAAAGTTGAGGCAAGCTCGAGAGCAGGCGAGGCAGATAAGAAAGGGAAAAGCGTAGCATCATCATCACCATCATCGTCTTCATCAGTTTCAGATTCTCATCCACCCGGAGAAATTGATAGGGTGGTGAGATAG

Protein sequence

MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGATNSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQRPLPDSNNVEPNGEQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGSSQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSSSVSDSHPPGEIDRVVR

Homology

[Close]

BLAST of Tan0016243 vs. ExPASy Swiss-Prot
Match: Q6NPT7 (ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=3702 GN=HRD1B PE=2 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 4.1e-173
Identity = 337/532 (63.35%), Postives = 398/532 (74.81%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGQQGLQSDANQPGTGA 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G +G   ++ Q GTG 
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TNSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYP-FANTLVWSPGYAVVPQV 420
           ++S  QGSS ++AA +N+S H+AR QAAA+AASIY +S VYP  ANTLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 420

Query: 421 QRPLPDSNNVEPNGEQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGSSQD 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 460

Query: 481 ITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSS 531
              +++EAQ RFL+ QIE+L +QL+LL KP           D KGKSVA ++
Sbjct: 481 ---TEVEAQRRFLESQIEVLTNQLRLLEKPTT--------VDTKGKSVADTA 460

[Close]

BLAST of Tan0016243 vs. ExPASy Swiss-Prot
Match: Q9LW77 (ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=3702 GN=HRD1A PE=2 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 1.3e-171
Identity = 336/531 (63.28%), Postives = 403/531 (75.89%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWEKKPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGQQGLQSDANQPGTGA 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE  +S A GQ+ L   + Q  + +
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSS 360

Query: 361 TNSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQ 420
            N  ++ SS    + ++LS H AR+QAAA+AAS+Y KS VYP ANT+ WS G     QV 
Sbjct: 361 GNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGVPGTEQV- 420

Query: 421 RPLPDSNNVEPNGEQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGSSQDI 480
                  + EP+                    +PQ+  +P +      N ++        
Sbjct: 421 -------STEPD------------------QTLPQH-NLPVENSHAYANMSE-------- 480

Query: 481 TGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSS 531
             ++LE   + L+  +EIL+++L  L   K E+   AGE + KGKSVA ++
Sbjct: 481 --TKLEEMRKSLETHLEILRNRLHFLETRKPES---AGEPENKGKSVADAA 491

[Close]

BLAST of Tan0016243 vs. ExPASy Swiss-Prot
Match: Q5Z880 (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HRD1 PE=2 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.7e-161
Identity = 311/507 (61.34%), Postives = 381/507 (75.15%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++LQTYA  S +AT   +Y+AF+SR QFYPA+VYLSTSKI  VLLLN GLV MC+ WQL
Sbjct: 1   MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K++FLG+LREAEVERLNEQ+W+E++EILFA+TIFRQDFSV+FL MV ALLL+KALHWLA
Sbjct: 61  VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSH RIVSF+ FL V+D LF  NS+ SLI  R+ASV++FFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILAT+ VSTFVKYIFYVSD+LMEGQWEKK VYTFYLELI DL+HLS+Y+ FF+ IF+ YG
Sbjct: 181 ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNFRIRIADY+RYRKITSNMN+RFPDAT +ELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQ-PGTGA 360
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRA ++PP+   TA    G+       PG G 
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGVQPVPGNGT 360

Query: 361 TNSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQ 420
             S         AAG+N+S  QA+++AAA+AAS+Y +S+ YP AN L     Y+  PQ  
Sbjct: 361 PGSE-------RAAGENISRRQAKLEAAASAASLYGRSFAYPPANNL---NRYSTPPQST 420

Query: 421 RPLPDSNNVEPNGEQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGSSQDI 480
              P S     + +  +    T  P+  TF               G V++   + +++++
Sbjct: 421 SNGPQSGEASTSNQSPKGHA-TADPSAPTFY------------ARGAVSS---VTTTREL 480

Query: 481 TGSQLEAQERFLQQQIEILQDQLQLLR 507
             S  +A E  ++ QIE+LQ QLQ+ +
Sbjct: 481 ESSLQKAYENAIKSQIEMLQIQLQMFQ 481

[Close]

