Tan0016135 (gene) Snake gourd v1

Overview


Name	Tan0016135
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ribosomal protein
Location	LG05: 1003959 .. 1006151 (+)
RNA-Seq Expression	Tan0016135
Synteny	Tan0016135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCGATAATAAAGATTTGTCACCGCTCTTCTATCACCTCTTTCGTTCTGCCATCAGCGCCGTCCAAGAACCCTAGCTTCGCCTCTCCTCACCAGGTACGCACATTATTGTTTGTTCCTTAATATGATATTCAGTTCTTGTTTCGATTTGATTCAACTTGTTTGTTCGTTTACCTCGTATTTTGATTAGGTTTGTTGTTTGTTATTTTCATCTCAGCAAGTCTGTAGCTGCTCCTTGGAAAAGAAAGGCCTCCGATAATGAGGTATGTTAGATTGTTTTAAAACATGAATTTGATTAGTGCTGCAGTTGCTGTTTGTTAAATATGCTGGATTTGTAAATTTCGTCTGTATTGTTTATTCCTGCAAGTAATCTAAATATTTAATTGAGGAAAATTTGGAAGTTTGAAGTTGCAACGTTGGAATTTACTTGGGGCATTAGTTTAGTTGGTTATGGGTTTCTTTGCACTGACTGAATGTTGTTTTGTTTTTTTTGTTGGTTTATATCTGCAGCAAACTTCAGAGTGAAGCGTTGAGAGAAGCCATTTCATCTATCTTCGGTGATAGCAGTGAAAAGAAGCGCAATTTTACTGAGACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGGTCAGTGAAGTTGCCCCACATTCCTCGCCCCAAGATGAAGATTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGTAAACTTTATCTGCTCTTAACCCCGTCACTTGTCATGTCTGCTAACTATTGTCTTTGTTTGTTCTTCCCCGTGGATAGATGGCTAGCTACTTATTCTTTGGTAATATAATGTGGCAAGCTGCGGTCCTCAGTTTTTGAGCATGTTGATGTGGCGCTGTAGTTTGCGTTAGAATTCTAATTGCTACTATGTGTTTAAGAATATATATGAAAATTTTCAACGGTAATGAGATCTGGATAATGTTTATTCTATTTTTGTTTAATATATATGATGCTGAATTCATAGACTTTGTACTTTGTATTGGAAAATAATATACTTACATGGCATTCCATGCATGGTAAATTGAAATCAATGATTGTTGCACTTCACCTCTGTCCTCTTACTTAAATGTGTGGATGCCTTACTATAGGCAGAGAAGATTGGTTTGGATTATATGGATGTGGAGGGTTTGAAGAAGCTTAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAAAAATATCATGCATTTTTAGCATCCGAAGCTGTTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGTCTCAACAAGGCAGGCAAGTGTTCTCATAACTACTAGACATCTGGAATTTATCCTTTTGATCTGGTGACTCAAGTTAGAAAGGTTTTCTTAGTCTTATAGATTGTTTTTTCTTGTGGTGATGCAAGCAAGTGGTATTTGATATTTGGTACTTCATATTCTACTTTCTGTTTAGGCTCATGATGGATTGCATGCTTGTAAATTGAATTACTATCTTTTCTTTTGAAGAAGCTGTTTTGTTTTGCACAACTCACACTTGTAAACTTTACATTTGTAGTTCTTACTAACATTGACATCAACATTGTCATTACAGGTAAGTTCCCTACCCTGGTTACTCACCAAGAATCCCTTGAGTCTAAAGTCAACGAGACAAAGGCAATGGTTAAATTTCAGCTGAAGAAGGTTCTTTGCATGGGTGTTGCCGTTGGTAACGTTGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAGAAGAACTGGCAAAACGTAAGCGACGGGCCTTACTTTTCCACCATGGTCATTTTAGTTCTCTGTTTTCCATTTATACACTGAGCATTCTCGAAGGTTTGTCTTATTTTATAATGGAGAATAATGATATTTGGATATTTTTTGTTCATCAGGTGAGATGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGAGTCTTCTGAGGAATTTTCAAAATTTTCAGATAGCACTGTTTGCTCTTTAATTGAAGAAGAACCAGGTTGAGATGAAATTCTATATTTATGATTGATGAAAAATTTTCTTGTTTTGTTTTGTTTTTTTTTTGTCTAGCACAGTAAACCACTAGCTACACAATCGTTAACACTTATGATGGGGTAATGTTTTTATTTTCCTTTTTGTTTC

mRNA sequence

CTTCGATAATAAAGATTTGTCACCGCTCTTCTATCACCTCTTTCGTTCTGCCATCAGCGCCGTCCAAGAACCCTAGCTTCGCCTCTCCTCACCAGCAAGTCTGTAGCTGCTCCTTGGAAAAGAAAGGCCTCCGATAATGAGCAAACTTCAGAGTGAAGCGTTGAGAGAAGCCATTTCATCTATCTTCGGTGATAGCAGTGAAAAGAAGCGCAATTTTACTGAGACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGGTCAGTGAAGTTGCCCCACATTCCTCGCCCCAAGATGAAGATTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGCAGAGAAGATTGGTTTGGATTATATGGATGTGGAGGGTTTGAAGAAGCTTAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAAAAATATCATGCATTTTTAGCATCCGAAGCTGTTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGTCTCAACAAGGCAGGTAAGTTCCCTACCCTGGTTACTCACCAAGAATCCCTTGAGTCTAAAGTCAACGAGACAAAGGCAATGGTTAAATTTCAGCTGAAGAAGGTTCTTTGCATGGGTGTTGCCGTTGGTAACGTTGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAGAAGAACTGGCAAAACGTGAGATGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGAGTCTTCTGAGGAATTTTCAAAATTTTCAGATAGCACTGTTTGCTCTTTAATTGAAGAAGAACCAGGTTGAGATGAAATTCTATATTTATGATTGATGAAAAATTTTCTTGTTTTGTTTTGTTTTTTTTTTGTCTAGCACAGTAAACCACTAGCTACACAATCGTTAACACTTATGATGGGGTAATGTTTTTATTTTCCTTTTTGTTTC

Coding sequence (CDS)

ATGAGCAAACTTCAGAGTGAAGCGTTGAGAGAAGCCATTTCATCTATCTTCGGTGATAGCAGTGAAAAGAAGCGCAATTTTACTGAGACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGGTCAGTGAAGTTGCCCCACATTCCTCGCCCCAAGATGAAGATTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGCAGAGAAGATTGGTTTGGATTATATGGATGTGGAGGGTTTGAAGAAGCTTAACAAGAACAAGAAGTTGGTGAAGAAACTTGCCAAAAAATATCATGCATTTTTAGCATCCGAAGCTGTTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGTCTCAACAAGGCAGGTAAGTTCCCTACCCTGGTTACTCACCAAGAATCCCTTGAGTCTAAAGTCAACGAGACAAAGGCAATGGTTAAATTTCAGCTGAAGAAGGTTCTTTGCATGGGTGTTGCCGTTGGTAACGTTGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTTGTTTCCTTGTTGAAGAAGAACTGGCAAAACGTGAGATGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGAGTCTTCTGA

Protein sequence

MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF

Homology

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BLAST of Tan0016135 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.4e-105
Identity = 192/216 (88.89%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSE L+EAIS + G+S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Tan0016135 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.4e-105
Identity = 192/216 (88.89%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSE L+EAIS + G+S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Tan0016135 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 6.0e-104
Identity = 193/216 (89.35%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I G S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Tan0016135 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.1e-103
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I G S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Tan0016135 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.5e-102
Identity = 194/217 (89.40%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

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BLAST of Tan0016135 vs. NCBI nr
Match: XP_022943718.1 (60S ribosomal protein L10a [Cucurbita moschata] >XP_022943719.1 60S ribosomal protein L10a [Cucurbita moschata] >XP_022985885.1 60S ribosomal protein L10a [Cucurbita maxima] >XP_022985886.1 60S ribosomal protein L10a [Cucurbita maxima] >XP_023513214.1 60S ribosomal protein L10a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Tan0016135 vs. NCBI nr
Match: XP_022958674.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023532799.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFGDS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIG+DYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Tan0016135 vs. NCBI nr
Match: KAG6570486.1 (Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 115 MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 174

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 175 KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 234

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 235 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 294

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 215
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 295 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 328

[Close]

BLAST of Tan0016135 vs. NCBI nr
Match: XP_022945884.1 (60S ribosomal protein L10a [Cucurbita moschata] >XP_023541044.1 60S ribosomal protein L10a [Cucurbita pepo subsp. pepo] >KAG6573621.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012702.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIF DS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Tan0016135 vs. NCBI nr
Match: XP_022967120.1 (60S ribosomal protein L10a [Cucurbita maxima])

HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 211/216 (97.69%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIF DS++KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNDKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Tan0016135 vs. ExPASy TrEMBL
Match: A0A6J1JCI3 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.7e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Tan0016135 vs. ExPASy TrEMBL
Match: A0A6J1FXB0 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111448383 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.7e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Tan0016135 vs. ExPASy TrEMBL
Match: A0A6J1K725 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111490772 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.6e-113
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFGDS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIG+DYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Tan0016135 vs. ExPASy TrEMBL
Match: A0A6J1H5S7 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111459828 PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 5.6e-113
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIFGDS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFGDSTEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIG+DYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Tan0016135 vs. ExPASy TrEMBL
Match: A0A6J1G271 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111449992 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.2e-112
Identity = 212/216 (98.15%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEALREAISSIF DS+EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Tan0016135 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 378.3 bits (970), Expect = 4.3e-105
Identity = 193/216 (89.35%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I G S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Tan0016135 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 375.2 bits (962), Expect = 3.6e-104
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I G S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Tan0016135 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 375.2 bits (962), Expect = 3.6e-104
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I G S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Tan0016135 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 372.9 bits (956), Expect = 1.8e-103
Identity = 194/217 (89.40%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Tan0016135 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 372.9 bits (956), Expect = 1.8e-103
Identity = 194/217 (89.40%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSKLQSEALREAISSIFGDSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

The following BLAST results are available for this feature:

BLAST of Tan0016135 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	2.4e-105	88.89	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	2.4e-105	88.89	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
Q8VZB9	6.0e-104	89.35	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59230	5.1e-103	88.43	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]
P59231	2.5e-102	89.40	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]

BLAST of Tan0016135 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943718.1	1.8e-113	100.00	60S ribosomal protein L10a [Cucurbita moschata] >XP_022943719.1 60S ribosomal pr...	[more]
XP_022958674.1	1.2e-112	98.61	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022995143.1 60S ribosom...	[more]
KAG6570486.1	2.6e-112	100.00	Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022945884.1	1.3e-111	98.15	60S ribosomal protein L10a [Cucurbita moschata] >XP_023541044.1 60S ribosomal pr...	[more]
XP_022967120.1	2.9e-111	97.69	60S ribosomal protein L10a [Cucurbita maxima]	[more]

BLAST of Tan0016135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCI3	8.7e-114	100.00	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1	[more]
A0A6J1FXB0	8.7e-114	100.00	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111448383 PE=3 SV=1	[more]
A0A6J1K725	5.6e-113	98.61	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111490772 PE=3 SV=1	[more]
A0A6J1H5S7	5.6e-113	98.61	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111459828 PE=3 SV=1	[more]
A0A6J1G271	6.2e-112	98.15	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111449992 PE=3 SV=1	[more]

BLAST of Tan0016135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08360.1	4.3e-105	89.35	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	3.6e-104	88.43	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	3.6e-104	88.43	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	1.8e-103	89.40	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	1.8e-103	89.40	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 65..154 e-value: 3.1E-61 score: 208.3
IPR002143	Ribosomal protein L1	PIRSF	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..216 e-value: 2.9E-48 score: 162.1
None	No IPR available	GENE3D	3.30.190.20		coord: 20..211 e-value: 3.1E-61 score: 208.3
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 2..214
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..214
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 23..210 e-value: 2.7E-43 score: 148.1
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 9..215 e-value: 6.97667E-63 score: 192.784
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 116..135
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 22..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016135.1	Tan0016135.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome