Tan0016140 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTTGGCAAACTTTTTTCAGAAATGATCTGCTTGGATGGATTTCACAAGTCCATCATATTTCCAACTGCCAGAACTACCACGATTTTTGAAAGAGTTGTACAAACAAATGGGGTTTTCAGTAACGAGCTTCTTCTTTTTCTCCTGTCTCTCAAAAAATAAAAAATGAAAAATAACTAAGGGCTTGCTTTGGGGACCTCCTTGTAGATTTCTCGAGTAAAGAGTTTTTTTTTTGTAATTTCTCTCTTCATTAATGTGGTTGGAGATCATTTCTCTAATCTCTTAGCTTTGGGTTCTGTAGGGTATCTTATCTTTCTGATTTTGTATATATTTTCCTCTTTTATAGAAAGTTTTATATTTCCTTTTTGAAATTGTCTCAATTTTTGTGGACTTTTTGGTAGTTTGAATAACCTCTGGTTAGGTTTGCATATTTTCAGAAGCTTATGTTTATATCATTTTTGCAGCAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTCTCAAGGATGCTCCTATGGGCACTGCAACTCTCAGAGAACCGTTGGATACACCCACCACGTGGAAAAAATTTTCTATAGAGAGGCTGTCTCCTAAGGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTTTCTTTTTATGTTGTTTCAAGTTAATGTAATACAAACGTTTTCAGGTAGCTAATGATTAAAATTGACAGCTTTCTGTCCAACTCCTATCAAAAGGGCAAAAGGAAAGGGCTATTCCTTTACTGCGGTAAGATCTTTAGTCTTCCCTCTTTAGATTTCACTATCATGTATATCTTCTATATGGCCTATCTGGTGGGTGATTTTTCGCCTAAACTGCGAGGGAAAAAAAAGACCAGAAATGACTAATTTAATATTTTAGTCAGGCACTTAACAAGGAACCTGAGTATGTTCGGGCTTTGATTGTCATGGGACAAACTCTGTTACAAAATGGTCAACCTGCAGAGGCTACTGCATACTTAGAGCGTGCAATTTCCAAGGTCCGAGTCCAAGTGTTGTATTTTCTTTTTTCGATTACTGTATGA ATGATGGTTGGCAAACTTTTTTCAGAAATGATCTGCTTGGATGGATTTCACAAGTCCATCATATTTCCAACTGCCAGAACTACCACGATTTTTGAAAGACAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTCTCAAGGATGCTCCTATGGGCACTGCAACTCTCAGAGAACCGTTGGATACACCCACCACGTGGAAAAAATTTTCTATAGAGAGGCTGTCTCCTAAGGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTTTCTTTTTATGTTGTTTCAAGTTAATGCACTTAACAAGGAACCTGAGTATGTTCGGGCTTTGATTGTCATGGGACAAACTCTGTTACAAAATGGTCAACCTGCAGAGGCTACTGCATACTTAGAGCGTGCAATTTCCAAGGTCCGAGTCCAAGTGTTGTATTTTCTTTTTTCGATTACTGTATGA ATGATGGTTGGCAAACTTTTTTCAGAAATGATCTGCTTGGATGGATTTCACAAGTCCATCATATTTCCAACTGCCAGAACTACCACGATTTTTGAAAGACAATTAACCCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTCTCAAGGATGCTCCTATGGGCACTGCAACTCTCAGAGAACCGTTGGATACACCCACCACGTGGAAAAAATTTTCTATAGAGAGGCTGTCTCCTAAGGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTTTCTTTTTATGTTGTTTCAAGTTAATGCACTTAACAAGGAACCTGAGTATGTTCGGGCTTTGATTGTCATGGGACAAACTCTGTTACAAAATGGTCAACCTGCAGAGGCTACTGCATACTTAGAGCGTGCAATTTCCAAGGTCCGAGTCCAAGTGTTGTATTTTCTTTTTTCGATTACTGTATGA MMVGKLFSEMICLDGFHKSIIFPTARTTTIFERQLTLQHPAVRSKLGLPLKDAPMGTATLREPLDTPTTWKKFSIERLSPKELLAVNYAELNFLFMLFQVNALNKEPEYVRALIVMGQTLLQNGQPAEATAYLERAISKVRVQVLYFLFSITV Homology
BLAST of Tan0016140 vs. ExPASy Swiss-Prot
Match: Q8L718 (ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALB3L2 PE=2 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-11 Identity = 47/134 (35.07%), Postives = 80/134 (59.70%), Query Frame = 0
BLAST of Tan0016140 vs. ExPASy Swiss-Prot
Match: Q0WUC5 (ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALB3L3 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.7e-08 Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of Tan0016140 vs. NCBI nr
Match: KAG7029926.1 (ALBINO3-like protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.8 bits (421), Expect = 1.5e-37 Identity = 92/147 (62.59%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of Tan0016140 vs. NCBI nr
Match: XP_022973911.1 (ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita maxima]) HSP 1 Score: 146.7 bits (369), Expect = 1.6e-31 Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of Tan0016140 vs. NCBI nr
Match: XP_022933145.1 (ALBINO3-like protein 2, chloroplastic isoform X2 [Cucurbita moschata]) HSP 1 Score: 146.7 bits (369), Expect = 1.6e-31 Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of Tan0016140 vs. NCBI nr
Match: XP_022973910.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31 Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0
BLAST of Tan0016140 vs. NCBI nr
Match: XP_022933144.1 (ALBINO3-like protein 2, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31 Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0
BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1I9X8 (ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472541 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 7.7e-32 Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1F440 (ALBINO3-like protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 7.7e-32 Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1ICK0 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472541 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31 Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0
BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1EYX9 (ALBINO3-like protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439944 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31 Identity = 84/135 (62.22%), Postives = 101/135 (74.81%), Query Frame = 0
BLAST of Tan0016140 vs. ExPASy TrEMBL
Match: A0A6J1CTF9 (ALBINO3-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014174 PE=3 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.9e-30 Identity = 82/129 (63.57%), Postives = 98/129 (75.97%), Query Frame = 0
BLAST of Tan0016140 vs. TAIR 10
Match: AT1G65080.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain ) HSP 1 Score: 69.3 bits (168), Expect = 3.0e-12 Identity = 47/134 (35.07%), Postives = 80/134 (59.70%), Query Frame = 0
BLAST of Tan0016140 vs. TAIR 10
Match: AT3G44370.1 (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain ) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09 Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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