Tan0016141 (gene) Snake gourd v1

Overview


Name	Tan0016141
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Vesicle transport protein
Location	LG01: 1151995 .. 1156099 (+)
RNA-Seq Expression	Tan0016141
Synteny	Tan0016141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAATTGGCTCCAATTGATGCTTTTATTGGCTAATTTTCTGGTACGCAGTGGGTTTAGTTCATCGACGATCAATCACCATTCCACAAGTCCTACTTCTCACAGCTCGGAGTGGACTGGAGGTCCAGCGTCTTCTCGTCTTCGAGACTTTGATCGACACCTTCGAAGACCACGTGAGCTCAGCCAATTTTGAATTTCCATCAAAATGTGGAAGCTCGGCGGAGGCGTATTTGGCGACGATGAAGAGCGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTGTGCTCCCTAACACCTGTACAGGTACTTTAAACAACGATCAAATAGCCCGACTTGTGGAAAATTTTATGGGTTTTGCTGTAGTTTTTTTGTTTTTTGTTCCTTTTTTTTTTTTTTTTTCAGTTTTAGTACTTATTTGGATTTTTGCTGAACAGAGACTGTATGGATTTGGAGGCTGCTTGATGGGGGGCGTGGTTTGCATGATTGTGGTACGAACATTTAAGTGACTTCTACATTTGATACAATCGCATATATGTTTATACTATGTGCTTCTTGTGTAAATGAGGAACCTCGATGATAATTTTTGGATTTGGGTCTCAAGTTACGCTCTGGGTATGATCGGTAACGTGGGCTTTCTCTATTTCCATTGATTGTTTTGGGATGTAAATAAGATTTATATTCTCTAACTGTCCATTGGTTGGTCCTTGAGGCTTCAAGTATAAATTAAAAACCCAACAAATAAGAAAGGCGGTATTGAATTTGGTTAGAAAGATAAGGAATTTCCTCTAAGAACGGAATACTAGATGGTCAATTGGGGGGATTGTTTCTACCAATTGAAAAAGGAGGACTCTAGATTGGAGTTTAAGGAAGGAGAATGGACCTTAATTATCAAATGGATATGGAGACATTTTACTGATTCTGATGGATTGCGGAATGACATTAAATCCAGTATTTATGGGACAGAACAGAGGATGTTTTACAAGTAAGGAGGGTTGGGTGCTACTGCTATCAAAGGCCATGGTCCAATATTACAAAACTGAGATGATTTATAAAAGACGTTCACTAGCATTGAGGTGGCAAGTTGAAGGAAAACCTTTTACTGATTATTCTCTTTCTTCCATGATTTTCGATTAGAGAGTTTTCATGTAATTCATCTCAAGGTGTTGGGGTTTTACTCCCTTTATTTCATTCATCAATAAAAATTGTTCTATAAAAATAGAATGAAAATCTTATTCTAGAGAGACCGCTGCATAGGGGAGTCATCTCTGTTGGGAAGATTTTTAAGGTTGCTTGTAGCTCCTGCAGATAGGGAATGACCATAGGTGTAGCTTGGGAGGATGTTCTTGGAATATGACAATCACGAAGAACTTGACTAAACCAGAAATGGGCATTGAGCAAGGAGTTGTCTGCTGCAGTCTGAAGGGAAAGAAGCCCTGAGGAAGTCAACTTCTTTGTGTGGACATTATGTTGTGAAGGTTAATTCGGCTAAGGGGAGGGATTCAAAGGAGACAAGATGATTTTTAAACCCAGTTTGTGTATCCTTTGTTGCAAAGAAGAAAAGGAGCAACATTGCCTCTTTTTTACTGTTATTACTGTAACCTGCGTTGGGAATCTCAACTCAATAAGATGCATTGCACTTAGGCTCTTCAAAGTCAGTAAAAGAGGATGTTATCCAATCATTATCGAGTTACAGACTTGAGAAGCTAGCTAAAACTAGGGTTAATGCAGTAAAAGCAATTTTATCGGGTTTGCAGTTAGATGGGAATACATAATTAGCATACTAAAATGTGCTTCATCCTTGCAATTATCATAATCGGTAAACAATGGGACTATTCTAGAGTTAAAGTTAATTGTCAATAACATAATGCATTACTGGCTATTTGTCGTAAACCAATGTCTTACTCTTTTCACCGCACAGTATCAACAGATGATTTTGTTCATTGTTCTTCTTTCTTCATTGGTGATTTCTTTTAACTCGTGTTCCTTTCCTCCGAAATTCCATTTGGATTTTTGTGATTCTAGATCAACATAACCCATCTCTATTGACTTCTTTTTAGTTCTTTGTCTGAAAACTGCATTTGATGTGTTTGCTCCATTTTCTTCTTTTGGCAGTCACTACTTGTTTTTGCCAAGCCAATCAAATTTGCTGTACTGTTTACATCTGGCAATGTTTTGGCAGTCGGAAGGTTGGTTAACCAATTAAAGTAGACAGCTGTTTCTATAACATTCCTTATGTCAGCAGTTCAGAAGTATTAGGAGCAGCACTTTTGTTCACTTTCATTGCCATTTCACTTGTTCTGATTTGCATCTAATACTTCTTGTAATCTTCTATTTCATAATTTTCCTTCAAGAAGAAGTTTATTGGCGTACAAACAAGGAAGACAATCGAGGGGAAAAGCCTTCAATGTATTTTCACTGCGTTGTTCCTTTTCCTTGGGGTATTAATATTCTAAACCGCCTCTTATTTGGCAGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATGAGAATGATGTTTGATTCTGTTCGTATTTATGCAACAGCTATTTACCTGGGATGTGTTGTTCTAGCTCTTATTTGTGCTCTCTGGGTAAGTTAGAATTCTAAATATACGCCATCATAGGGGAAAACAAACTTAAATTACTCGCACAGAGAGATATTCAATAAACTCTCTTCAATAAGTCTTTGGAACACCAGTGCTAATGGCTTTTTCTATTAGATTGTATGGTCTATTCCTCAAAATCTCCCATTAGACGGTTTTAGTAGTTTTTTCCTTTAACACTTGAATAAAACATGTATCAGTATCTGATATGAACCTGAGATGCACTTGCAAACGGTTAATGCCTCATCTTTAATTTTGATACTGTGTTTCTTTGCTATTTGTTTTTCATTTTTCAGATCCACAATAAGATCTTGACAGTGATTGCGATGATAAGTGAGATATGCGCACTTATATGGTACGTTTACCTTTACCATTGGCCTTCCTTCACTCGATTCAAGTTCATTTGGAACTAGAGGATAAAATAATTTTCTTCGATGAAAATGTGTTTAATCATTTCTTGTGAGACTCTTCTTGAATCTAAACTAGATTGGGCCGTGACTTTCTTGGTATATCCTGTTTCAGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAATTGATGATCCGATTTTGTGACACAGAACTATAGACAATCAAACATGCGATGATAATTGACGATTCAGTCTCTTCAAGATCTGGGATTGTCTTTTGTCTTTGTTGTTTTTATTTTTTAGTGAGCACAAGACCAGTTGGAGATTTGTTTTTATTTTATTTTATTTATTTATTTATTTTGGGTCGAAGTTGATTTTATCCACATAAATGTATAATCCAAAGGCAGTTCATTGCTTGTGCTAATTTTCTAAATATAACAGCATTCTTTTCTCAGAATTAACTCTGTGACCTCTCTCTCTTGATAGATATCTCAATAGGAACTGATTTTCCAGGTAAATCAAAGTCAGAACGTTTAGAATGGAAGTAGGGAGCCCAATCTTCATGCAATAAGCTTCAACTTATTATCTGTTGAAGCCCGTTAAACCTCAGATCCAAAATCATCAAAGTGAGTCATTCTCCAGGTTAGCAGCAATATCTACTTTTTCTAGAGATTCTGATTTGATCCTTTACATGAAATTTTCTACATCATTCCATGTTAAACTACAACCAAATACTAAATTCAAAAAGTTTAAATTGCCAACCTAAGTAAAATTCAATTGGTTTAAGTACATACCCTCGACTAAGAAGTCAGAGGTTCAAATCTTCTAATTCTAAATGTTGTTAAACTCAAAATTCAAAAAGTTTAAGTTGATAGACTAGTGTATATTCGTTCTTGTTTACACATTCTTAACATTCAGGACCACAAACTCAACTATGAATGGACAACCACAAACTCAACCAATCATCAAAAGACAGAAAAGGAAGAAAAAACAGCCCTGTTAGAAAGCCTGGCTTTCTTTTCCTGAATGTCTTGCCTTTTAGCATACATTTTGATGATTTCACATAGTAGTCAGACACATACACGTTGTGATACTTCATTTGGGTTAACTGCTGGG

mRNA sequence

GTAAAATTGGCTCCAATTGATGCTTTTATTGGCTAATTTTCTGGTACGCAGTGGGTTTAGTTCATCGACGATCAATCACCATTCCACAAGTCCTACTTCTCACAGCTCGGAGTGGACTGGAGGTCCAGCGTCTTCTCGTCTTCGAGACTTTGATCGACACCTTCGAAGACCACGTGAGCTCAGCCAATTTTGAATTTCCATCAAAATGTGGAAGCTCGGCGGAGGCGTATTTGGCGACGATGAAGAGCGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTGTGCTCCCTAACACCTGTACAGAGACTGTATGGATTTGGAGGCTGCTTGATGGGGGGCGTGGTTTGCATGATTGTGTCACTACTTGTTTTTGCCAAGCCAATCAAATTTGCTGTACTGTTTACATCTGGCAATGTTTTGGCAGTCGGAAGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATGAGAATGATGTTTGATTCTGTTCGTATTTATGCAACAGCTATTTACCTGGGATGTGTTGTTCTAGCTCTTATTTGTGCTCTCTGGATCCACAATAAGATCTTGACAGTGATTGCGATGATAAGTGAGATATGCGCACTTATATGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAATTGATGATCCGATTTTGTGACACAGAACTATAGACAATCAAACATGCGATGATAATTGACGATTCAGTCTCTTCAAGATCTGGGATTGTCTTTTGTCTTTGTTGTTTTTATTTTTTAGTGAGCACAAGACCAGTTGGAGATTTGTTTTTATTTTATTTTATTTATTTATTTATTTTGGGTCGAAGTTGATTTTATCCACATAAATGTATAATCCAAAGGCAGTTCATTGCTTGTGCTAATTTTCTAAATATAACAGCATTCTTTTCTCAGAATTAACTCTGTGACCTCTCTCTCTTGATAGATATCTCAATAGGAACTGATTTTCCAGGTAAATCAAAGTCAGAACGTTTAGAATGGAAGTAGGGAGCCCAATCTTCATGCAATAAGCTTCAACTTATTATCTGTTGAAGCCCGTTAAACCTCAGATCCAAAATCATCAAAGTGAGTCATTCTCCAGGACCACAAACTCAACTATGAATGGACAACCACAAACTCAACCAATCATCAAAAGACAGAAAAGGAAGAAAAAACAGCCCTGTTAGAAAGCCTGGCTTTCTTTTCCTGAATGTCTTGCCTTTTAGCATACATTTTGATGATTTCACATAGTAGTCAGACACATACACGTTGTGATACTTCATTTGGGTTAACTGCTGGG

Coding sequence (CDS)

ATGTGGAAGCTCGGCGGAGGCGTATTTGGCGACGATGAAGAGCGTGGTCAGAGCTTGTTGGATGAAGATTCAGAAGATCTGTGCTCCCTAACACCTGTACAGAGACTGTATGGATTTGGAGGCTGCTTGATGGGGGGCGTGGTTTGCATGATTGTGTCACTACTTGTTTTTGCCAAGCCAATCAAATTTGCTGTACTGTTTACATCTGGCAATGTTTTGGCAGTCGGAAGCACAGCTTTCCTCTTTGGACCTGGGCAACAAATGAGAATGATGTTTGATTCTGTTCGTATTTATGCAACAGCTATTTACCTGGGATGTGTTGTTCTAGCTCTTATTTGTGCTCTCTGGATCCACAATAAGATCTTGACAGTGATTGCGATGATAAGTGAGATATGCGCACTTATATGGTATAGTTTGAGCTATATTCCTTTTGCCCGGAGGATGGTCTCTGAATTGATGATCCGATTTTGTGACACAGAACTATAG

Protein sequence

MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKPIKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL

Homology

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BLAST of Tan0016141 vs. ExPASy Swiss-Prot
Match: O95562 (Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.9e-19
Identity = 61/155 (39.35%), Postives = 86/155 (55.48%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           M KL   + G D E    L   +  +  SL+   R+ GF  C   G++C ++  ++   P
Sbjct: 1   MDKLKKVLSGQDTEDRSGL--SEVVEASSLSWSTRIKGFIACFAIGILCSLLGTVLLWVP 60

Query: 61  IK----FAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALW 120
            K    FAV +T GN+ ++GST FL GP +Q++ MF+  R+ AT + L C  L L  A W
Sbjct: 61  RKGLHLFAVFYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFW 120

Query: 121 IHNKILTVIAMISEICALIWYSLSYIPFARRMVSE 152
            HNK L +I  I +  AL WYSLS+IPFAR  V +
Sbjct: 121 WHNKGLALIFCILQSLALTWYSLSFIPFARDAVKK 153

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BLAST of Tan0016141 vs. ExPASy Swiss-Prot
Match: Q8VD57 (Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.4e-18
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 0


Query: 19  LLDEDSEDLCSLTPV---------QRLYGFGGCLMGGVVCMIVSLLVFAKPIK----FAV 78
           L  +D+ED   L+ V          R+ GF  C   G++C ++  L+   P K    FAV
Sbjct: 8   LSGQDTEDRSGLSEVVEASSLSWGTRIKGFIACFALGILCSVLGTLLLWVPRKGLGLFAV 67

Query: 79  LFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVI 138
            +T GN++++GST FL GP +Q++ MF+  R+ AT + L C  L L C+ ++ NK L +I
Sbjct: 68  FYTLGNIMSIGSTVFLMGPLKQLKRMFEPTRLIATILVLLCFALTL-CSAFLWNKGLALI 127

Query: 139 AMISEICALIWYSLSYIPFARRMVSE 152
             I +  AL WYSLSYIP+AR  V +
Sbjct: 128 FCILQSLALTWYSLSYIPYARDAVKK 152

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BLAST of Tan0016141 vs. ExPASy Swiss-Prot
Match: Q8WV19 (Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.2e-17
Identity = 63/154 (40.91%), Postives = 87/154 (56.49%), Query Frame = 0


Query: 11  DDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIV--SLLVFAKPIK-FAVLF 70
           DDEE+G   L     D  SL+   RL  F  C + GV   I+   LL     IK FAV +
Sbjct: 12  DDEEQG---LTAQVLDASSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPGGIKLFAVFY 71

Query: 71  TSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAM 130
           T GN+ A+ ST FL GP +Q++ MF++ R+ AT + L C +  L  ALW H K L V+  
Sbjct: 72  TLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWHKKGLAVLFC 131

Query: 131 ISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           I +  ++ WYSLSYIP+AR    + +I+ C + L
Sbjct: 132 ILQFLSMTWYSLSYIPYAR----DAVIKCCSSLL 158

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BLAST of Tan0016141 vs. ExPASy Swiss-Prot
Match: Q5U3Y5 (Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-16
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 11  DDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIV--SLLVFAKPIK-FAVLF 70
           DDEE+G   L     D  SL+   RL  F  C + G+   I+   LL     +K FAV +
Sbjct: 12  DDEEQG---LTAQVLDASSLSFNTRLKWFVICFVAGIFFSILGTGLLWLPNGVKLFAVFY 71

Query: 71  TSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAM 130
           T GN+ A+ ST FL GP +Q++ MF++ R+ AT I L C+V  L  ALW   K L ++  
Sbjct: 72  TLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLFC 131

Query: 131 ISEICALIWYSLSYIPFARRMV 150
           I +  ++ WYSLSYIP+AR  V
Sbjct: 132 ILQFLSMTWYSLSYIPYARDAV 150

[Close]

BLAST of Tan0016141 vs. ExPASy Swiss-Prot
Match: Q5SSN7 (Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 58/142 (40.85%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 11  DDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIV--SLLVFAKPIK-FAVLF 70
           DDEE+G   L     D  SL+   RL  F  C + G+    +   LL     +K FAV +
Sbjct: 12  DDEEQG---LTAQVLDASSLSFNTRLKWFVICFVAGIFFSFLGTGLLWLPNGMKLFAVFY 71

Query: 71  TSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAM 130
           T GN+ A+ ST FL GP +Q++ MF++ R+ AT I L C+V  L  ALW   K L ++  
Sbjct: 72  TLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKKGLALLFC 131

Query: 131 ISEICALIWYSLSYIPFARRMV 150
           I +  ++ WYSLSYIP+AR  V
Sbjct: 132 ILQFLSMTWYSLSYIPYARDAV 150

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BLAST of Tan0016141 vs. NCBI nr
Match: XP_022945270.1 (vesicle transport protein SFT2B [Cucurbita moschata] >XP_022968626.1 vesicle transport protein SFT2B [Cucurbita maxima] >KAG6574237.1 Vesicle transport protein SFT2B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013303.1 Vesicle transport protein SFT2B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.8 bits (769), Expect = 6.9e-78
Identity = 155/161 (96.27%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKLG GVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCL GGVVCMIVSLLVFAKP
Sbjct: 1   MWKLGLGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           IKFA LFT GNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICAL IHNK
Sbjct: 61  IKFAALFTFGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALLIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTVIAM SEICALIWYSLSYIPFARRMVSELMIRFCDTEL
Sbjct: 121 ILTVIAMTSEICALIWYSLSYIPFARRMVSELMIRFCDTEL 161

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BLAST of Tan0016141 vs. NCBI nr
Match: XP_023541346.1 (vesicle transport protein SFT2B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 3.4e-77
Identity = 154/161 (95.65%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKLG  VFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCL GGVVCMIVSLLVFAKP
Sbjct: 1   MWKLGLAVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           IKFA LFT GNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICAL IHNK
Sbjct: 61  IKFAALFTFGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALLIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTVIAM SEICALIWYSLSYIPFARRMVSELMIRFCDTEL
Sbjct: 121 ILTVIAMTSEICALIWYSLSYIPFARRMVSELMIRFCDTEL 161

[Close]

BLAST of Tan0016141 vs. NCBI nr
Match: XP_022141325.1 (vesicle transport protein SFT2B isoform X3 [Momordica charantia])

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-76
Identity = 150/161 (93.17%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKL  GVFGDDEERGQSLLDEDSEDLCSL+PVQRLYGFG CL GGVVCM++SLLVFAKP
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVLSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           IKFAVLFT GNVLAVGSTAFLFGPGQQ+RMMFDSVRIYATAIYLGCVVLALICALWIHNK
Sbjct: 61  IKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTVIA+ISEICALIWYSLSYIPFARRMVSELMIR CDTEL
Sbjct: 121 ILTVIAIISEICALIWYSLSYIPFARRMVSELMIRLCDTEL 161

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BLAST of Tan0016141 vs. NCBI nr
Match: XP_038880533.1 (vesicle transport protein SFT2B [Benincasa hispida])

HSP 1 Score: 295.0 bits (754), Expect = 3.8e-76
Identity = 150/161 (93.17%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKL  GVF DDEE GQSLLDEDSEDLCSLTPVQRLY FGGCL GGVVCMI+SLLVFAKP
Sbjct: 1   MWKLSRGVFVDDEEHGQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           +KFAVLFT GNVLAVGSTAFLFGPGQQ+RMMFDSVRIYATAIYLGCVVL LICALWIHNK
Sbjct: 61  LKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATAIYLGCVVLGLICALWIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL
Sbjct: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 161

[Close]

BLAST of Tan0016141 vs. NCBI nr
Match: XP_008441622.1 (PREDICTED: vesicle transport protein SFT2B [Cucumis melo])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 147/161 (91.30%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKL  GVF DDEER QSLLDEDSEDLCSLTPVQRLY FGGCL GGVVCMI+SLLVFAKP
Sbjct: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           +KFAVLFT GNVLAVGSTAFLFGPGQQ+RMMFDSVRI+ATAIYLGCVVLALICALWIHNK
Sbjct: 61  LKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTV AMISEICALIWYSLSYIPFARRMVS+LM+RFCDTEL
Sbjct: 121 ILTVFAMISEICALIWYSLSYIPFARRMVSQLMVRFCDTEL 161

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BLAST of Tan0016141 vs. ExPASy TrEMBL
Match: A0A6J1HVF1 (Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111467788 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.4e-78
Identity = 155/161 (96.27%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKLG GVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCL GGVVCMIVSLLVFAKP
Sbjct: 1   MWKLGLGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           IKFA LFT GNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICAL IHNK
Sbjct: 61  IKFAALFTFGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALLIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTVIAM SEICALIWYSLSYIPFARRMVSELMIRFCDTEL
Sbjct: 121 ILTVIAMTSEICALIWYSLSYIPFARRMVSELMIRFCDTEL 161

[Close]

BLAST of Tan0016141 vs. ExPASy TrEMBL
Match: A0A6J1G0G6 (Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111449568 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.4e-78
Identity = 155/161 (96.27%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKLG GVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCL GGVVCMIVSLLVFAKP
Sbjct: 1   MWKLGLGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLTGGVVCMIVSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           IKFA LFT GNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICAL IHNK
Sbjct: 61  IKFAALFTFGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALLIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTVIAM SEICALIWYSLSYIPFARRMVSELMIRFCDTEL
Sbjct: 121 ILTVIAMTSEICALIWYSLSYIPFARRMVSELMIRFCDTEL 161

[Close]

BLAST of Tan0016141 vs. ExPASy TrEMBL
Match: A0A6J1CHR6 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.8e-77
Identity = 150/161 (93.17%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKL  GVFGDDEERGQSLLDEDSEDLCSL+PVQRLYGFG CL GGVVCM++SLLVFAKP
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVLSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           IKFAVLFT GNVLAVGSTAFLFGPGQQ+RMMFDSVRIYATAIYLGCVVLALICALWIHNK
Sbjct: 61  IKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTVIA+ISEICALIWYSLSYIPFARRMVSELMIR CDTEL
Sbjct: 121 ILTVIAIISEICALIWYSLSYIPFARRMVSELMIRLCDTEL 161

[Close]

BLAST of Tan0016141 vs. ExPASy TrEMBL
Match: A0A1S3B3W0 (Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103485702 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 147/161 (91.30%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKP 60
           MWKL  GVF DDEER QSLLDEDSEDLCSLTPVQRLY FGGCL GGVVCMI+SLLVFAKP
Sbjct: 1   MWKLSDGVFVDDEERSQSLLDEDSEDLCSLTPVQRLYAFGGCLTGGVVCMILSLLVFAKP 60

Query: 61  IKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNK 120
           +KFAVLFT GNVLAVGSTAFLFGPGQQ+RMMFDSVRI+ATAIYLGCVVLALICALWIHNK
Sbjct: 61  LKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIFATAIYLGCVVLALICALWIHNK 120

Query: 121 ILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           ILTV AMISEICALIWYSLSYIPFARRMVS+LM+RFCDTEL
Sbjct: 121 ILTVFAMISEICALIWYSLSYIPFARRMVSQLMVRFCDTEL 161

[Close]

BLAST of Tan0016141 vs. ExPASy TrEMBL
Match: A0A6J1CIC0 (Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.9e-73
Identity = 150/181 (82.87%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 1   MWKLGGGVFGDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIV-------- 60
           MWKL  GVFGDDEERGQSLLDEDSEDLCSL+PVQRLYGFG CL GGVVCM++        
Sbjct: 1   MWKLSRGVFGDDEERGQSLLDEDSEDLCSLSPVQRLYGFGACLTGGVVCMVLAICLVLMS 60

Query: 61  ------------SLLVFAKPIKFAVLFTSGNVLAVGSTAFLFGPGQQMRMMFDSVRIYAT 120
                       SLLVFAKPIKFAVLFT GNVLAVGSTAFLFGPGQQ+RMMFDSVRIYAT
Sbjct: 61  YTSHYPASTDDFSLLVFAKPIKFAVLFTFGNVLAVGSTAFLFGPGQQIRMMFDSVRIYAT 120

Query: 121 AIYLGCVVLALICALWIHNKILTVIAMISEICALIWYSLSYIPFARRMVSELMIRFCDTE 162
           AIYLGCVVLALICALWIHNKILTVIA+ISEICALIWYSLSYIPFARRMVSELMIR CDTE
Sbjct: 121 AIYLGCVVLALICALWIHNKILTVIAIISEICALIWYSLSYIPFARRMVSELMIRLCDTE 180

[Close]

BLAST of Tan0016141 vs. TAIR 10
Match: AT5G24170.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-51
Identity = 102/152 (67.11%), Postives = 123/152 (80.92%), Query Frame = 0


Query: 10  GDDEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKPIKFAVLFTS 69
           GD +    S L++ SE LC+L+  QR+YGF   L  G++ M +S++VF  PIKFA+LFT 
Sbjct: 12  GDGDGTTDSFLEDGSEGLCALSTTQRMYGFAASLATGLLLMFLSMIVFGIPIKFALLFTF 71

Query: 70  GNVLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAMIS 129
           GNVLA+GSTAFL GP QQM MMFD VR  AT+IY+GCVV+ALICAL IH+KILTV+A++ 
Sbjct: 72  GNVLAIGSTAFLMGPEQQMSMMFDPVRFLATSIYIGCVVVALICALLIHSKILTVLAILC 131

Query: 130 EICALIWYSLSYIPFARRMVSELMIRFCDTEL 162
           EICALIWYSLSYIPFARRMVSE+MIR CDTEL
Sbjct: 132 EICALIWYSLSYIPFARRMVSEIMIRLCDTEL 163

[Close]

BLAST of Tan0016141 vs. TAIR 10
Match: AT5G23550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-39
Identity = 81/149 (54.36%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 12  DEERGQSLLDEDSEDLCSLTPVQRLYGFGGCLMGGVVCMIVSLLVFAKPIKFAVLFTSGN 71
           DEE   S + ED    C+LT  QR YGF  CL  G+ C ++S+LVF  P+KF + FT GN
Sbjct: 27  DEESSLSFM-EDLNRNCALTTKQRFYGFAICLSAGLTCTLLSMLVFFNPVKFGITFTLGN 86

Query: 72  VLAVGSTAFLFGPGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAMISEI 131
           ++A+GSTAFL GP +Q+ MM D  RIYATA+YL  +++AL CAL++ NK+LT++A+I E 
Sbjct: 87  LMALGSTAFLIGPQRQVTMMLDPARIYATALYLASIIIALFCALYVRNKLLTLLAIILEF 146

Query: 132 CALIWYSLSYIPFARRMVSELMIRFCDTE 161
             LIWYSLSYIPFAR MVS++ +   DTE
Sbjct: 147 TGLIWYSLSYIPFARTMVSKIFMTCFDTE 174

[Close]

BLAST of Tan0016141 vs. TAIR 10
Match: AT4G26550.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-06
Identity = 35/120 (29.17%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 29  SLTPVQRLYGFGGCLMGGVVCMIVSLLVF-----AKPIKFAVLFTSGNVLAVGSTAFLFG 88
           S+   + L  FG  L  GV  + ++  +F       P KFA+ FT G    +GS   L G
Sbjct: 83  SMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCGFIIGSFFALRG 142

Query: 89  PGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAMISEICALIWYSLSYIP 144
           P  Q+  M    R+ +T  ++  +V  +  ++ +H+ IL+V+  + ++ AL++Y +SY P
Sbjct: 143 PKNQLAHMSSMERLPSTLGFIATMVGTIYVSMVLHSYILSVLFSVLQVLALVYYCISYFP 202

[Close]

BLAST of Tan0016141 vs. TAIR 10
Match: AT5G56020.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 46.6 bits (109), Expect = 2.2e-05
Identity = 36/120 (30.00%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 29  SLTPVQRLYGFGGCLMGGVVCMIVSLLVF-----AKPIKFAVLFTSGNVLAVGSTAFLFG 88
           S+   + L  FG  L  GV  + ++  +F       P KFA+ FT G    +GS   L G
Sbjct: 88  SMPSGKALMYFGLLLASGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCGFIIGSFFALRG 147

Query: 89  PGQQMRMMFDSVRIYATAIYLGCVVLALICALWIHNKILTVIAMISEICALIWYSLSYIP 144
           P  Q+  M  + R+  T  ++  +V  +  ++ +H+ IL+VI    ++ AL +Y +SY P
Sbjct: 148 PQNQLAHMSSAERLPLTLGFIATMVGTIYVSMVLHSYILSVIFSALQVIALAYYCISYFP 207

The following BLAST results are available for this feature:

BLAST of Tan0016141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O95562	9.9e-19	39.35	Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1	[more]
Q8VD57	8.4e-18	39.04	Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1	[more]
Q8WV19	4.2e-17	40.91	Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1	[more]
Q5U3Y5	4.6e-16	41.55	Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=...	[more]
Q5SSN7	2.3e-15	40.85	Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1	[more]

BLAST of Tan0016141 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945270.1	6.9e-78	96.27	vesicle transport protein SFT2B [Cucurbita moschata] >XP_022968626.1 vesicle tra...	[more]
XP_023541346.1	3.4e-77	95.65	vesicle transport protein SFT2B [Cucurbita pepo subsp. pepo]	[more]
XP_022141325.1	1.0e-76	93.17	vesicle transport protein SFT2B isoform X3 [Momordica charantia]	[more]
XP_038880533.1	3.8e-76	93.17	vesicle transport protein SFT2B [Benincasa hispida]	[more]
XP_008441622.1	3.2e-75	91.30	PREDICTED: vesicle transport protein SFT2B [Cucumis melo]	[more]

BLAST of Tan0016141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVF1	3.4e-78	96.27	Vesicle transport protein OS=Cucurbita maxima OX=3661 GN=LOC111467788 PE=3 SV=1	[more]
A0A6J1G0G6	3.4e-78	96.27	Vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111449568 PE=3 SV=...	[more]
A0A6J1CHR6	4.8e-77	93.17	Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV...	[more]
A0A1S3B3W0	1.6e-75	91.30	Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103485702 PE=3 SV=1	[more]
A0A6J1CIC0	1.9e-73	82.87	Vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011745 PE=3 SV...	[more]

BLAST of Tan0016141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24170.1	1.2e-51	67.11	Got1/Sft2-like vescicle transport protein family	[more]
AT5G23550.1	1.4e-39	54.36	Got1/Sft2-like vescicle transport protein family	[more]
AT4G26550.1	4.4e-06	29.17	Got1/Sft2-like vescicle transport protein family	[more]
AT5G56020.1	2.2e-05	30.00	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 40..121 e-value: 5.0E-26 score: 91.3
None	No IPR available	PANTHER	PTHR23137:SF29	VESICLE TRANSPORT PROTEIN	coord: 40..130
IPR011691	Vesicle transport protein SFT2	PANTHER	PTHR23137	UNCHARACTERIZED	coord: 40..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016141.1	Tan0016141.1	mRNA
Tan0016141.2	Tan0016141.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane