Tan0016064 (gene) Snake gourd v1

Overview
NameTan0016064
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Description30S ribosomal protein S5
LocationLG03: 78292933 .. 78295191 (-)
RNA-Seq ExpressionTan0016064
SyntenyTan0016064
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCCATTTATCCAGAACATACTGAACGACGTCGTGAAGACTTTCTTCGCCTTACCCGTGTAGAGTCCATTGGGGATAAGCATAAGCTTCCTCCTCCATCTCTGAACCCACAAACCTTCCCTCTCAATCCTTCCTTCTTTCAATGGCTTCTTCAACTCTCGTCCCCATTTCCTCTCTTTCCTTACGCTCTTCTCCCTCTCATCGCCTCCCAATTCCTCCTTTGAAGCCTTTCACCGTCCTCCACTCCGCCCTATCCATTGCCCCTATTTCTTCCTCCTCCTCTTCGATTCTCTCTGCAACTCGAGCCAAATCCTCAGACATCGACACCACCTTCTTCGACACCGTCAATCCCGAAGAAGACGTTGTTTACGACCCCCCTGAAGTCCCCGAAGGCTTCGTCGCCCCTCCCTCCTTCGACGAGGGCCCATTAGAATCCGAGGACGAAATTGCCGCAGCTTACGAGGAGATCTATGGCCCTGCTTACAGTGGAATCAGTGTTCTAGGAAATGACATTTATGTAATGGATTCTAAGGTTAAGAAAGTGGGCGGATTGGGCTCAAAGGTCAAGAAGGACAAGCCGCGGGATGGGTTTGAAGAGAGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTCGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTGGGTGATAAACAGGGCCAAGTCGGTGTTGGTGTTGGCAAAGCTAAGGAGGTCATCGCCGCTGTCCAGAAATCGGCGGTCAATGCTCGCCGGAACATTGTCACCGTTCCCATGACCAAGTACCTGACATTTCCCCACAGGTTCGTGAGTTTGTTTTCGAGTTTTGCAATTCCAATTTCAGTTTAGTTTGGGCGATGTTTTATAGTACCAATAGGAGTTTCTGCAGTAGCCTTATTGTAATGCTTTAGTTTGCTGATAATGGGAATGCCTTCAATTAGGAATATGGGATTTAAGGAAGAGTAGAATGGGATGATCACATTGATTTAAAGCACACTTTACTTCACTGCCAATTGATTACTCCAATCCAGTATGTTGTCAGTTTAGTGGATTTTCTATCAACTCCAATCCTTTTTTCAACAGTTCAATGGTTTTGTTTTAAGTTAGTTAATTCAAATTCTGTAGTCTGTTGGCAGTTTGAACTTTGAATCCTCATGAAAGTTGGTCATTTGAGTTATTTATTGATATTGAACTGTTGTTTGTAAATGACAAGGTATGTTTCCCAGTTTAGTCCAGAGTCTGCTACAATTAGAGTATGAAGAACTTGTCTTCTTGACTGAGCTTCCAGTGCTCTTTCTATGGCTGAATGAATTAGTACTTAAAAGGCATCTTGATAGTGAGAGATATATAGAATGCTTTACTTTTAGATGCAAATACAAAGAGTTAATAGTATAGCAGATTCCAGGAAGCGAGAGACCAAAGTAATATAGTTTGAAACTCAATTTTTCTACAAGTAAAAGAAGCTGCAAATTATGAGTGCTAGTAAAGTAATATTTCATTCATATCCACAAATGGCATGTTGGGATGCATTGTGTTACTGTAAATGCTGTGTTACTGTAATGTTGGCTAAGGAGAGTGAGGAAATTGTAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTGAGACCTGCCTCTCCCGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCCTTAGGGAAGCAACTTGGAAGTAACAATGCTCTCAACAATGCCAGAGCGACGGTGGTTGCCGTGCAGAAGATGAAACAGTTTCGGGACGTTGCGCAGGAGCGTGGCATCCCCATGGAAGAGTTGTGGAAGTGAAGAGGGAAAGGGTGAGTTATTTTCTTTTGTCTCATTTTTCCTTCGACGTATATTAGTGAATCTATTCTTGTAACTCGATGTTGTAAAAACGGCAGTCAGGCTTCATTCCTTTGCTTCTTTTTTTTCCCCTTACAACATAGCCTTGAAAAGTTAGTATATTTGTTTGTTGCTTCACTGTGAAGAGGGCTTTTATAACCATTTTAGAATGTTGAAGAACACTGATCTAACTTGGGTGGGGGCAGAATCTGAGATATCTGAAAAAGAAACCATACAACCCAACCCATGTTAAAAGTTTGGGTACTTTCGAATTGAAACTTTAGGAATTTGATCTTTTGGGTTGGATCTTGGGTTGCAAAGTATTGGTGAGCCTGTACGACTAATTTAATTTAGAATATATACTGGATTAAAT