BLAST of Tan0016243 vs. ExPASy Swiss-Prot
Match: Q803I8 (E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 4.2e-69
Identity = 141/331 (42.60%), Postives = 201/331 (60.73%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L +L
Sbjct: 1   MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            +K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           + RV++ME +P++  + H R++S +  L V+D LF  ++  S+I TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII-TRGASVQLVFGFEYA 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           IL T  ++TF+KY  +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 300
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPE+L ++D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMV 300

Query: 301 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 331
           T AKKL C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of Tan0016243 vs. ExPASy Swiss-Prot
Match: Q86TM6 (E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens OX=9606 GN=SYVN1 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-68
Identity = 141/331 (42.60%), Postives = 198/331 (59.82%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M +       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L ++
Sbjct: 1   MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
             K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           + RV++ME +P++  L H RIVS +  L +LD LF  ++  S++ TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           IL T  ++ F+KY+ +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 300
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPEEL + D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 300

Query: 301 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 331
           T AK+L C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of Tan0016243 vs. NCBI nr
Match: KAG6600225.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 983.4 bits (2541), Expect = 7.9e-283
Identity = 522/553 (94.39%), Postives = 532/553 (96.20%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG QGLQSDANQ GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SSAQGS GTSAAGD+LSHHQARVQAAAAAASIYEKSYVYPF NTL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNVEPNG-----EQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNNVEP G     EQAQYFPFTGGPANL+F+QIPQNLFVPFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
           SQ+I+GSQLE+QERFLQQQIEILQDQLQLLRK KVE SS AGEADKKGKS+ASSS SSSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGEIDR 549
           SVSDSHPPGE +R
Sbjct: 541 SVSDSHPPGETER 553

[Close]

BLAST of Tan0016243 vs. NCBI nr
Match: KAG7030884.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 982.2 bits (2538), Expect = 1.8e-282
Identity = 522/555 (94.05%), Postives = 532/555 (95.86%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG QGLQSDANQ GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SSAQGS GTSAAGD+LSHHQARVQAAAAAASIYEKSYVYPF NTL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLSHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNVEPNG-----EQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNNVEP G     EQAQYFPFTGGPANL+ +QIPQNLFVPFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSCTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
           SQ+I+GSQLE+QERFLQQQIEILQDQLQLLRK KVE SS AGEADKKGKS+ASSS SSSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGEIDRVV 551
           SVSDSHPPGE +R V
Sbjct: 541 SVSDSHPPGETERTV 555

[Close]

BLAST of Tan0016243 vs. NCBI nr
Match: XP_023531768.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo] >XP_023531774.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 978.0 bits (2527), Expect = 3.3e-281
Identity = 520/555 (93.69%), Postives = 529/555 (95.32%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG QG QSDANQ GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGSQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SSAQGS GT A GD+LSHHQARVQAAAAAASIYEKSYVYPFANTL WSPGYAVVPQVQR
Sbjct: 361 SSSAQGSGGTGAVGDSLSHHQARVQAAAAAASIYEKSYVYPFANTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNVEPNG-----EQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNNVEP G     EQAQYFPFT GPANL+F+QIPQNLFVPFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQASNEQAQYFPFTSGPANLSFTQIPQNLFVPFQPREGTVNNTDGLGS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
           SQ+ +GSQLEAQERFLQQQIEILQDQLQLLRK KVE SS AGEADKKGKS+ASSS SSSS
Sbjct: 481 SQNTSGSQLEAQERFLQQQIEILQDQLQLLRKLKVEDSSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGEIDRVV 551
           SVSDSHPPGE +R V
Sbjct: 541 SVSDSHPPGETERTV 555

[Close]

BLAST of Tan0016243 vs. NCBI nr
Match: XP_022942315.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_022942316.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata])

HSP 1 Score: 976.9 bits (2524), Expect = 7.4e-281
Identity = 518/555 (93.33%), Postives = 530/555 (95.50%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG QGLQSDAN  GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SSAQGS GTSAAGD+L HHQARVQAAAAAASIYEKSYVYPF NTL WSPGYAV+PQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR 420

