Tan0016140 (gene) Snake gourd v1

Overview
NameTan0016140
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionALBINO3-like protein 2, chloroplastic
LocationLG01: 47843933 .. 47844997 (+)
RNA-Seq ExpressionTan0016140
SyntenyTan0016140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGTTGGCAAACTTTTTTCAGAAATGATCTGCTTGGATGGATTTCACAAGTCCATCATATTTCCAACTGCCAGAACTACCACGATTTTTGAAAGAGTTGTACAAACAAATGGGGTTTTCAGTAACGAGCTTCTTCTTTTTCTCCTGTCTCTCAAAAAATAAAAAATGAAAAATAACTAAGGGCTTGCTTTGGGGACCTCCTTGTAGATTTCTCGAGTAAAGAGTTTTTTTTTTGTAATTTCTCTCTTCATTAATGTGGTTGGAGATCATTTCTCTAATCTCTTAGCTTTGGGTTCTGTAGGGTATCTTATCTTTCTGATTTTGTATATATTTTCCTCTTTTATAGAAAGTTTTATATTTCCTTTTTGAAATTGTCTCAATTTTTGTGGACTTTTTGGTAGTTTGAATAACCTCTGGTTAGGTTTGCATATTTTCAGAAGCTTATGTTTATATCATTTTTGCAGCAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTCTCAAGGATGCTCCTATGGGCACTGCAACTCTCAGAGAACCGTTGGATACACCCACCACGTGGAAAAAATTTTCTATAGAGAGGCTGTCTCCTAAGGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTTTCTTTTTATGTTGTTTCAAGTTAATGTAATACAAACGTTTTCAGGTAGCTAATGATTAAAATTGACAGCTTTCTGTCCAACTCCTATCAAAAGGGCAAAAGGAAAGGGCTATTCCTTTACTGCGGTAAGATCTTTAGTCTTCCCTCTTTAGATTTCACTATCATGTATATCTTCTATATGGCCTATCTGGTGGGTGATTTTTCGCCTAAACTGCGAGGGAAAAAAAAGACCAGAAATGACTAATTTAATATTTTAGTCAGGCACTTAACAAGGAACCTGAGTATGTTCGGGCTTTGATTGTCATGGGACAAACTCTGTTACAAAATGGTCAACCTGCAGAGGCTACTGCATACTTAGAGCGTGCAATTTCCAAGGTCCGAGTCCAAGTGTTGTATTTTCTTTTTTCGATTACTGTATGA

mRNA sequence

ATGATGGTTGGCAAACTTTTTTCAGAAATGATCTGCTTGGATGGATTTCACAAGTCCATCATATTTCCAACTGCCAGAACTACCACGATTTTTGAAAGACAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTCTCAAGGATGCTCCTATGGGCACTGCAACTCTCAGAGAACCGTTGGATACACCCACCACGTGGAAAAAATTTTCTATAGAGAGGCTGTCTCCTAAGGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTTTCTTTTTATGTTGTTTCAAGTTAATGCACTTAACAAGGAACCTGAGTATGTTCGGGCTTTGATTGTCATGGGACAAACTCTGTTACAAAATGGTCAACCTGCAGAGGCTACTGCATACTTAGAGCGTGCAATTTCCAAGGTCCGAGTCCAAGTGTTGTATTTTCTTTTTTCGATTACTGTATGA

Coding sequence (CDS)

ATGATGGTTGGCAAACTTTTTTCAGAAATGATCTGCTTGGATGGATTTCACAAGTCCATCATATTTCCAACTGCCAGAACTACCACGATTTTTGAAAGACAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTCTCAAGGATGCTCCTATGGGCACTGCAACTCTCAGAGAACCGTTGGATACACCCACCACGTGGAAAAAATTTTCTATAGAGAGGCTGTCTCCTAAGGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTTTCTTTTTATGTTGTTTCAAGTTAATGCACTTAACAAGGAACCTGAGTATGTTCGGGCTTTGATTGTCATGGGACAAACTCTGTTACAAAATGGTCAACCTGCAGAGGCTACTGCATACTTAGAGCGTGCAATTTCCAAGGTCCGAGTCCAAGTGTTGTATTTTCTTTTTTCGATTACTGTATGA