mRNA sequence

TATCCATTTATCCAGAACATACTGAACGACGTCGTGAAGACTTTCTTCGCCTTACCCGTGTAGAGTCCATTGGGGATAAGCATAAGCTTCCTCCTCCATCTCTGAACCCACAAACCTTCCCTCTCAATCCTTCCTTCTTTCAATGGCTTCTTCAACTCTCGTCCCCATTTCCTCTCTTTCCTTACGCTCTTCTCCCTCTCATCGCCTCCCAATTCCTCCTTTGAAGCCTTTCACCGTCCTCCACTCCGCCCTATCCATTGCCCCTATTTCTTCCTCCTCCTCTTCGATTCTCTCTGCAACTCGAGCCAAATCCTCAGACATCGACACCACCTTCTTCGACACCGTCAATCCCGAAGAAGACGTTGTTTACGACCCCCCTGAAGTCCCCGAAGGCTTCGTCGCCCCTCCCTCCTTCGACGAGGGCCCATTAGAATCCGAGGACGAAATTGCCGCAGCTTACGAGGAGATCTATGGCCCTGCTTACAGTGGAATCAGTGTTCTAGGAAATGACATTTATGTAATGGATTCTAAGGTTAAGAAAGTGGGCGGATTGGGCTCAAAGGTCAAGAAGGACAAGCCGCGGGATGGGTTTGAAGAGAGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTCGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTGGGTGATAAACAGGGCCAAGTCGGTGTTGGTGTTGGCAAAGCTAAGGAGGTCATCGCCGCTGTCCAGAAATCGGCGGTCAATGCTCGCCGGAACATTGTCACCGTTCCCATGACCAAGTACCTGACATTTCCCCACAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTGAGACCTGCCTCTCCCGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCCTTAGGGAAGCAACTTGGAAGTAACAATGCTCTCAACAATGCCAGAGCGACGGTGGTTGCCGTGCAGAAGATGAAACAGTTTCGGGACGTTGCGCAGGAGCGTGGCATCCCCATGGAAGAGTTGTGGAAGTGAAGAGGGAAAGGGTGAGTTATTTTCTTTTGTCTCATTTTTCCTTCGACGTATATTAGTGAATCTATTCTTGTAACTCGATGTTGTAAAAACGGCAGTCAGGCTTCATTCCTTTGCTTCTTTTTTTTCCCCTTACAACATAGCCTTGAAAAGTTAGTATATTTGTTTGTTGCTTCACTGTGAAGAGGGCTTTTATAACCATTTTAGAATGTTGAAGAACACTGATCTAACTTGGGTGGGGGCAGAATCTGAGATATCTGAAAAAGAAACCATACAACCCAACCCATGTTAAAAGTTTGGGTACTTTCGAATTGAAACTTTAGGAATTTGATCTTTTGGGTTGGATCTTGGGTTGCAAAGTATTGGTGAGCCTGTACGACTAATTTAATTTAGAATATATACTGGATTAAAT

Coding sequence (CDS)

ATGGCTTCTTCAACTCTCGTCCCCATTTCCTCTCTTTCCTTACGCTCTTCTCCCTCTCATCGCCTCCCAATTCCTCCTTTGAAGCCTTTCACCGTCCTCCACTCCGCCCTATCCATTGCCCCTATTTCTTCCTCCTCCTCTTCGATTCTCTCTGCAACTCGAGCCAAATCCTCAGACATCGACACCACCTTCTTCGACACCGTCAATCCCGAAGAAGACGTTGTTTACGACCCCCCTGAAGTCCCCGAAGGCTTCGTCGCCCCTCCCTCCTTCGACGAGGGCCCATTAGAATCCGAGGACGAAATTGCCGCAGCTTACGAGGAGATCTATGGCCCTGCTTACAGTGGAATCAGTGTTCTAGGAAATGACATTTATGTAATGGATTCTAAGGTTAAGAAAGTGGGCGGATTGGGCTCAAAGGTCAAGAAGGACAAGCCGCGGGATGGGTTTGAAGAGAGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTCGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTGGGTGATAAACAGGGCCAAGTCGGTGTTGGTGTTGGCAAAGCTAAGGAGGTCATCGCCGCTGTCCAGAAATCGGCGGTCAATGCTCGCCGGAACATTGTCACCGTTCCCATGACCAAGTACCTGACATTTCCCCACAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTGAGACCTGCCTCTCCCGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCCTTAGGGAAGCAACTTGGAAGTAACAATGCTCTCAACAATGCCAGAGCGACGGTGGTTGCCGTGCAGAAGATGAAACAGTTTCGGGACGTTGCGCAGGAGCGTGGCATCCCCATGGAAGAGTTGTGGAAGTGA

Protein sequence

MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPISSSSSSILSATRAKSSDIDTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISVLGNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELWK
Homology
[Close]
BLAST of Tan0016064 vs. ExPASy Swiss-Prot
Match: P93014 (30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 7.4e-108
Identity = 219/306 (71.57%), Postives = 246/306 (80.39%), Query Frame = 0 

Query: 3   SSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPISSSSSSILSATRAKSSDIDT 62
           +S L  +SSLSL +  S  +     K      S +S +   +   S L+  +A S+D +T
Sbjct: 4   ASALSSLSSLSLHTRTSSLISSSSTK------SIVSFSSFLNRRFSSLTLVKASSTDTET 63

Query: 63  TFFDTVNPE--EDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISVL 122
            FF+   PE   +VV+DPP  PEGFV+PP FDEG  E+E+EIA A+EE+YGPAYSG S+L
Sbjct: 64  IFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYGPAYSGESML 123

Query: 123 GNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 182
           G DIYVMDSK KK  G+G K KKDK RDGFEERVVQVRRVTKVVKGGKQL FRAIVVVGD
Sbjct: 124 GKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGD 183

Query: 183 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 242
           KQG VGVG  KAKEV+AAVQKSA++ARRNIV VPMTKY TFPHRSEGDYGAAKVMLRPAS
Sbjct: 184 KQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPAS 243

Query: 243 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIP 302
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQ+M+QFRDVAQERGIP
Sbjct: 244 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGIP 303

Query: 303 MEELWK 307
           MEELWK
Sbjct: 304 MEELWK 303

[Close]
BLAST of Tan0016064 vs. ExPASy Swiss-Prot
Match: Q9ST69 (30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps5 PE=1 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 8.2e-107
Identity = 208/300 (69.33%), Postives = 242/300 (80.67%), Query Frame = 0 

Query: 25  PPLKPFTVLHSALSIAP-------ISSSSSSI---LSATRA--------KSSDIDTTFFD 84
           P     T LH  + + P       +SSSS  +   LS+TR+        K  DID TFF+
Sbjct: 9   PSATSLTTLHRRIPLFPTTTTLLSLSSSSKPLFLSLSSTRSFPTHLYCIKKDDIDITFFE 68

Query: 85  TVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISVLGNDIYV 144
             NP+E++ +DPPE PEG++ P + DE P ESE+EIA AYEE+YG AYSG S+LGND+Y 
Sbjct: 69  QDNPDEEITFDPPEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGESLLGNDVYA 128

Query: 145 MDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVG 204
           MDSK+KK  G GSK KK+K RDGFEE VVQVRRVTKVVKGGK + FRAIVVVGDK+GQVG
Sbjct: 129 MDSKIKKATGFGSKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVVGDKKGQVG 188

Query: 205 VGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVI 264
           VGVGKAKEV++AVQK+AV+ARRNI+TVPMTKYLTFPHR+E DYGAA+VMLRPA+PGTGVI
Sbjct: 189 VGVGKAKEVVSAVQKAAVDARRNIITVPMTKYLTFPHRNEADYGAARVMLRPAAPGTGVI 248

Query: 265 AGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELWK 307
           AGGAVR VLEMAGVENALGKQLGSNNALNNARAT+VAVQ M+QF DVA++RGIPMEELWK
Sbjct: 249 AGGAVRTVLEMAGVENALGKQLGSNNALNNARATIVAVQTMRQFSDVARDRGIPMEELWK 308