Query: 421 PLPDSNNVEPNG-----EQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNNVEP G     EQAQYFPFTGGPANL+F+QIPQNLF+PFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
           SQ+I+GSQLE+QERFLQQQIEILQDQLQLLRK KVE SS AGEADKKGKS+ASSS SSSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGEIDRVV 551
           SVSDSHP GE +R V
Sbjct: 541 SVSDSHPHGETERTV 555

[Close]

BLAST of Tan0016243 vs. NCBI nr
Match: XP_023006862.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita maxima] >XP_023006934.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 976.5 bits (2523), Expect = 9.7e-281
Identity = 518/555 (93.33%), Postives = 529/555 (95.32%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG QGLQSDANQ GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SS QGS GTSAAGD+LSHHQ+RVQAAAAAASIYEKSYVYPF NTL WSPGYAVVPQVQR
Sbjct: 361 SSSEQGSGGTSAAGDSLSHHQSRVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNVEPNG-----EQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNNVEP G     EQAQYFPF GGPANL+++QIPQNLFVPFQPREGTVNNTDGL S
Sbjct: 421 PLLDSNNVEPIGEQAANEQAQYFPFAGGPANLSYTQIPQNLFVPFQPREGTVNNTDGLSS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
            Q+I+GSQLEAQERFLQQQIEILQDQLQLLRK KVE SS AGEADKKGKS+ASSS SSSS
Sbjct: 481 GQNISGSQLEAQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGEIDRVV 551
           SVSDSHPPGE +R V
Sbjct: 541 SVSDSHPPGETERTV 555

[Close]

BLAST of Tan0016243 vs. ExPASy TrEMBL
Match: A0A6J1FNJ3 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucurbita moschata OX=3662 GN=LOC111447399 PE=4 SV=1)

HSP 1 Score: 976.9 bits (2524), Expect = 3.6e-281
Identity = 518/555 (93.33%), Postives = 530/555 (95.50%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG QGLQSDAN  GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SSAQGS GTSAAGD+L HHQARVQAAAAAASIYEKSYVYPF NTL WSPGYAV+PQVQR
Sbjct: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVIPQVQR 420

Query: 421 PLPDSNNVEPNG-----EQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNNVEP G     EQAQYFPFTGGPANL+F+QIPQNLF+PFQPREGTVNNTDGLGS
Sbjct: 421 PLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPREGTVNNTDGLGS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
           SQ+I+GSQLE+QERFLQQQIEILQDQLQLLRK KVE SS AGEADKKGKS+ASSS SSSS
Sbjct: 481 SQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGEIDRVV 551
           SVSDSHP GE +R V
Sbjct: 541 SVSDSHPHGETERTV 555

[Close]

BLAST of Tan0016243 vs. ExPASy TrEMBL
Match: A0A6J1KWZ5 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499418 PE=4 SV=1)

HSP 1 Score: 976.5 bits (2523), Expect = 4.7e-281
Identity = 518/555 (93.33%), Postives = 529/555 (95.32%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG QGLQSDANQ GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SS QGS GTSAAGD+LSHHQ+RVQAAAAAASIYEKSYVYPF NTL WSPGYAVVPQVQR
Sbjct: 361 SSSEQGSGGTSAAGDSLSHHQSRVQAAAAAASIYEKSYVYPFGNTLAWSPGYAVVPQVQR 420

Query: 421 PLPDSNNVEPNG-----EQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNNVEP G     EQAQYFPF GGPANL+++QIPQNLFVPFQPREGTVNNTDGL S
Sbjct: 421 PLLDSNNVEPIGEQAANEQAQYFPFAGGPANLSYTQIPQNLFVPFQPREGTVNNTDGLSS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
            Q+I+GSQLEAQERFLQQQIEILQDQLQLLRK KVE SS AGEADKKGKS+ASSS SSSS
Sbjct: 481 GQNISGSQLEAQERFLQQQIEILQDQLQLLRKLKVEESSIAGEADKKGKSIASSSQSSSS 540

Query: 541 SVSDSHPPGEIDRVV 551
           SVSDSHPPGE +R V
Sbjct: 541 SVSDSHPPGETERTV 555

[Close]

BLAST of Tan0016243 vs. ExPASy TrEMBL
Match: A0A6J1CJF5 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011717 PE=4 SV=1)

