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Tan0016184 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGATCAGCGAGGCAAAGCCTCATCTTCAAAGGGCAAAAGCCCAACCTCTTCTTCAAACATTCCAGCTCCCATGAGCGCCGATCAATACGCAATGGATCTGGGTTTCACTCAGGTGAATCGCCCAAGAACCAGAAGCGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCACCACCGAGGCCATCGGCCTCCTCATGCGCGACCTCTTTGCCGTTACACCAATGAGACCTTCCGTCTCACCTACTACTCCATCTTCGTCTCAACAGGGATCTTCAATCCCTACAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTAAACCTGAAATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAATTCGATGGTATTTCAATTGTTGAAATCATTCAAAATATGTATCCTCAAGGATTCTATTTCCTACCGGAATCCTTGATAAAAACAAGGAAATATTATGAATTCATCCTTGTAGATTCAAAATCTGTCCAGATAACTCATATCCCGGACAGAAATGATCCTTCAAAAATTGCCTACTCAAAACTCAAAATTTTTAAAGTTTTAAACCCTACCAATTGGAATCAAAATATATTCACAGAAAGAACACTTTCAAAACCATTCAATCCCGGACTTACAAATGCATAGAGATTATGTTGAAGCTTGGTACAAAGTAATGTGGTACAAAAATTATGAGCATTCTTGGTTTATTCAATTCTGTCAAAATGCTTACAAAATAGATTATCCATTCTGGTTTATCAAATGGTGGAAGACTTTCTACTATCGGAGGAAATCTTCCCAGTTCCTATTCAAGAATCATTCCATTACTTTTCACAAACAATACACAAAAATGCATTCCCACTCACAATGCGTTTTTGTTTATACTTTCAAACCCCTTGGATATTCTGTTGGAATTTCCAAATCAATACTTACAACTATTACAAACAAATTGTAAAAGTTTTACAAATCAAATGGTGGGACAAGTACAACTTTTCTCACGCAGGAATCAAAGAAGTGAAGCAATGGTTTGCCGATAATGGCTACCTCCAAGACCTGTCAAAGAAGAAAAATGCAGAGTTCCTCAATTCAAAATCAAAGCTGCTAGCTGCCTTAGCACAAACAACAACAGAGGCAGATTTACAAAAAATCTTGAATCAAGTTACTTCAATAGCATCTTCGTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAATGATCCGTTTTTAGATTCCCAACCAATGTAG ATGAGTGATCAGCGAGGCAAAGCCTCATCTTCAAAGGGCAAAAGCCCAACCTCTTCTTCAAACATTCCAGCTCCCATGAGCGCCGATCAATACGCAATGGATCTGGGTTTCACTCAGGCCATCGGCCTCCTCATGCGCGACCTCTTTGCCGTTACACCAATGAGACCTTCCGTCTCACCTACTACTCCATCTTCGTCTCAACAGGGATCTTCAATCCCTACAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTAAACCTGAAATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAATTCGATGAGTTCCTCAATTCAAAATCAAAGCTGCTAGCTGCCTTAGCACAAACAACAACAGAGGCAGATTTACAAAAAATCTTGAATCAAGTTACTTCAATAGCATCTTCGTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAATGATCCGTTTTTAGATTCCCAACCAATGTAG ATGAGTGATCAGCGAGGCAAAGCCTCATCTTCAAAGGGCAAAAGCCCAACCTCTTCTTCAAACATTCCAGCTCCCATGAGCGCCGATCAATACGCAATGGATCTGGGTTTCACTCAGGCCATCGGCCTCCTCATGCGCGACCTCTTTGCCGTTACACCAATGAGACCTTCCGTCTCACCTACTACTCCATCTTCGTCTCAACAGGGATCTTCAATCCCTACAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTAAACCTGAAATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAATTCGATGAGTTCCTCAATTCAAAATCAAAGCTGCTAGCTGCCTTAGCACAAACAACAACAGAGGCAGATTTACAAAAAATCTTGAATCAAGTTACTTCAATAGCATCTTCGTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAATGATCCGTTTTTAGATTCCCAACCAATGTAG MSDQRGKASSSKGKSPTSSSNIPAPMSADQYAMDLGFTQAIGLLMRDLFAVTPMRPSVSPTTPSSSQQGSSIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKLLAALAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQPM Homology
BLAST of Tan0016184 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]) HSP 1 Score: 141.0 bits (354), Expect = 9.9e-30 Identity = 94/219 (42.92%), Postives = 134/219 (61.19%), Query Frame = 0
BLAST of Tan0016184 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.6 bits (244), Expect = 5.6e-17 Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 0
BLAST of Tan0016184 vs. NCBI nr
Match: KAA0066384.1 (hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK00900.1 hypothetical protein E5676_scaffold602G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 1.3e-16 Identity = 75/201 (37.31%), Postives = 106/201 (52.74%), Query Frame = 0
BLAST of Tan0016184 vs. NCBI nr
Match: KAA0053156.1 (hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 8.1e-16 Identity = 73/201 (36.32%), Postives = 100/201 (49.75%), Query Frame = 0
BLAST of Tan0016184 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 5.3e-15 Identity = 73/193 (37.82%), Postives = 99/193 (51.30%), Query Frame = 0
BLAST of Tan0016184 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 4.8e-30 Identity = 94/219 (42.92%), Postives = 134/219 (61.19%), Query Frame = 0
BLAST of Tan0016184 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 2.7e-17 Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 0
BLAST of Tan0016184 vs. ExPASy TrEMBL
Match: A0A5D3BPD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00610 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 6.1e-17 Identity = 75/201 (37.31%), Postives = 106/201 (52.74%), Query Frame = 0
BLAST of Tan0016184 vs. ExPASy TrEMBL
Match: A0A5A7UFZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1248G00100 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 3.9e-16 Identity = 73/201 (36.32%), Postives = 100/201 (49.75%), Query Frame = 0
BLAST of Tan0016184 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.5e-15 Identity = 73/193 (37.82%), Postives = 99/193 (51.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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