[Close]
BLAST of Tan0016064 vs. ExPASy Swiss-Prot
Match: Q1XDJ0 (30S ribosomal protein S5, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rps5 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.6e-48
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 0 

Query: 140 KVKKDKPRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAA 199
           K  K K +D G+EERVVQV+RVTKVVKGGK+L FR I+V+G++QGQVGVGVGKA +VI A
Sbjct: 6   KQSKGKDKDSGWEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGA 65

Query: 200 VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 259
           V+K   +A++++VTVP+TK  + PH   G  GAAKV+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66  VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAKVILRPSAPGSGVIAGGSVRTVLELS 125

Query: 260 GVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW 306
           GV+N L KQLGSNN LNNARA +  + +++ F + A++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIESLY 172

[Close]
BLAST of Tan0016064 vs. ExPASy Swiss-Prot
Match: P51298 (30S ribosomal protein S5, chloroplastic OS=Porphyra purpurea OX=2787 GN=rps5 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-47
Identity = 99/167 (59.28%), Postives = 135/167 (80.84%), Query Frame = 0 

Query: 140 KVKKDKPRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAA 199
           K  K K +D G+EERVVQV+RVTKVVKGGK+L FR I+VVG++QGQVGVGVGKA +VI A
Sbjct: 6   KQGKSKEKDNGWEERVVQVKRVTKVVKGGKKLSFRVILVVGNEQGQVGVGVGKASDVIGA 65

Query: 200 VQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 259
           V+K   +A++++VTVP+TK  + PH   G  GAA+V+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66  VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAQVILRPSAPGSGVIAGGSVRTVLELS 125

Query: 260 GVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW 306
           GV+N L KQLGSNN LNNARA +  + +++ F + A++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIENLY 172

[Close]
BLAST of Tan0016064 vs. ExPASy Swiss-Prot
Match: Q31L23 (30S ribosomal protein S5 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpsE PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.3e-47
Identity = 97/178 (54.49%), Postives = 137/178 (76.97%), Query Frame = 0 

Query: 128 DSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGV 187
           + K KK        ++ +    ++ERVVQ+RRVTKVVKGGK+L FRAIV+VG+++GQVGV
Sbjct: 3   EEKDKKQSSRRRNNRRTEKESEWQERVVQIRRVTKVVKGGKKLSFRAIVIVGNERGQVGV 62

Query: 188 GVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIA 247
           GVGKA +VI AV+K   + ++++V VP+T+  + PH S G+ GAA+V++RPA+PGTGVIA
Sbjct: 63  GVGKASDVIGAVRKGVADGKKHLVNVPLTRDQSIPHPSTGEGGAAQVLIRPAAPGTGVIA 122

Query: 248 GGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIPMEELW 306
           GGAVR VLE+AGV+N L K+LGS + LNNARA + A+  ++ F++VAQ R IP+E+L+
Sbjct: 123 GGAVRTVLELAGVKNVLAKRLGSKSPLNNARAALEALSSLRTFQEVAQSRDIPVEQLY 180

[Close]
BLAST of Tan0016064 vs. NCBI nr
Match: XP_038883765.1 (30S ribosomal protein S5, chloroplastic [Benincasa hispida])

HSP 1 Score: 541.2 bits (1393), Expect = 5.8e-150
Identity = 290/307 (94.46%), Postives = 295/307 (96.09%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPISSSSSS-ILSATRAKSSD 60
           MASSTLVPISSLSLRSSPSHRLPIP  KPFTVLHSA+S+ PISSSSSS ILSAT  KSSD
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPIPLFKPFTVLHSAVSVPPISSSSSSFILSATPPKSSD 60

Query: 61  IDTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISV 120
           IDTTFFD V P+EDVVYDPPEVPEGFV PPSFDEGP ESEDEIAAAYEEIYGPAYSG+SV
Sbjct: 61  IDTTFFDNVTPQEDVVYDPPEVPEGFVPPPSFDEGPPESEDEIAAAYEEIYGPAYSGVSV 120

Query: 121 LGNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDIYVMDSKVKKVGG GSK KKDKPRDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKVGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 301 PMEELWK 307
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]
BLAST of Tan0016064 vs. NCBI nr
Match: XP_022142374.1 (30S ribosomal protein S5, chloroplastic [Momordica charantia])

HSP 1 Score: 533.5 bits (1373), Expect = 1.2e-147
Identity = 285/306 (93.14%), Postives = 295/306 (96.41%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPISSSSSSILSATRAKSSDI 60
           MASSTLVPISSLSLRSSPSHRLPI PLKPFTVLHSALS+API  SSSSIL+  RAKSSDI
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPILPLKPFTVLHSALSLAPI--SSSSILAPIRAKSSDI 60

Query: 61  DTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISVL 120
           DTTFFD V PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EIAAAYEEIYGPAYSG+SVL
Sbjct: 61  DTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVL 120

Query: 121 GNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180
           GNDI+VMDSKVKKVGG GSK KKDK RDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD
Sbjct: 121 GNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180

Query: 181 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 240
           KQGQVGVGVGKAKEVI+AVQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPAS
Sbjct: 181 KQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPAS 240

Query: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIP 300
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGIP
Sbjct: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIP 300

Query: 301 MEELWK 307
           MEELWK
Sbjct: 301 MEELWK 304

[Close]
BLAST of Tan0016064 vs. NCBI nr
Match: XP_004134699.1 (30S ribosomal protein S5, chloroplastic [Cucumis sativus] >XP_011658214.1 30S ribosomal protein S5, chloroplastic [Cucumis sativus] >KAE8647691.1 hypothetical protein Csa_004214 [Cucumis sativus])

HSP 1 Score: 530.8 bits (1366), Expect = 7.8e-147
Identity = 281/307 (91.53%), Postives = 292/307 (95.11%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPI-SSSSSSILSATRAKSSD 60
           MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS + + PI SSSSSSILSATRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSTVFLLPISSSSSSSILSATRAKSSD 60

Query: 61  IDTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISV 120
           IDTTFFD VNP+ED+VYDPPEVPEGFV PPSFDEGP+E+E+EIAA YEEIYGPAYSG+SV
Sbjct: 61  IDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPAYSGVSV 120

Query: 121 LGNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDIYVMDSKVKK GG GSK KKDKPRDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVI AVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 301 PMEELWK 307
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]
BLAST of Tan0016064 vs. NCBI nr
Match: KAA0052681.1 (30S ribosomal protein S5 [Cucumis melo var. makuwa] >TYK13143.1 30S ribosomal protein S5 [Cucumis melo var. makuwa])

HSP 1 Score: 528.5 bits (1360), Expect = 3.9e-146
Identity = 280/307 (91.21%), Postives = 293/307 (95.44%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPI-SSSSSSILSATRAKSSD 60
           MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS +S+  I SSSSSSILSATRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSPVSVLSISSSSSSSILSATRAKSSD 60

Query: 61  IDTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISV 120
           IDTTFFD VNP+ED+ +DPPEVPEGFV PPSFDEGP+E+E+EIAAAYEEIYGPAYSG+SV
Sbjct: 61  IDTTFFDNVNPDEDIAFDPPEVPEGFVPPPSFDEGPMETEEEIAAAYEEIYGPAYSGVSV 120

Query: 121 LGNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDIYVMDSKVKK GG GSK KK+KPRDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKEKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 301 PMEELWK 307
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]
BLAST of Tan0016064 vs. NCBI nr
Match: XP_023544602.1 (30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.9 bits (1356), Expect = 1.1e-145
Identity = 277/306 (90.52%), Postives = 295/306 (96.41%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPISSSSSSILSATRAKSSDI 60
           MASS +VPISSLSLRSSPS+ LPIPPLKPFT+LHSA+S+ PI  SSSSILSA RAK SDI
Sbjct: 1   MASSIIVPISSLSLRSSPSYCLPIPPLKPFTLLHSAVSVPPI--SSSSILSAARAKPSDI 60

Query: 61  DTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISVL 120
           DTTFF+++NPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEE+YGPAYSG+SVL
Sbjct: 61  DTTFFESINPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVL 120

Query: 121 GNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180
           GNDIYVMDSK+KKVGG GSK +K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGD
Sbjct: 121 GNDIYVMDSKMKKVGGFGSKARKEKARDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180

Query: 181 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 240
           K+GQVGVGVGKAKEVI+AVQKSA+NARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS
Sbjct: 181 KKGQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 240

Query: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIP 300
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAV KMKQFRDVA+ERGIP
Sbjct: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVMKMKQFRDVARERGIP 300

Query: 301 MEELWK 307
           MEELWK
Sbjct: 301 MEELWK 304

[Close]
BLAST of Tan0016064 vs. ExPASy TrEMBL
Match: A0A6J1CLD7 (30S ribosomal protein S5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012511 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.8e-148
Identity = 285/306 (93.14%), Postives = 295/306 (96.41%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPISSSSSSILSATRAKSSDI 60
           MASSTLVPISSLSLRSSPSHRLPI PLKPFTVLHSALS+API  SSSSIL+  RAKSSDI
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPILPLKPFTVLHSALSLAPI--SSSSILAPIRAKSSDI 60

Query: 61  DTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISVL 120
           DTTFFD V PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EIAAAYEEIYGPAYSG+SVL
Sbjct: 61  DTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVL 120

Query: 121 GNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180
           GNDI+VMDSKVKKVGG GSK KKDK RDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD
Sbjct: 121 GNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180

Query: 181 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 240
           KQGQVGVGVGKAKEVI+AVQKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPAS
Sbjct: 181 KQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPAS 240

Query: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIP 300
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGIP
Sbjct: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIP 300

Query: 301 MEELWK 307
           MEELWK
Sbjct: 301 MEELWK 304

[Close]
BLAST of Tan0016064 vs. ExPASy TrEMBL
Match: A0A0A0KK69 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517420 PE=3 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.8e-147
Identity = 281/307 (91.53%), Postives = 292/307 (95.11%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPI-SSSSSSILSATRAKSSD 60
           MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS + + PI SSSSSSILSATRAKSSD
Sbjct: 47  MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSTVFLLPISSSSSSSILSATRAKSSD 106

Query: 61  IDTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISV 120
           IDTTFFD VNP+ED+VYDPPEVPEGFV PPSFDEGP+E+E+EIAA YEEIYGPAYSG+SV
Sbjct: 107 IDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPAYSGVSV 166

Query: 121 LGNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDIYVMDSKVKK GG GSK KKDKPRDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 167 LGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 226

Query: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVI AVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 227 DKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 286

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI
Sbjct: 287 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 346

Query: 301 PMEELWK 307
           PMEELWK
Sbjct: 347 PMEELWK 353

[Close]
BLAST of Tan0016064 vs. ExPASy TrEMBL
Match: A0A5D3CMJ7 (30S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007540 PE=3 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.9e-146
Identity = 280/307 (91.21%), Postives = 293/307 (95.44%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPI-SSSSSSILSATRAKSSD 60
           MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS +S+  I SSSSSSILSATRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSPVSVLSISSSSSSSILSATRAKSSD 60

Query: 61  IDTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISV 120
           IDTTFFD VNP+ED+ +DPPEVPEGFV PPSFDEGP+E+E+EIAAAYEEIYGPAYSG+SV
Sbjct: 61  IDTTFFDNVNPDEDIAFDPPEVPEGFVPPPSFDEGPMETEEEIAAAYEEIYGPAYSGVSV 120

Query: 121 LGNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDIYVMDSKVKK GG GSK KK+KPRDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKEKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 301 PMEELWK 307
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]
BLAST of Tan0016064 vs. ExPASy TrEMBL
Match: A0A1S3AZA3 (30S ribosomal protein S5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484514 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 7.1e-146
Identity = 279/307 (90.88%), Postives = 292/307 (95.11%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPI-SSSSSSILSATRAKSSD 60
           MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS +S+  I SSSSSSILSATRAKSSD
Sbjct: 1   MASSTLVPISSISLRSSPSHRLSIPLFKPFPLLHSPVSVLSISSSSSSSILSATRAKSSD 60

Query: 61  IDTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISV 120
            DTTFFD VNP+ED+ +DPPEVPEGFV PPSFDEGP+E+E+EIAAAYEEIYGPAYSG+SV
Sbjct: 61  TDTTFFDNVNPDEDIAFDPPEVPEGFVPPPSFDEGPMETEEEIAAAYEEIYGPAYSGVSV 120

Query: 121 LGNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVG 180
           LGNDIYVMDSKVKK GG GSK KK+KPRDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVG
Sbjct: 121 LGNDIYVMDSKVKKAGGFGSKAKKEKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVG 180

Query: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240
           DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA
Sbjct: 181 DKQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPA 240

Query: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300
           SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI
Sbjct: 241 SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGI 300

Query: 301 PMEELWK 307
           PMEELWK
Sbjct: 301 PMEELWK 307

[Close]
BLAST of Tan0016064 vs. ExPASy TrEMBL
Match: A0A6J1EMC0 (30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433861 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.6e-145
Identity = 277/306 (90.52%), Postives = 292/306 (95.42%), Query Frame = 0 

Query: 1   MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPISSSSSSILSATRAKSSDI 60
           MASSTLVPIS   +RSSP HRLPIP LKPF+ +HSALS+API   SSSILSATR KSSDI
Sbjct: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPI---SSSILSATRVKSSDI 60

Query: 61  DTTFFDTVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISVL 120
           DTTFFDT NP+ED VYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEE+YGPAYSG+SVL
Sbjct: 61  DTTFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVL 120

Query: 121 GNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180
           GNDIYVMDSK+KK+GG GSK+KKDK RDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD
Sbjct: 121 GNDIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 180

Query: 181 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 240
           K+GQVGVGVGKAKEVI+AVQKSA+NARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS
Sbjct: 181 KKGQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 240

Query: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIP 300
           PGTGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATVVAVQKMKQFR+VAQERGIP
Sbjct: 241 PGTGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIP 300

Query: 301 MEELWK 307
           MEELWK
Sbjct: 301 MEELWK 303

[Close]
BLAST of Tan0016064 vs. TAIR 10
Match: AT2G33800.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 391.7 bits (1005), Expect = 5.3e-109
Identity = 219/306 (71.57%), Postives = 246/306 (80.39%), Query Frame = 0 

Query: 3   SSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSIAPISSSSSSILSATRAKSSDIDT 62
           +S L  +SSLSL +  S  +     K      S +S +   +   S L+  +A S+D +T
Sbjct: 4   ASALSSLSSLSLHTRTSSLISSSSTK------SIVSFSSFLNRRFSSLTLVKASSTDTET 63

Query: 63  TFFDTVNPE--EDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEEIYGPAYSGISVL 122
            FF+   PE   +VV+DPP  PEGFV+PP FDEG  E+E+EIA A+EE+YGPAYSG S+L
Sbjct: 64  IFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYGPAYSGESML 123

Query: 123 GNDIYVMDSKVKKVGGLGSKVKKDKPRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGD 182
           G DIYVMDSK KK  G+G K KKDK RDGFEERVVQVRRVTKVVKGGKQL FRAIVVVGD
Sbjct: 124 GKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGD 183

Query: 183 KQGQVGVGVGKAKEVIAAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPAS 242
           KQG VGVG  KAKEV+AAVQKSA++ARRNIV VPMTKY TFPHRSEGDYGAAKVMLRPAS
Sbjct: 184 KQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPAS 243

Query: 243 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERGIP 302
           PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQ+M+QFRDVAQERGIP
Sbjct: 244 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGIP 303

Query: 303 MEELWK 307
           MEELWK
Sbjct: 304 MEELWK 303

[Close]
BLAST of Tan0016064 vs. TAIR 10
Match: AT1G64880.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 79.7 bits (195), Expect = 4.4e-15
Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = 0 

Query: 142 KKDKP--RDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAV 201
           KK +P  R G++  V+ V++V KV KGG+   + A++V G+ +G +G    KA+   +A+
Sbjct: 348 KKRQPLYRKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAM 407

Query: 202 QKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 261
           QK+     +N+  V   +  T  H  +  Y   K+ L PA   TG+ AG  V+ +L +AG
Sbjct: 408 QKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAG 467

Query: 262 VENALGKQLGSNNALNNARATVVAVQKMKQFRDVAQERG 299
            +N   K +GS N+ N  +A + A+  ++  +DV ++ G
Sbjct: 468 FKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFG 506

[Close]
BLAST of Tan0016064 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-12
Identity = 47/148 (31.76%), Postives = 79/148 (53.38%), Query Frame = 0 

Query: 151 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNI 210
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV  A++ + + A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 211 VTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 270
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 271 LGKQLGSNNALNN-ARATVVAVQKMKQF 291
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

[Close]
BLAST of Tan0016064 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-12
Identity = 47/148 (31.76%), Postives = 79/148 (53.38%), Query Frame = 0 

Query: 151 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNI 210
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV  A++ + + A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 211 VTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 270
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 271 LGKQLGSNNALNN-ARATVVAVQKMKQF 291
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

[Close]
BLAST of Tan0016064 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-12
Identity = 47/148 (31.76%), Postives = 79/148 (53.38%), Query Frame = 0 

Query: 151 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNI 210
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV  A++ + + A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 211 VTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 270
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 271 LGKQLGSNNALNN-ARATVVAVQKMKQF 291
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

The following BLAST results are available for this feature:
BLAST of Tan0016064 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P930147.4e-10871.5730S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 ... [more]
Q9ST698.2e-10769.3330S ribosomal protein S5, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps5 PE=... [more]
Q1XDJ06.6e-4859.2830S ribosomal protein S5, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rps5 PE=... [more]
P512981.9e-4759.2830S ribosomal protein S5, chloroplastic OS=Porphyra purpurea OX=2787 GN=rps5 PE=... [more]
Q31L237.3e-4754.4930S ribosomal protein S5 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805... [more]
BLAST of Tan0016064 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883765.15.8e-15094.4630S ribosomal protein S5, chloroplastic [Benincasa hispida][more]
XP_022142374.11.2e-14793.1430S ribosomal protein S5, chloroplastic [Momordica charantia][more]
XP_004134699.17.8e-14791.5330S ribosomal protein S5, chloroplastic [Cucumis sativus] >XP_011658214.1 30S ri... [more]
KAA0052681.13.9e-14691.2130S ribosomal protein S5 [Cucumis melo var. makuwa] >TYK13143.1 30S ribosomal pr... [more]
XP_023544602.11.1e-14590.5230S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
BLAST of Tan0016064 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CLD75.8e-14893.1430S ribosomal protein S5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A0A0KK693.8e-14791.53S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517420 PE=... [more]
A0A5D3CMJ71.9e-14691.2130S ribosomal protein S5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3AZA37.1e-14690.8830S ribosomal protein S5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484514 ... [more]
A0A6J1EMC04.6e-14590.5230S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO... [more]
BLAST of Tan0016064 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G33800.15.3e-10971.57Ribosomal protein S5 family protein [more]
AT1G64880.14.4e-1532.08Ribosomal protein S5 family protein [more]
AT1G58983.14.6e-1231.76Ribosomal protein S5 family protein [more]
AT1G59359.14.6e-1231.76Ribosomal protein S5 family protein [more]
AT1G58380.14.6e-1231.76Ribosomal protein S5 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005324Ribosomal protein S5, C-terminalPFAMPF03719Ribosomal_S5_Ccoord: 227..297
e-value: 2.2E-25
score: 87.9
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 217..305
e-value: 1.5E-27
score: 97.0
IPR013810Ribosomal protein S5, N-terminalPFAMPF00333Ribosomal_S5coord: 150..214
e-value: 2.4E-23
score: 81.9
IPR013810Ribosomal protein S5, N-terminalPROSITEPS50881S5_DSRBDcoord: 150..213
score: 25.087049
NoneNo IPR availableGENE3D3.30.160.20coord: 145..211
e-value: 2.5E-23
score: 83.7
NoneNo IPR availablePANTHERPTHR13718:SF9430S RIBOSOMAL PROTEIN S5, CHLOROPLASTICcoord: 5..306
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 147..215
IPR005712Ribosomal protein S5, bacterial-typeTIGRFAMTIGR01021TIGR01021coord: 149..303
e-value: 1.8E-59
score: 198.0
IPR005712Ribosomal protein S5, bacterial-typeHAMAPMF_01307_BRibosomal_S5_Bcoord: 127..303
score: 32.425377
IPR000851Ribosomal protein S5PANTHERPTHR13718RIBOSOMAL S SUBUNITcoord: 5..306
IPR018192Ribosomal protein S5, N-terminal, conserved sitePROSITEPS00585RIBOSOMAL_S5coord: 167..199
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 220..298

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0016064.1Tan0016064.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009955 adaxial/abaxial pattern specification
biological_process GO:1901259 chloroplast rRNA processing
biological_process GO:0032544 plastid translation
biological_process GO:0009409 response to cold
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005763 mitochondrial small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003729 mRNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding