Tan0016181 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGGGAGAGATCTCTTTGTTCCTTGTATCCCCATTTATATCATTTGTCCTCCTTAAAAAATCACTTGGTAGCTTCGATGATCTCTAGTCCTTCCTATTCTAATTTTGTCACTCCATCTCCTTCCCTTGGATTTAGTCGGGCTTTGACCAATAGGGAAACACCCGAAGTTATATCTTTGTTGTCTCTGATCAGTCAGCTTCGACTCTACCATCATCCGAGGGATTCCCGGCTTTGGACTCTCTCTCCTTCTAAAGGTTTTTCGTGTAGCTCCTTCTTTCACTGTTTGGTGAGTCCTGTTGCGTTGAATGATTCTTTTTTCTCCTCTATGTGGAAGGTGAAGGTTCCAAAGAAGGTGAAGTTTTTTGTTTCGCAGGTTTGACATGGAAGGGTGAACACTTTGGATCGTTTGTTGGCTAGGGGGTCTCCTTTGGTTGGGATGTTCTGTTGTATTCTTTGCAGGAGGGCAAACGAGGATCTGGATTACATGCTTTGGAGACGTGACTTTGCTCGAGCTATTTGGAATTGCTTTTTTCAGCAATTCAACTTCTGTTTTGTTGGTCACTTCGATAGTAGAGAGACGTTCATGGAGCTTCTTCTCAATTTGTCTTTCCATGAGAAAGGATTGTTTTCGTGGCAGGGTGAGGTTTGTGCTATTCTATGGTATTTGTGGCTGGAGAGAAACAATAGAATCTTTAGGGGAAAAAAGACTTCTCCTTTGGAAGTGTGGTCCCTAATTAGATTCTATGTTTCTTTTTGGGCTTCGGTGTTAAGGTTCTTTTGTAATTATTCTTTAAGTCTTATTTTGCTTGATTGGAGCCATTTTTTTAGTTGACTCCCCTTTTTTTTGTGGGCTTCTCTTTTTTTTTTTGTACACCCGCGTATTCTTTCATTTTTATCTCAATGAAAGTTCGGTATTTCATGAAAAAAAAAAGCTACAATAAATCTCGAATTAATATCAACTTGGGCCTTAACATCTAAATTCTCAACGACTGATGTCTTCGAAGGTAAAATAAAGTCCTTAGAAATTCCTTCTTCATGCAAGGCCTCATTAATTAATGCCTCTCTCTTGCATATCTTCTAACTCAATATTAACGGTACTAGAATTAATGTTCCGTTGGACATTAAATTCTAATTCCTCAACAATCGTGTGTTTGTGAGCGAAGTCTGAGTGCAGAATTAATTCCTTTCTCATGCATGGGCTTCAATATTAATGCCTCCTTTTCACCCCTGAAACTTCTTTCCCCTTTTAAACCACAGAGCTGTTCACACTTGATTTTCTAC GTGGGGGAGAGATCTCTTTGTTCCTTGTATCCCCATTTATATCATTTGTCCTCCTTAAAAAATCACTTGGTAGCTTCGATGATCTCTAGTCCTTCCTATTCTAATTTTGTCACTCCATCTCCTTCCCTTGGATTTAGTCGGGCTTTGACCAATAGGGAAACACCCGAAGTTATATCTTTGTTGTCTCTGATCAGTCAGCTTCGACTCTACCATCATCCGAGGGATTCCCGGCTTTGGACTCTCTCTCCTTCTAAAGGTTTTTCGTGTAGCTCCTTCTTTCACTGTTTGGTGAGTCCTGTTGCGTTGAATGATTCTTTTTTCTCCTCTATGTGGAAGGTGAAGGTTCCAAAGAAGGTGAAGTTTTTTGTTTCGCAGGTTTGACATGGAAGGGTGAACACTTTGGATCGTTTGTTGGCTAGGGGGTCTCCTTTGGTTGGGATGTTCTGTTGTATTCTTTGCAGGAGGGCAAACGAGGATCTGGATTACATGCTTTGGAGACGTGACTTTGCTCGAGCTATTTGGAATTGCTTTTTTCAGCAATTCAACTTCTGTTTTGTTGGTCACTTCGATAGTAGAGAGACGTTCATGGAGCTTCTTCTCAATTTGTCTTTCCATGAGAAAGGATTGTTTTCGTGGCAGGGTGAGGTTTGTGCTATTCTATGGTATTTGTGGCTGGAGAGAAACAATAGAATCTTTAGGGGAAAAAAGACTTCTCCTTTGGAAGTGTGGTCCCTAATTAGATTCTATGTTTCTTTTTGGGCTTCGGTGTTAAGGTTCTTTTGTAATTATTCTTTAAGTCTTATTTTGCTTGATTGGAGCCATTTTTTTAGTTGACTCCCCTTTTTTTTGTGGGCTTCTCTTTTTTTTTTTGTACACCCGCGTATTCTTTCATTTTTATCTCAATGAAAGTTCGGTATTTCATGAAAAAAAAAAGCTACAATAAATCTCGAATTAATATCAACTTGGGCCTTAACATCTAAATTCTCAACGACTGATGTCTTCGAAGGTAAAATAAAGTCCTTAGAAATTCCTTCTTCATGCAAGGCCTCATTAATTAATGCCTCTCTCTTGCATATCTTCTAACTCAATATTAACGGTACTAGAATTAATGTTCCGTTGGACATTAAATTCTAATTCCTCAACAATCGTGTGTTTGTGAGCGAAGTCTGAGTGCAGAATTAATTCCTTTCTCATGCATGGGCTTCAATATTAATGCCTCCTTTTCACCCCTGAAACTTCTTTCCCCTTTTAAACCACAGAGCTGTTCACACTTGATTTTCTAC ATGTTCTGTTGTATTCTTTGCAGGAGGGCAAACGAGGATCTGGATTACATGCTTTGGAGACGTGACTTTGCTCGAGCTATTTGGAATTGCTTTTTTCAGCAATTCAACTTCTGTTTTGTTGGTCACTTCGATAGTAGAGAGACGTTCATGGAGCTTCTTCTCAATTTGTCTTTCCATGAGAAAGGATTGTTTTCGTGGCAGGGTGAGGTTTGTGCTATTCTATGGTATTTGTGGCTGGAGAGAAACAATAGAATCTTTAGGGGAAAAAAGACTTCTCCTTTGGAAGTGTGGTCCCTAATTAGATTCTATGTTTCTTTTTGGGCTTCGGTGTTAAGGTTCTTTTGTAATTATTCTTTAAGTCTTATTTTGCTTGATTGGAGCCATTTTTTTAGTTGA MFCCILCRRANEDLDYMLWRRDFARAIWNCFFQQFNFCFVGHFDSRETFMELLLNLSFHEKGLFSWQGEVCAILWYLWLERNNRIFRGKKTSPLEVWSLIRFYVSFWASVLRFFCNYSLSLILLDWSHFFS Homology
BLAST of Tan0016181 vs. NCBI nr
Match: XP_016900613.1 (PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]) HSP 1 Score: 113.2 bits (282), Expect = 1.7e-21 Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Tan0016181 vs. NCBI nr
Match: TYK19563.1 (uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 4.0e-15 Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Tan0016181 vs. NCBI nr
Match: RVW41830.1 (hypothetical protein CK203_108403 [Vitis vinifera]) HSP 1 Score: 77.8 bits (190), Expect = 7.8e-11 Identity = 39/123 (31.71%), Postives = 57/123 (46.34%), Query Frame = 0
BLAST of Tan0016181 vs. NCBI nr
Match: XP_040371876.1 (uncharacterized protein LOC112192237 isoform X1 [Rosa chinensis] >XP_040371877.1 uncharacterized protein LOC112192237 isoform X1 [Rosa chinensis] >XP_040371878.1 uncharacterized protein LOC112192237 isoform X1 [Rosa chinensis] >XP_040371879.1 uncharacterized protein LOC112192237 isoform X1 [Rosa chinensis] >XP_040371880.1 uncharacterized protein LOC112192237 isoform X1 [Rosa chinensis] >XP_040371881.1 uncharacterized protein LOC112192237 isoform X1 [Rosa chinensis]) HSP 1 Score: 77.8 bits (190), Expect = 7.8e-11 Identity = 41/124 (33.06%), Postives = 60/124 (48.39%), Query Frame = 0
BLAST of Tan0016181 vs. NCBI nr
Match: XP_040371882.1 (uncharacterized protein LOC112192237 isoform X2 [Rosa chinensis]) HSP 1 Score: 77.8 bits (190), Expect = 7.8e-11 Identity = 41/124 (33.06%), Postives = 60/124 (48.39%), Query Frame = 0
BLAST of Tan0016181 vs. ExPASy TrEMBL
Match: A0A1S4DXB1 (uncharacterized protein LOC107990976 OS=Cucumis melo OX=3656 GN=LOC107990976 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 8.1e-22 Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Tan0016181 vs. ExPASy TrEMBL
Match: A0A5D3D7T2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00660 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.9e-15 Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Tan0016181 vs. ExPASy TrEMBL
Match: A0A438E2J1 (zf-RVT domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_108403 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.8e-11 Identity = 39/123 (31.71%), Postives = 57/123 (46.34%), Query Frame = 0
BLAST of Tan0016181 vs. ExPASy TrEMBL
Match: A0A438FM03 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_354 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.8e-11 Identity = 39/123 (31.71%), Postives = 57/123 (46.34%), Query Frame = 0
BLAST of Tan0016181 vs. ExPASy TrEMBL
Match: A0A438KG54 (Protein RETICULATA, chloroplastic OS=Vitis vinifera OX=29760 GN=RE_0 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10 Identity = 38/123 (30.89%), Postives = 56/123 (45.53%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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