Tan0016091 (gene) Snake gourd v1

Overview


Name	Tan0016091
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Photosystem I reaction centre subunit N
Location	LG02: 15614369 .. 15617208 (-)
RNA-Seq Expression	Tan0016091
Synteny	Tan0016091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAATAGAGCTCTATGGACCAAGAAAGCCTCATCTCTTCTTCAACCTCATCCTCATCTTCAGACTGAAAACTGTCACTCCGATGAGTTCCATCGGGCAAAGCATTCTGATGGCTCTCGCCGTCACTCTCAATAAATTCGCTTCCTCAAACGTTCAATCCGTTCAGAGAAACCAACCCAAAAGCTCACCCACCGCCACCGCCTCCGGTTCTGAAATCGGAAGAAGAGCCCTCCTCTTGTCCGCCGTTGGTGCCGCCGCCGCTGCCGCTCCTGAAGAACCCGTCGACTCCAGAACCGAGCTGCTAAAAAGTGTGCTGCATTTTCTCTCTGTTTTTCTTTCTGTTTTTTTTTCCAATCTTTTCTGTTTTTGGGAATCGTTATTGCTTTCTTAAATTGAAGCAGTGTTAAGACAATTTTTTCTTTTTTAAATTTTGATTTTAGCTGTATGCTATATGATTTTTTTAAAAGAAAAATATATGCTATGCGATTTTTGTCTAACTGTATTTTGTACCATTTTAGAAATCAATTTCTTGAAAGTTTTAAATGAGCTACACATCATCATGAAAAATCATATGGTACGAGATTTACAATTTTATACGCTGTATTTTAATTTTTTTAAAAATATATTTATTTAAATAAATAGTTTTATTGAGTAATGTTATTTTTCAAAATGTTTGTAAATATTACTGTTTATTAAAATAAAAATTATTAGTAATTTTTTTAGTTAAAAAAAGATTTATAATGGATTGGGAGATTCAAACCACAAACCTCGTGCGTGGTCATTAACAAACTCGTTATGTCAGTTAGCTATGCTCTATTTGACTTTTTTTTTTAATTTAACATTGAATTATGAATTCTTCTTATTTATGCTTCACTTGTGCTCTAATGCTTGACTTTCCTTTCCATCTAAATATTTTTTTTTTGTATTAGGGTACCTAAAGAAGTCCGAAGAAAACAAAGAAAAGAATGACAAGGAGGTAAAATTTTATATGTTACTAATGTCTTTTCTACAAGTAGAAAAATTAGGGAAAATACCTTTTGATCTTTATACAGTGGACTTTGTTTCATTTTAGTCTCTATATTTTTAAATATTCTATTTTAGTCGTTGTTTTTTCAATAAAACTCAAAATTAATCCCTACAACTAGTTCATTGTTAATTTTCATAAAAAAATTATTTTCTAGTAGCTTTCTCTTTATAAATTTTGGAAATATGTTCGCATTGTGTCTTTTCTTGTATTAAAATTATTATTTAACCAATTTTGATAAAAATTAACTTCAAACTTATCATATGGACCAATTTTAAGTTTTATTGAAAACTAAAATTAGACATTCAAAAGTATTGAGACTAAGATAAAACAAAGCTTAAAATATAGAGAACAATACTATATTTTAGCTAAAAATTATTTTGTGTGCGATGTAGCTATTACTCTTATATTTGTTAGACATATGAAGAAGAAATATTTTAAAATTTCTCCCTCGAACATCTAATTATTTACAAAAACAATTTGAAATTTCAACAGAGATTGGAGAGCTACTACAAGCGAAATTACAAAGATTATTTTGAGTTTGTTGAAGGATCTTTGAAGAATAAGGCTGAACTTTCTGACTCTGAGAAAGGTATTATTGAGTGGCTTAAGCGAAACAAATAAAATTGATCATCTTTTTTCATATTCATTCAGTTAATTCATCTATCAGTTTCTTCTATTACATCAATTAATTACAACAATAGTTTTAATCTAGGTTGGCTTGGTAATAATTTTATTTTTAGTTTTATGATTTTGAAAACTAAGTTTGTGTAGTGTGATAATTTGTTTTTGAAATGAAATGTAAAAACTACATCTGAATTATTGGGGTTAATCACACATTTGATCTTTTCATTTGAGCCCTTATCTCTCAAGTTTTTCTTAAAGAAAAAAGGGTTAAATTACAAGTTTAGTCCCTAAAATTTCAAGGTTGTATCTATTTGGTCCCTAAACTTTGAAAAGCATCAAATAGGTACATGAACTTTCAAGTTTATACCTAATAAGTCTCTGAACTCTTAAATGTGTCTACTAAGTTATTCAACTTTCAATTTTATGTTTAATAGGTTCTTGAGTTTTCAATTTTGTGTCCACAAGCCATTGACCAAGTTGACATTTTTAAAATTTATAAACTTACTGAACACAAAATTGAAAGTTCAAATTTGACACTTTTAAAGTTCATACACCAAATAGACACAAACTTGAATGTTCAGGGACTAAACTTGTATTTAACCTATAACCCTCTCGAAATTGCTTAGTAATGTAACATTTATATTCCGTTTGGTAACCATTGGTTTTTTGTTTTTGGGTTTTTAGAAATTATGCTTGTTTTTCTACAATTTAATTTCCTTCCTCTTCTCTAGAATGATTTCCATCTTTTTTGTGGTACCACTTAAATTTCTAGCCAATTTTTTTTTTAAAAAATAAAGTTTTTGAAAACTATTTTTTTTTAGTTTTCAAAACTTAGCTTGGTTTTTTTAAAATATATAGGTACAAAGTAGATAAGAAAACATAAAACCACATTGGTAAAAGTGGTGTTTTTAGGCTTTATTTTTAAAAAACCAAAAACTAAAAACAAAATGGTTATCAAATGGGGCTTTAATTACTAAGATTTCATAATTATTCAAATCAAACAGTAATAACAACTTCCATGGTTTTTGTAATTTTATTTTTGTACTGTCAGTGAATTACTAGTTTTTGAAAATTATTACGATAAAATACCATTTTGGTCTCTGTACTTTAAACAGTGTTCTATTTTTGTCTCTATATTTTCAAATGTCCAATTTTAGTTTCTGTACTTTTAATAAATCTTAAAACTGG

mRNA sequence

CTTTAATAGAGCTCTATGGACCAAGAAAGCCTCATCTCTTCTTCAACCTCATCCTCATCTTCAGACTGAAAACTGTCACTCCGATGAGTTCCATCGGGCAAAGCATTCTGATGGCTCTCGCCGTCACTCTCAATAAATTCGCTTCCTCAAACGTTCAATCCGTTCAGAGAAACCAACCCAAAAGCTCACCCACCGCCACCGCCTCCGGTTCTGAAATCGGAAGAAGAGCCCTCCTCTTGTCCGCCGTTGGTGCCGCCGCCGCTGCCGCTCCTGAAGAACCCGTCGACTCCAGAACCGAGCTGCTAAAAAGGTACCTAAAGAAGTCCGAAGAAAACAAAGAAAAGAATGACAAGGAGAGATTGGAGAGCTACTACAAGCGAAATTACAAAGATTATTTTGAGTTTGTTGAAGGATCTTTGAAGAATAAGGCTGAACTTTCTGACTCTGAGAAAGGTATTATTGAGTGGCTTAAGCGAAACAAATAAAATTGATCATCTTTTTTCATATTCATTCAGTTAATTCATCTATCAGTTTCTTCTATTACATCAATTAATTACAACAATAGTTTTAATCTAGGTTGGCTTGGTAATAATTTTATTTTTAGTTTTATGATTTTGAAAACTAAGTTTGTGTAGTGTGATAATTTGTTTTTGAAATGAAATGTAAAAACTACATCTGAATTATTGGGGTTAATCACACATTTGATCTTTTCATTTGAGCCCTTATCTCTCAAGTTTTTCTTAAAGAAAAAAGGGTTAAATTACAAGTTTAGTCCCTAAAATTTCAAGGTTGTATCTATTTGGTCCCTAAACTTTGAAAAGCATCAAATAGGTACATGAACTTTCAAGTTTATACCTAATAAGTCTCTGAACTCTTAAATGTGTCTACTAAGTTATTCAACTTTCAATTTTATGTTTAATAGGTTCTTGAGTTTTCAATTTTGTGTCCACAAGCCATTGACCAAGTTGACATTTTTAAAATTTATAAACTTACTGAACACAAAATTGAAAGTTCAAATTTGACACTTTTAAAGTTCATACACCAAATAGACACAAACTTGAATGTTCAGGGACTAAACTTGTATTTAACCTATAACCCTCTCGAAATTGCTTAGTAATGTAACATTTATATTCCGTTTGGTAACCATTGGTTTTTTGTTTTTGGGTTTTTAGAAATTATGCTTGTTTTTCTACAATTTAATTTCCTTCCTCTTCTCTAGAATGATTTCCATCTTTTTTGTGGTACCACTTAAATTTCTAGCCAATTTTTTTTTTAAAAAATAAAGTTTTTGAAAACTATTTTTTTTTAGTTTTCAAAACTTAGCTTGGTTTTTTTAAAATATATAGGTACAAAGTAGATAAGAAAACATAAAACCACATTGGTAAAAGTGGTGTTTTTAGGCTTTATTTTTAAAAAACCAAAAACTAAAAACAAAATGGTTATCAAATGGGGCTTTAATTACTAAGATTTCATAATTATTCAAATCAAACAGTAATAACAACTTCCATGGTTTTTGTAATTTTATTTTTGTACTGTCAGTGAATTACTAGTTTTTGAAAATTATTACGATAAAATACCATTTTGGTCTCTGTACTTTAAACAGTGTTCTATTTTTGTCTCTATATTTTCAAATGTCCAATTTTAGTTTCTGTACTTTTAATAAATCTTAAAACTGG

Coding sequence (CDS)

ATGAGTTCCATCGGGCAAAGCATTCTGATGGCTCTCGCCGTCACTCTCAATAAATTCGCTTCCTCAAACGTTCAATCCGTTCAGAGAAACCAACCCAAAAGCTCACCCACCGCCACCGCCTCCGGTTCTGAAATCGGAAGAAGAGCCCTCCTCTTGTCCGCCGTTGGTGCCGCCGCCGCTGCCGCTCCTGAAGAACCCGTCGACTCCAGAACCGAGCTGCTAAAAAGGTACCTAAAGAAGTCCGAAGAAAACAAAGAAAAGAATGACAAGGAGAGATTGGAGAGCTACTACAAGCGAAATTACAAAGATTATTTTGAGTTTGTTGAAGGATCTTTGAAGAATAAGGCTGAACTTTCTGACTCTGAGAAAGGTATTATTGAGTGGCTTAAGCGAAACAAATAA

Protein sequence

MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATASGSEIGRRALLLSAVGAAAAAAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNKAELSDSEKGIIEWLKRNK

Homology

[Close]

BLAST of Tan0016091 vs. NCBI nr
Match: XP_038887440.1 (uncharacterized protein LOC120077574 [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 6.2e-48
Identity = 118/134 (88.06%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATA-SGSEIGRRALLLSAVGAAA 60
           MSSIGQSILMALAVTLNKFASSNVQSVQRNQ     TATA +GS IGRR LLLSAV AAA
Sbjct: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQANKPRTATATTGSTIGRRGLLLSAV-AAA 60

Query: 61  AAAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNKAELS 120
           AA PEE VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGS+KNK ELS
Sbjct: 61  AATPEEAVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELS 120

Query: 121 DSEKGIIEWLKRNK 134
           ++EKGIIEWLKRNK
Sbjct: 121 EAEKGIIEWLKRNK 133

[Close]

BLAST of Tan0016091 vs. NCBI nr
Match: XP_008455049.1 (PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 7.8e-43
Identity = 109/133 (81.95%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATASGSEIGRRALLLSAVGAAAA 60
           MSSIGQSILMALAVTLNKFASSNVQSVQRN+     TAT S S IGRR LLLS V  A+ 
Sbjct: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNK----ATATVS-SPIGRRDLLLSTVAPAST 60

Query: 61  AAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNKAELSD 120
           AA    VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGS+KNK ELS+
Sbjct: 61  AAAAAAVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSE 120

Query: 121 SEKGIIEWLKRNK 134
           +EKGI+EWLKRNK
Sbjct: 121 AEKGIVEWLKRNK 128

[Close]

BLAST of Tan0016091 vs. NCBI nr
Match: XP_022989008.1 (uncharacterized protein LOC111486201 [Cucurbita maxima])

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42
Identity = 107/135 (79.26%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPT--ATASGSEIGRRALLLSAVGAA 60
           MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+PK+ PT   T++ S+I RR LLLSA  AA
Sbjct: 1   MSSIGQNILMALALTLNQFASSNVQSVQRNKPKTPPTTATTSASSDIQRRGLLLSAAVAA 60

Query: 61  AAAAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNKAEL 120
           A       VDSRTELLKRYLKKSEENKEKNDKERLES+YKRNYKDYFEFVEGSLKNK EL
Sbjct: 61  A-------VDSRTELLKRYLKKSEENKEKNDKERLESFYKRNYKDYFEFVEGSLKNKDEL 120

Query: 121 SDSEKGIIEWLKRNK 134
           S++EKGIIEWLKRNK
Sbjct: 121 SEAEKGIIEWLKRNK 128

[Close]

BLAST of Tan0016091 vs. NCBI nr
Match: XP_022927848.1 (uncharacterized protein LOC111434615 [Cucurbita moschata])

HSP 1 Score: 182.6 bits (462), Expect = 2.3e-42
Identity = 108/140 (77.14%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATA-------SGSEIGRRALLLS 60
           MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+PK+ PT TA       + S+I RR LLLS
Sbjct: 1   MSSIGQNILMALALTLNQFASSNVQSVQRNKPKTPPTTTATTSASTSASSDIQRRGLLLS 60

Query: 61  AVGAAAAAAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLK 120
           A  AAA       VDSRTELLKRYLKKSEENKEKNDKERLES+YKRNYKDYFEFVEGSLK
Sbjct: 61  AAVAAA-------VDSRTELLKRYLKKSEENKEKNDKERLESFYKRNYKDYFEFVEGSLK 120

Query: 121 NKAELSDSEKGIIEWLKRNK 134
           NK ELS++EKGIIEWLKRNK
Sbjct: 121 NKDELSEAEKGIIEWLKRNK 133

[Close]

BLAST of Tan0016091 vs. NCBI nr
Match: XP_023531124.1 (uncharacterized protein LOC111793462 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.6 bits (462), Expect = 2.3e-42
Identity = 108/140 (77.14%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATA-------SGSEIGRRALLLS 60
           MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+PK+ PT TA       + S+I RR LLLS
Sbjct: 1   MSSIGQNILMALALTLNQFASSNVQSVQRNKPKTPPTTTATTSASTFASSDIQRRGLLLS 60

Query: 61  AVGAAAAAAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLK 120
           A  AAA       VDSRTELLKRYLKKSEENKEKNDKERLES+YKRNYKDYFEFVEGSLK
Sbjct: 61  AAVAAA-------VDSRTELLKRYLKKSEENKEKNDKERLESFYKRNYKDYFEFVEGSLK 120

Query: 121 NKAELSDSEKGIIEWLKRNK 134
           NK ELS++EKGIIEWLKRNK
Sbjct: 121 NKDELSEAEKGIIEWLKRNK 133

[Close]

BLAST of Tan0016091 vs. ExPASy TrEMBL
Match: A0A1S3C176 (uncharacterized protein LOC103495319 OS=Cucumis melo OX=3656 GN=LOC103495319 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.8e-43
Identity = 109/133 (81.95%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATASGSEIGRRALLLSAVGAAAA 60
           MSSIGQSILMALAVTLNKFASSNVQSVQRN+     TAT S S IGRR LLLS V  A+ 
Sbjct: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNK----ATATVS-SPIGRRDLLLSTVAPAST 60

Query: 61  AAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNKAELSD 120
           AA    VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGS+KNK ELS+
Sbjct: 61  AAAAAAVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNKNELSE 120

Query: 121 SEKGIIEWLKRNK 134
           +EKGI+EWLKRNK
Sbjct: 121 AEKGIVEWLKRNK 128

[Close]

BLAST of Tan0016091 vs. ExPASy TrEMBL
Match: A0A6J1JNZ7 (uncharacterized protein LOC111486201 OS=Cucurbita maxima OX=3661 GN=LOC111486201 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.4e-43
Identity = 107/135 (79.26%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPT--ATASGSEIGRRALLLSAVGAA 60
           MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+PK+ PT   T++ S+I RR LLLSA  AA
Sbjct: 1   MSSIGQNILMALALTLNQFASSNVQSVQRNKPKTPPTTATTSASSDIQRRGLLLSAAVAA 60

Query: 61  AAAAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNKAEL 120
           A       VDSRTELLKRYLKKSEENKEKNDKERLES+YKRNYKDYFEFVEGSLKNK EL
Sbjct: 61  A-------VDSRTELLKRYLKKSEENKEKNDKERLESFYKRNYKDYFEFVEGSLKNKDEL 120

Query: 121 SDSEKGIIEWLKRNK 134
           S++EKGIIEWLKRNK
Sbjct: 121 SEAEKGIIEWLKRNK 128

[Close]

BLAST of Tan0016091 vs. ExPASy TrEMBL
Match: A0A6J1EM63 (uncharacterized protein LOC111434615 OS=Cucurbita moschata OX=3662 GN=LOC111434615 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 108/140 (77.14%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATA-------SGSEIGRRALLLS 60
           MSSIGQ+ILMALA+TLN+FASSNVQSVQRN+PK+ PT TA       + S+I RR LLLS
Sbjct: 1   MSSIGQNILMALALTLNQFASSNVQSVQRNKPKTPPTTTATTSASTSASSDIQRRGLLLS 60

Query: 61  AVGAAAAAAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLK 120
           A  AAA       VDSRTELLKRYLKKSEENKEKNDKERLES+YKRNYKDYFEFVEGSLK
Sbjct: 61  AAVAAA-------VDSRTELLKRYLKKSEENKEKNDKERLESFYKRNYKDYFEFVEGSLK 120

Query: 121 NKAELSDSEKGIIEWLKRNK 134
           NK ELS++EKGIIEWLKRNK
Sbjct: 121 NKDELSEAEKGIIEWLKRNK 133

[Close]

BLAST of Tan0016091 vs. ExPASy TrEMBL
Match: A0A6J1D574 (uncharacterized protein LOC111017388 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017388 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 103/133 (77.44%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATASGSEIGRRALLLSAVGAAAA 60
           MSSIGQSILMALAVT+NKFASSNVQSV RNQ     +A A+ S+IGRR LL SAV AA A
Sbjct: 1   MSSIGQSILMALAVTVNKFASSNVQSVHRNQ-----SAAAAASDIGRRGLLFSAVAAAVA 60

Query: 61  AAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNKAELSD 120
                PVDSRTELLKRYLKKSE+NKEKNDKERL+SYYKRNYKDYFEFVEGS++NK+ELS+
Sbjct: 61  -----PVDSRTELLKRYLKKSEQNKEKNDKERLDSYYKRNYKDYFEFVEGSVRNKSELSE 120

Query: 121 SEKGIIEWLKRNK 134
           +EK IIEWL+RNK
Sbjct: 121 TEKDIIEWLRRNK 123

[Close]

BLAST of Tan0016091 vs. ExPASy TrEMBL
Match: A0A6A1UJ56 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007774 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.4e-34
Identity = 93/135 (68.89%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQ-PKSSPTATASGSEIGRRALLLSAVGAAA 60
           MSS+GQSILMAL VT+N+FASSNVQ+V R +  K++ T T + S+IGRR LLLS V    
Sbjct: 1   MSSMGQSILMALTVTVNRFASSNVQAVHRRESKKTTTTTTTTTSDIGRRGLLLSTV---V 60

Query: 61  AAAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNK-AEL 120
           AAAP+ P DSR ELLK+Y KKS+ENK KNDKERL+SYYKRNYKDYFEFVEGSLK K  +L
Sbjct: 61  AAAPQVP-DSRNELLKQYQKKSDENKAKNDKERLDSYYKRNYKDYFEFVEGSLKGKEGQL 120

Query: 121 SDSEKGIIEWLKRNK 134
           S+SEKGI++WL+ NK
Sbjct: 121 SESEKGILDWLRSNK 131

[Close]

BLAST of Tan0016091 vs. TAIR 10
Match: AT1G49975.1 (INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 2.7e-33
Identity = 85/135 (62.96%), Postives = 105/135 (77.78%), Query Frame = 0


Query: 1   MSSIGQSILMALAVTLNKFASSNVQSVQRNQPKSSPTATASGSEIGRRALLLSAVGAAAA 60
           MSSI QSILMAL VT+NK+ASSNVQ+V+RN  K   + TA  +++GRR +L S+    AA
Sbjct: 1   MSSISQSILMALTVTVNKYASSNVQAVRRNDTKRH-SLTAPPADLGRRNILFSSTSFIAA 60

Query: 61  AAPEEPVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSLKNK--AEL 120
           A     + S  +LL++YLKK+EENK KNDKERL+S+YKRNYKDYFEFVEGS+K K  AEL
Sbjct: 61  A-----LTSSDQLLQKYLKKTEENKAKNDKERLDSFYKRNYKDYFEFVEGSIKGKTEAEL 120

Query: 121 SDSEKGIIEWLKRNK 134
           S+SEK I+EWLK NK
Sbjct: 121 SESEKRILEWLKANK 129

The following BLAST results are available for this feature:

BLAST of Tan0016091 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0016091 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887440.1	6.2e-48	88.06	uncharacterized protein LOC120077574 [Benincasa hispida]	[more]
XP_008455049.1	7.8e-43	81.95	PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]	[more]
XP_022989008.1	1.3e-42	79.26	uncharacterized protein LOC111486201 [Cucurbita maxima]	[more]
XP_022927848.1	2.3e-42	77.14	uncharacterized protein LOC111434615 [Cucurbita moschata]	[more]
XP_023531124.1	2.3e-42	77.14	uncharacterized protein LOC111793462 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0016091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C176	3.8e-43	81.95	uncharacterized protein LOC103495319 OS=Cucumis melo OX=3656 GN=LOC103495319 PE=...	[more]
A0A6J1JNZ7	6.4e-43	79.26	uncharacterized protein LOC111486201 OS=Cucurbita maxima OX=3661 GN=LOC111486201...	[more]
A0A6J1EM63	1.1e-42	77.14	uncharacterized protein LOC111434615 OS=Cucurbita moschata OX=3662 GN=LOC1114346...	[more]
A0A6J1D574	1.6e-41	77.44	uncharacterized protein LOC111017388 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6A1UJ56	1.4e-34	68.89	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007774 PE=3 SV=1	[more]

BLAST of Tan0016091 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49975.1	2.7e-33	62.96	INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid m...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 74..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..42
None	No IPR available	PANTHER	PTHR36327	UNNAMED PRODUCT	coord: 13..133
IPR008796	Photosystem I reaction centre subunit N, chloroplastic	PFAM	PF05479	PsaN	coord: 28..96 e-value: 2.0E-6 score: 28.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016091.1	Tan0016091.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009522	photosystem I