Tan0015985 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTACATTGATCACCAAGCAAAAGAAAATAAACACAAACGTTTGCAAAACACTAAAATCAGAAAATGTTTCCTGCATCAAGCAAGCTACATTTCTCCAGGGGGGAGATCAAGGAAATCTTCAGAGAGCACGATATCGATGGAGATGGTCGATTGAGCATCAGTGAGCTCGTGAAGGCCTTCGGGTTCTTCGGCAGTATCCTTCCTTTCTACAAAGCTCACTATGGTTTGGCTTTTGCCGATACTGATTGTGATGGCTACATCGATGAGGATGAGCTCGACAAGCTCGTCGACTATGCCGAGAAGTTTCAGCACAAGAGGCACTGCGGCTAATAATGTAACATCCTCAGTTTGCTAATAATGTTCCGTTTGAATAAAAAGAAAAAGAGGGTTGGCTAGCTAGCTAGTCCTGCTTTGGTTTGGCTATTAAATGGGAAGTGCTTCCATTGATCGAATTATATATTGTTTGTGTTTAAAAAAAAATATGGTCTCGTTTGATAACATTTCCATTTTTTGTTTCCTGTTTTCCAATTTTTAAGAATAAGAAACAATAATATGTTTGATAACTATTTCTGTTTCTTGGTTCTTAAAAACAAGAAACAAAAACAGAAGTTTATTTGATAA CTTACATTGATCACCAAGCAAAAGAAAATAAACACAAACGTTTGCAAAACACTAAAATCAGAAAATGTTTCCTGCATCAAGCAAGCTACATTTCTCCAGGGGGGAGATCAAGGAAATCTTCAGAGAGCACGATATCGATGGAGATGGTCGATTGAGCATCAGTGAGCTCGTGAAGGCCTTCGGGTTCTTCGGCAGTATCCTTCCTTTCTACAAAGCTCACTATGGTTTGGCTTTTGCCGATACTGATTGTGATGGCTACATCGATGAGGATGAGCTCGACAAGCTCGTCGACTATGCCGAGAAGTTTCAGCACAAGAGGCACTGCGGCTAATAATGTAACATCCTCAGTTTGCTAATAATGTTCCGTTTGAATAAAAAGAAAAAGAGGGTTGGCTAGCTAGCTAGTCCTGCTTTGGTTTGGCTATTAAATGGGAAGTGCTTCCATTGATCGAATTATATATTGTTTGTGTTTAAAAAAAAATATGGTCTCGTTTGATAACATTTCCATTTTTTGTTTCCTGTTTTCCAATTTTTAAGAATAAGAAACAATAATATGTTTGATAACTATTTCTGTTTCTTGGTTCTTAAAAACAAGAAACAAAAACAGAAGTTTATTTGATAA ATGTTTCCTGCATCAAGCAAGCTACATTTCTCCAGGGGGGAGATCAAGGAAATCTTCAGAGAGCACGATATCGATGGAGATGGTCGATTGAGCATCAGTGAGCTCGTGAAGGCCTTCGGGTTCTTCGGCAGTATCCTTCCTTTCTACAAAGCTCACTATGGTTTGGCTTTTGCCGATACTGATTGTGATGGCTACATCGATGAGGATGAGCTCGACAAGCTCGTCGACTATGCCGAGAAGTTTCAGCACAAGAGGCACTGCGGCTAA MFPASSKLHFSRGEIKEIFREHDIDGDGRLSISELVKAFGFFGSILPFYKAHYGLAFADTDCDGYIDEDELDKLVDYAEKFQHKRHCG Homology
BLAST of Tan0015985 vs. ExPASy Swiss-Prot
Match: Q9C9U8 (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.2e-04 Identity = 21/57 (36.84%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of Tan0015985 vs. ExPASy Swiss-Prot
Match: Q8RYJ9 (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 2.9e-04 Identity = 28/69 (40.58%), Postives = 39/69 (56.52%), Query Frame = 0
BLAST of Tan0015985 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 8.4e-04 Identity = 23/61 (37.70%), Postives = 35/61 (57.38%), Query Frame = 0
BLAST of Tan0015985 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa]) HSP 1 Score: 148.3 bits (373), Expect = 3.1e-32 Identity = 70/87 (80.46%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of Tan0015985 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29 Identity = 64/87 (73.56%), Postives = 77/87 (88.51%), Query Frame = 0
BLAST of Tan0015985 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus]) HSP 1 Score: 137.5 bits (345), Expect = 5.5e-29 Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Tan0015985 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus]) HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25 Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of Tan0015985 vs. NCBI nr
Match: XP_022144156.1 (probable calcium-binding protein CML15 [Momordica charantia]) HSP 1 Score: 120.6 bits (301), Expect = 7.0e-24 Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of Tan0015985 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32 Identity = 70/87 (80.46%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of Tan0015985 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-29 Identity = 64/87 (73.56%), Postives = 77/87 (88.51%), Query Frame = 0
BLAST of Tan0015985 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 6.2e-26 Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of Tan0015985 vs. ExPASy TrEMBL
Match: A0A6J1CSH1 (probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC111013915 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.4e-24 Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of Tan0015985 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23 Identity = 58/82 (70.73%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of Tan0015985 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family ) HSP 1 Score: 46.2 bits (108), Expect = 1.6e-05 Identity = 21/57 (36.84%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of Tan0015985 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 44.3 bits (103), Expect = 6.0e-05 Identity = 23/61 (37.70%), Postives = 35/61 (57.38%), Query Frame = 0
BLAST of Tan0015985 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 44.3 bits (103), Expect = 6.0e-05 Identity = 23/61 (37.70%), Postives = 35/61 (57.38%), Query Frame = 0
BLAST of Tan0015985 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 ) HSP 1 Score: 42.4 bits (98), Expect = 2.3e-04 Identity = 20/54 (37.04%), Postives = 29/54 (53.70%), Query Frame = 0
BLAST of Tan0015985 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family ) HSP 1 Score: 41.6 bits (96), Expect = 3.9e-04 Identity = 24/73 (32.88%), Postives = 40/73 (54.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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