Protein sequence

MMVGKLFSEMICLDGFHKSIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLREPLDTPTTWKKFSIERLSPKELLAVNYAELNFLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQPAEATAYLERAISKVRVQVLYFLFSITV
Homology
BLAST of Tan0016140 vs. ExPASy Swiss-Prot
Match: Q8L718 (ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 4.2e-11
Identity = 47/134 (35.07%), Postives = 80/134 (59.70%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMG-------TATLREPLDTPTTWK 78
           S+++    ++    +QL+L+HP V +KLGL  + A  G       + ++ + +D+ +  +
Sbjct: 278 SLVYWVTNSSVNIFQQLSLKHPTVGAKLGLLSQGATPGMGHSMEISESVIKYVDSDSKEQ 337

Query: 79  KFSIERLSPKELLAVNYAELN-----FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQP 138
             S++ L+P+ELL+++   L+         L ++ AL K+P YVR L++MGQ LLQ  Q 
Sbjct: 338 TLSLQTLTPEELLSLSVQVLSKGDKETSIQLLRL-ALEKDPGYVRGLVLMGQALLQKTQL 397

Query: 139 AEATAYLERAISKV 141
           +EAT YLE AISK+
Sbjct: 398 SEATEYLELAISKL 410

BLAST of Tan0016140 vs. ExPASy Swiss-Prot
Match: Q0WUC5 (ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.7e-08
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDA-------PMGTATLREPLDTPTT-W 78
           S+++     +    +Q  L HP V +KLGL   D+       P+ T      L  P++  
Sbjct: 317 SLLYWATNLSFSIAQQSILNHPVVSAKLGLQANDSVQKEAGNPILTNINEGKLTDPSSKG 376

Query: 79  KKFSIERLSPKELLAVNYAEL-----NFLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           +  S+  L+PKEL+A++   L     +    L ++ AL K+PEY++A+I++GQ L Q  Q
Sbjct: 377 RLISVHNLTPKELVALSAKYLSGGHKDKSIPLLRL-ALEKDPEYLQAMIILGQALYQKDQ 436

Query: 139 PAEATAYLERAISKV 141
            AEA   LE+A SK+
Sbjct: 437 FAEAAKCLEQAASKL 450

BLAST of Tan0016140 vs. NCBI nr
Match: KAG7029926.1 (ALBINO3-like protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-37
Identity = 92/147 (62.59%), Postives = 108/147 (73.47%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 339 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 398

Query: 79  KFSIERLSPKELLAVNYAELNFLFMLFQVN------------------ALNKEPEYVRAL 138
           K  +E+LSPKELLAVNYAEL+FLF+L Q++                  ALNK+PEYVRAL
Sbjct: 399 KIYVEKLSPKELLAVNYAELSFLFVLVQLSVQLLSKGQKEKAIPLLRQALNKDPEYVRAL 458

Query: 139 IVMGQTLLQNGQPAEATAYLERAISKV 141
           IVMGQTLLQNGQPAEA A+LERAISK+
Sbjct: 459 IVMGQTLLQNGQPAEAIAFLERAISKL 485

BLAST of Tan0016140 vs. NCBI nr
Match: XP_022973911.1 (ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-31
Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 325 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 384

Query: 79  KFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           K  +E+LSPKELLA++   L+       + +L Q  ALNK+PEYVRALIVMGQTLLQNGQ
Sbjct: 385 KIYVEKLSPKELLALSVQLLSKGQKEKAIPLLRQ--ALNKDPEYVRALIVMGQTLLQNGQ 444

Query: 139 PAEATAYLERAIS-KVRVQV 145
           PAEA A+LERAIS K+RV++
Sbjct: 445 PAEAIAFLERAISKKLRVKI 462

BLAST of Tan0016140 vs. NCBI nr
Match: XP_022933145.1 (ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-31
Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 325 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 384

Query: 79  KFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           K  +E+LSPKELLA++   L+       + +L Q  ALNK+PEYVRALIVMGQTLLQNGQ
Sbjct: 385 KIYVEKLSPKELLALSVQLLSKGQKEKAIPLLRQ--ALNKDPEYVRALIVMGQTLLQNGQ 444

Query: 139 PAEATAYLERAIS-KVRVQV 145
           PAEA A+LERAIS K+RV++
Sbjct: 445 PAEAIAFLERAISKKLRVKI 462

BLAST of Tan0016140 vs. NCBI nr
Match: XP_022973910.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31
Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 325 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 384

Query: 79  KFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           K  +E+LSPKELLA++   L+       + +L Q  ALNK+PEYVRALIVMGQTLLQNGQ
Sbjct: 385 KIYVEKLSPKELLALSVQLLSKGQKEKAIPLLRQ--ALNKDPEYVRALIVMGQTLLQNGQ 444

Query: 139 PAEATAYLERAISKV 141
           PAEA A+LERAISK+
Sbjct: 445 PAEAIAFLERAISKL 457

BLAST of Tan0016140 vs. NCBI nr
Match: XP_022933144.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31
Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 325 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 384

Query: 79  KFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           K  +E+LSPKELLA++   L+       + +L Q  ALNK+PEYVRALIVMGQTLLQNGQ
Sbjct: 385 KIYVEKLSPKELLALSVQLLSKGQKEKAIPLLRQ--ALNKDPEYVRALIVMGQTLLQNGQ 444

Query: 139 PAEATAYLERAISKV 141
           PAEA A+LERAISK+
Sbjct: 445 PAEAIAFLERAISKL 457

BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1I9X8 (ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472541 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.7e-32
Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 325 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 384

Query: 79  KFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           K  +E+LSPKELLA++   L+       + +L Q  ALNK+PEYVRALIVMGQTLLQNGQ
Sbjct: 385 KIYVEKLSPKELLALSVQLLSKGQKEKAIPLLRQ--ALNKDPEYVRALIVMGQTLLQNGQ 444

Query: 139 PAEATAYLERAIS-KVRVQV 145
           PAEA A+LERAIS K+RV++
Sbjct: 445 PAEAIAFLERAISKKLRVKI 462

BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1F440 (ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.7e-32
Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 325 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 384

Query: 79  KFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           K  +E+LSPKELLA++   L+       + +L Q  ALNK+PEYVRALIVMGQTLLQNGQ
Sbjct: 385 KIYVEKLSPKELLALSVQLLSKGQKEKAIPLLRQ--ALNKDPEYVRALIVMGQTLLQNGQ 444

Query: 139 PAEATAYLERAIS-KVRVQV 145
           PAEA A+LERAIS K+RV++
Sbjct: 445 PAEAIAFLERAISKKLRVKI 462

BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1ICK0 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472541 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 325 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 384

Query: 79  KFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           K  +E+LSPKELLA++   L+       + +L Q  ALNK+PEYVRALIVMGQTLLQNGQ
Sbjct: 385 KIYVEKLSPKELLALSVQLLSKGQKEKAIPLLRQ--ALNKDPEYVRALIVMGQTLLQNGQ 444

Query: 139 PAEATAYLERAISKV 141
           PAEA A+LERAISK+
Sbjct: 445 PAEAIAFLERAISKL 457

BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1EYX9 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLRE-------PLDTPTTWK 78
           S+++    ++    +QLTLQHPAVRSKLGLP KDAP+GTATLRE       PLDTPT WK
Sbjct: 325 SLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPFKDAPVGTATLRETNDPGKLPLDTPTKWK 384

Query: 79  KFSIERLSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           K  +E+LSPKELLA++   L+       + +L Q  ALNK+PEYVRALIVMGQTLLQNGQ
Sbjct: 385 KIYVEKLSPKELLALSVQLLSKGQKEKAIPLLRQ--ALNKDPEYVRALIVMGQTLLQNGQ 444

Query: 139 PAEATAYLERAISKV 141
           PAEA A+LERAISK+
Sbjct: 445 PAEAIAFLERAISKL 457

BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1CTF9 (ALBINO3-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014174 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.9e-30
Identity = 82/129 (63.57%), Postives = 98/129 (75.97%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATL-REPLDTPTTWKKFSIER 78
           S+I+    ++    +QLTLQHPAVRSKLGLPLKDAPMGT    + PLDTPT WK+ S+E+
Sbjct: 324 SLIYWVTNSSFTAIQQLTLQHPAVRSKLGLPLKDAPMGTNNPGKAPLDTPTKWKRISVEK 383

Query: 79  LSPKELLAVNYAELN------FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQPAEATA 138
           LSPKELLA++   L+       + +L Q  ALNKEPEYVRALIVMGQTLLQ+GQP EAT 
Sbjct: 384 LSPKELLALSVQLLSKGQKERAIPLLRQ--ALNKEPEYVRALIVMGQTLLQSGQPEEATE 443

Query: 139 YLERAISKV 141
           YLERAISK+
Sbjct: 444 YLERAISKL 450

BLAST of Tan0016140 vs. TAIR 10
Match: AT1G65080.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain )

HSP 1 Score: 69.3 bits (168), Expect = 3.0e-12
Identity = 47/134 (35.07%), Postives = 80/134 (59.70%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMG-------TATLREPLDTPTTWK 78
           S+++    ++    +QL+L+HP V +KLGL  + A  G       + ++ + +D+ +  +
Sbjct: 278 SLVYWVTNSSVNIFQQLSLKHPTVGAKLGLLSQGATPGMGHSMEISESVIKYVDSDSKEQ 337

Query: 79  KFSIERLSPKELLAVNYAELN-----FLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQP 138
             S++ L+P+ELL+++   L+         L ++ AL K+P YVR L++MGQ LLQ  Q 
Sbjct: 338 TLSLQTLTPEELLSLSVQVLSKGDKETSIQLLRL-ALEKDPGYVRGLVLMGQALLQKTQL 397

Query: 139 AEATAYLERAISKV 141
           +EAT YLE AISK+
Sbjct: 398 SEATEYLELAISKL 410

BLAST of Tan0016140 vs. TAIR 10
Match: AT3G44370.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain )

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0

Query: 19  SIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDA-------PMGTATLREPLDTPTT-W 78
           S+++     +    +Q  L HP V +KLGL   D+       P+ T      L  P++  
Sbjct: 317 SLLYWATNLSFSIAQQSILNHPVVSAKLGLQANDSVQKEAGNPILTNINEGKLTDPSSKG 376

Query: 79  KKFSIERLSPKELLAVNYAEL-----NFLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQ 138
           +  S+  L+PKEL+A++   L     +    L ++ AL K+PEY++A+I++GQ L Q  Q
Sbjct: 377 RLISVHNLTPKELVALSAKYLSGGHKDKSIPLLRL-ALEKDPEYLQAMIILGQALYQKDQ 436

Query: 139 PAEATAYLERAISKV 141
            AEA   LE+A SK+
Sbjct: 437 FAEAAKCLEQAASKL 450

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L7184.2e-1135.07ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 ... [more]
Q0WUC55.7e-0833.33ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 ... [more]
Match NameE-valueIdentityDescription
KAG7029926.11.5e-3762.59ALBINO3-like protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_022973911.11.6e-3161.43ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita maxima][more]
XP_022933145.11.6e-3161.43ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita moschata][more]
XP_022973910.12.1e-3162.22ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima][more]
XP_022933144.12.1e-3162.22ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1I9X87.7e-3261.43ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1F4407.7e-3261.43ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1ICK01.0e-3162.22ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1EYX91.0e-3162.22ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1CTF91.9e-3063.57ALBINO3-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11101... [more]
Match NameE-valueIdentityDescription
AT1G65080.13.0e-1235.07Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain [more]
AT3G44370.14.1e-0933.33Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 98..148
e-value: 5.4E-5
score: 25.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 100..139
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 24..141
NoneNo IPR availablePANTHERPTHR12428:SF53ALBINO3-LIKE PROTEIN 3, MITOCHONDRIALcoord: 24..141

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0016140.1Tan0016140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0032977 membrane insertase activity
molecular_function GO:0005515 protein binding