HSP 1 Score: 962.6 bits (2487), Expect = 7.0e-277
Identity = 511/557 (91.74%), Postives = 528/557 (94.79%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLFFYNSIE LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG  G   DANQ GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHG-SHDANQQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SSAQ SSGT  AGDNLSHHQARVQAAAAAASIYEKSYVYP A+TLVWSPGYAVVPQ QR
Sbjct: 361 SSSAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQR 420

Query: 421 PLPDSNNVEPNGEQA-----QYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNN+EPNGEQA     QYFPFTGGPANL+F+Q PQNLFVPFQPREG+VNNTDGLGS
Sbjct: 421 PLADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
           SQ+++G  LE QERF+QQQIE+LQ QLQLLR PKVE S+RAGEADKKGKSVASS PSSSS
Sbjct: 481 SQNVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTRAGEADKKGKSVASSPPSSSS 540

Query: 541 SVSDSHPP-GEIDRVVR 552
           SVS+SHPP GEI+R+VR
Sbjct: 541 SVSESHPPAGEIERMVR 556

[Close]

BLAST of Tan0016243 vs. ExPASy TrEMBL
Match: A0A6J1CI55 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011717 PE=4 SV=1)

HSP 1 Score: 956.4 bits (2471), Expect = 5.0e-275
Identity = 510/557 (91.56%), Postives = 527/557 (94.61%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFL FLF+LDSLFFYNSIE LI+TRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLSFLFILDSLFFYNSIEYLIRTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG  G   DANQ GT  T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHHG-SHDANQQGT--T 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SSAQ SSGT  AGDNLSHHQARVQAAAAAASIYEKSYVYP A+TLVWSPGYAVVPQ QR
Sbjct: 361 SSSAQDSSGTGVAGDNLSHHQARVQAAAAAASIYEKSYVYPCASTLVWSPGYAVVPQTQR 420

Query: 421 PLPDSNNVEPNGEQA-----QYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNN+EPNGEQA     QYFPFTGGPANL+F+Q PQNLFVPFQPREG+VNNTDGLGS
Sbjct: 421 PLADSNNIEPNGEQAPNGQPQYFPFTGGPANLSFTQFPQNLFVPFQPREGSVNNTDGLGS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSSPSSSS 540
           SQ+++G  LE QERF+QQQIE+LQ QLQLLR PKVE S+RAGEADKKGKSVASS PSSSS
Sbjct: 481 SQNVSGLHLEDQERFIQQQIEMLQKQLQLLRNPKVEESTRAGEADKKGKSVASSPPSSSS 540

Query: 541 SVSDSHPP-GEIDRVVR 552
           SVS+SHPP GEI+R+VR
Sbjct: 541 SVSESHPPAGEIERMVR 554

[Close]

BLAST of Tan0016243 vs. ExPASy TrEMBL
Match: A0A1S4E231 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucumis melo OX=3656 GN=LOC103495570 PE=4 SV=1)

HSP 1 Score: 931.0 bits (2405), Expect = 2.3e-267
Identity = 497/558 (89.07%), Postives = 520/558 (93.19%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGQQGLQSDANQPGTGAT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST  G  G+QSDANQ GTG T
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQQGTGTT 360

Query: 361 NSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQR 420
           +SSAQG+SGT     NLSHHQARV+AAAAAASIYEKSYVYP A+TLVWS GYAVVPQV+R
Sbjct: 361 SSSAQGTSGTGVTNANLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVER 420

Query: 421 PLPDSNNVEPNGEQA-----QYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGS 480
           PL DSNN E NGEQ+     QYF F GGP+NL+F+Q PQN+FVPFQPREGT NN + LGS
Sbjct: 421 PLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGS 480

Query: 481 SQDITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSR-AGEADKKGKSVA-SSSPSS 540
           S +++GSQLEAQE+FLQQQIE LQ+QLQLLRKPKVE SSR A E DKKGKS+A S SPS+
Sbjct: 481 SLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASETDKKGKSLAISPSPSA 540

Query: 541 SSSVSDSHPPGEIDRVVR 552
           S S SDSHPPGE +RVVR
Sbjct: 541 SLSSSDSHPPGETERVVR 558

[Close]

BLAST of Tan0016243 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 609.4 bits (1570), Expect = 2.9e-174
Identity = 337/532 (63.35%), Postives = 398/532 (74.81%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGQQGLQSDANQPGTGA 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G +G   ++ Q GTG 
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TNSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYP-FANTLVWSPGYAVVPQV 420
           ++S  QGSS ++AA +N+S H+AR QAAA+AASIY +S VYP  ANTLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 420

Query: 421 QRPLPDSNNVEPNGEQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGSSQD 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 460

Query: 481 ITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSS 531
              +++EAQ RFL+ QIE+L +QL+LL KP           D KGKSVA ++
Sbjct: 481 ---TEVEAQRRFLESQIEVLTNQLRLLEKPTT--------VDTKGKSVADTA 460

[Close]

BLAST of Tan0016243 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 604.4 bits (1557), Expect = 9.3e-173
Identity = 336/531 (63.28%), Postives = 403/531 (75.89%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWEKKPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGQQGLQSDANQPGTGA 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE  +S A GQ+ L   + Q  + +
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQGTSSS 360

Query: 361 TNSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYPFANTLVWSPGYAVVPQVQ 420
            N  ++ SS    + ++LS H AR+QAAA+AAS+Y KS VYP ANT+ WS G     QV 
Sbjct: 361 GNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGVPGTEQV- 420

Query: 421 RPLPDSNNVEPNGEQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGSSQDI 480
                  + EP+                    +PQ+  +P +      N ++        
Sbjct: 421 -------STEPD------------------QTLPQH-NLPVENSHAYANMSE-------- 480

Query: 481 TGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSS 531
             ++LE   + L+  +EIL+++L  L   K E+   AGE + KGKSVA ++
Sbjct: 481 --TKLEEMRKSLETHLEILRNRLHFLETRKPES---AGEPENKGKSVADAA 491

[Close]

BLAST of Tan0016243 vs. TAIR 10
Match: AT1G65040.3 (RING/U-box superfamily protein )

HSP 1 Score: 477.2 bits (1227), Expect = 1.7e-134
Identity = 282/532 (53.01%), Postives = 336/532 (63.16%), Query Frame = 0


Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINL                 
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINL----------------- 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120
                                                                  LHW+A
Sbjct: 61  ------------------------------------------------------GLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGQQGLQSDANQPGTGA 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G +G   ++ Q GTG 
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TNSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYP-FANTLVWSPGYAVVPQV 420
           ++S  QGSS ++AA +N+S H+AR QAAA+AASIY +S VYP  ANTLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ- 389

Query: 421 QRPLPDSNNVEPNGEQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGSSQD 480
                                                                       
Sbjct: 421 ------------------------------------------------------------ 389

Query: 481 ITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSS 531
              +++EAQ RFL+ QIE+L +QL+LL KP           D KGKSVA ++
Sbjct: 481 ---TEVEAQRRFLESQIEVLTNQLRLLEKPTT--------VDTKGKSVADTA 389

[Close]

BLAST of Tan0016243 vs. TAIR 10
Match: AT1G65040.1 (RING/U-box superfamily protein )

HSP 1 Score: 353.2 bits (905), Expect = 3.8e-97
Identity = 203/353 (57.51%), Postives = 239/353 (67.71%), Query Frame = 0


Query: 180 MILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTY 239
           MILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM Y
Sbjct: 1   MILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNY 60

Query: 240 GVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM 299
           G+PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEM
Sbjct: 61  GLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEM 120

Query: 300 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGQQGLQSDANQPGTG 359
           T AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G +G   ++ Q GTG
Sbjct: 121 TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTG 180

Query: 360 ATNSSAQGSSGTSAAGDNLSHHQARVQAAAAAASIYEKSYVYP-FANTLVWSPGYAVVPQ 419
            ++S  QGSS ++AA +N+S H+AR QAAA+AASIY +S VYP  ANTLVWS G +++PQ
Sbjct: 181 TSSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQ 240

Query: 420 VQRPLPDSNNVEPNGEQAQYFPFTGGPANLTFSQIPQNLFVPFQPREGTVNNTDGLGSSQ 479
                                                                       
Sbjct: 241 ------------------------------------------------------------ 281

Query: 480 DITGSQLEAQERFLQQQIEILQDQLQLLRKPKVEASSRAGEADKKGKSVASSS 531
               +++EAQ RFL+ QIE+L +QL+LL KP           D KGKSVA ++
Sbjct: 301 ----TEVEAQRRFLESQIEVLTNQLRLLEKPTT--------VDTKGKSVADTA 281

[Close]

BLAST of Tan0016243 vs. TAIR 10
Match: AT4G25230.1 (RPM1 interacting protein 2 )

HSP 1 Score: 94.7 bits (234), Expect = 2.4e-19
Identity = 97/343 (28.28%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 25  SRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKE 84
           S G    AL  L  S   + LL N  L +  +L    K +F G L + E ++L E+    
Sbjct: 42  SLGDSEHALELLLGSYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANY 101

Query: 85  L------MEILFAITIFRQDFSVAFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 144
           +      + ++   TIF+    V +   +T L  +K    LA+ R+E +  +PS    ++
Sbjct: 102 IIYKGTFLPLVIPPTIFQ---GVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTY 161

Query: 145 IRIVSFLGFLFVLD------SLFFYNSIESLIQTRKASVSLFFSFE----YMILATTAVS 204
            R+ S L  +  +D      SL  YN+I S +           +FE     +I     + 
Sbjct: 162 FRVYSVLFLVLSVDMFWIKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLD 221

Query: 205 TFVKYIF----------YVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMT 264
            ++ ++           ++  +      E K +    L    D+  L M L  +L I+  
Sbjct: 222 MWINHLAVKNSDCQRSKFIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWL 281

Query: 265 YGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEELNSSDAT 324
           +G+  HL+  +  +F N R        RI  YI+ R     ++   PDAT EEL + D  
Sbjct: 282 HGIAFHLVDAV--LFLNIRALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDE 341

Query: 325 CIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCR 331
           C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR
Sbjct: 342 CAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379

The following BLAST results are available for this feature:

BLAST of Tan0016243 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPT7	4.1e-173	63.35	ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=370...	[more]
Q9LW77	1.3e-171	63.28	ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=370...	[more]
Q5Z880	2.7e-161	61.34	ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica...	[more]
Q803I8	4.2e-69	42.60	E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2	[more]
Q86TM6	2.1e-68	42.60	E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens OX=9606 GN=SYVN1 PE=1 SV=...	[more]

BLAST of Tan0016243 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600225.1	7.9e-283	94.39	ERAD-associated E3 ubiquitin-protein ligase HRD1A, partial [Cucurbita argyrosper...	[more]
KAG7030884.1	1.8e-282	94.05	ERAD-associated E3 ubiquitin-protein ligase HRD1A [Cucurbita argyrosperma subsp....	[more]
XP_023531768.1	3.3e-281	93.69	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pe...	[more]
XP_022942315.1	7.4e-281	93.33	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_...	[more]
XP_023006862.1	9.7e-281	93.33	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 [Cucurbita max...	[more]

BLAST of Tan0016243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNJ3	3.6e-281	93.33	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucurbita moschata OX=...	[more]
A0A6J1KWZ5	4.7e-281	93.33	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Cucurbita m...	[more]
A0A6J1CJF5	7.0e-277	91.74	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 OS=Momordica c...	[more]
A0A6J1CI55	5.0e-275	91.56	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X2 OS=Momordica c...	[more]
A0A1S4E231	2.3e-267	89.07	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucumis melo OX=3656 G...	[more]

BLAST of Tan0016243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65040.2	2.9e-174	63.35	RING/U-box superfamily protein	[more]
AT3G16090.1	9.3e-173	63.28	RING/U-box superfamily protein	[more]
AT1G65040.3	1.7e-134	53.01	RING/U-box superfamily protein	[more]
AT1G65040.1	3.8e-97	57.51	RING/U-box superfamily protein	[more]
AT4G25230.1	2.4e-19	28.28	RPM1 interacting protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 481..501
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 508..551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 525..541
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..378
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 1..469
None	No IPR available	PANTHER	PTHR22765:SF230	ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE HRD1B-LIKE	coord: 1..469
None	No IPR available	CDD	cd16479	RING-H2_synoviolin	coord: 289..330 e-value: 7.83129E-28 score: 103.532
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 272..336
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 292..329 e-value: 2.0E-5 score: 34.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 291..330 e-value: 1.2E-10 score: 41.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 292..330 score: 12.415513
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 264..336 e-value: 5.3E-23 score: 82.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016243.1	Tan0016243.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity