
Tan0015972 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGTGGAAAAAGTGATCTCCAGTACTATCCTTGTTTTACTTGTTTTTAGCAGTTTGTGTCCCATTGCTCATTCTGATCATCCAAGTGCGGTCTCAAATAATTTTATTTCCAATACATGCAACAAATTTGAAGAAAAAGTCATCCAAATATGCATGGCTGTGATAGAATCAGATCCTCATCAAGAGCTGAAATTAAACTATTCAGGGCTTTTAGCCCTCTTTATAAACCATTCTCTTGCTAATGCCACTGATAGTCTTTCCTACCTTATGGAACAACTCAAGAGATCGGACTTAGACAACCACACAAGAATTGTGTTTGACACATGTGTAAATGAGTATGAGAGCGGCATAGCTACTCTTCAATCATCATTAGAAGCATTGTTAAAGCAACACCATAAAAATTTGAGTTTGAGTGTAAGTTCTGTGTTCCAAGCAATAGATGATTGTGAATTTGAATTTGAATTGGACCATGTACAAGAACCGCCATCTTGGTTGTCTCGTTATCTTAATCTACGCAACCTTATGGAACTCTCAATGGGAATTGCAAATCTCATACAGTGCAAAAAGATTGCTGCTTGTTATTGA ATGACAGTGGAAAAAGTGATCTCCAGTACTATCCTTGTTTTACTTGTTTTTAGCAGTTTGTGTCCCATTGCTCATTCTGATCATCCAAGTGCGGTCTCAAATAATTTTATTTCCAATACATGCAACAAATTTGAAGAAAAAGTCATCCAAATATGCATGGCTGTGATAGAATCAGATCCTCATCAAGAGCTGAAATTAAACTATTCAGGGCTTTTAGCCCTCTTTATAAACCATTCTCTTGCTAATGCCACTGATAGTCTTTCCTACCTTATGGAACAACTCAAGAGATCGGACTTAGACAACCACACAAGAATTGTGTTTGACACATGTGTAAATGAGTATGAGAGCGGCATAGCTACTCTTCAATCATCATTAGAAGCATTGTTAAAGCAACACCATAAAAATTTGAGTTTGAGTGTAAGTTCTGTGTTCCAAGCAATAGATGATTGTGAATTTGAATTTGAATTGGACCATGTACAAGAACCGCCATCTTGGTTGTCTCGTTATCTTAATCTACGCAACCTTATGGAACTCTCAATGGGAATTGCAAATCTCATACAGTGCAAAAAGATTGCTGCTTGTTATTGA ATGACAGTGGAAAAAGTGATCTCCAGTACTATCCTTGTTTTACTTGTTTTTAGCAGTTTGTGTCCCATTGCTCATTCTGATCATCCAAGTGCGGTCTCAAATAATTTTATTTCCAATACATGCAACAAATTTGAAGAAAAAGTCATCCAAATATGCATGGCTGTGATAGAATCAGATCCTCATCAAGAGCTGAAATTAAACTATTCAGGGCTTTTAGCCCTCTTTATAAACCATTCTCTTGCTAATGCCACTGATAGTCTTTCCTACCTTATGGAACAACTCAAGAGATCGGACTTAGACAACCACACAAGAATTGTGTTTGACACATGTGTAAATGAGTATGAGAGCGGCATAGCTACTCTTCAATCATCATTAGAAGCATTGTTAAAGCAACACCATAAAAATTTGAGTTTGAGTGTAAGTTCTGTGTTCCAAGCAATAGATGATTGTGAATTTGAATTTGAATTGGACCATGTACAAGAACCGCCATCTTGGTTGTCTCGTTATCTTAATCTACGCAACCTTATGGAACTCTCAATGGGAATTGCAAATCTCATACAGTGCAAAAAGATTGCTGCTTGTTATTGA MTVEKVISSTILVLLVFSSLCPIAHSDHPSAVSNNFISNTCNKFEEKVIQICMAVIESDPHQELKLNYSGLLALFINHSLANATDSLSYLMEQLKRSDLDNHTRIVFDTCVNEYESGIATLQSSLEALLKQHHKNLSLSVSSVFQAIDDCEFEFELDHVQEPPSWLSRYLNLRNLMELSMGIANLIQCKKIAACY Homology
BLAST of Tan0015972 vs. NCBI nr
Match: XP_022137307.1 (uncharacterized protein LOC111008804 [Momordica charantia]) HSP 1 Score: 202.6 bits (514), Expect = 3.1e-48 Identity = 101/164 (61.59%), Postives = 125/164 (76.22%), Query Frame = 0
BLAST of Tan0015972 vs. NCBI nr
Match: XP_038895889.1 (putative pectinesterase/pectinesterase inhibitor 22 [Benincasa hispida]) HSP 1 Score: 127.5 bits (319), Expect = 1.3e-25 Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 0
BLAST of Tan0015972 vs. NCBI nr
Match: KAG6572152.1 (Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123.6 bits (309), Expect = 1.8e-24 Identity = 58/166 (34.94%), Postives = 104/166 (62.65%), Query Frame = 0
BLAST of Tan0015972 vs. NCBI nr
Match: KAG6572388.1 (hypothetical protein SDJN03_29116, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 118.6 bits (296), Expect = 5.9e-23 Identity = 60/163 (36.81%), Postives = 99/163 (60.74%), Query Frame = 0
BLAST of Tan0015972 vs. NCBI nr
Match: XP_023511468.1 (uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117.1 bits (292), Expect = 1.7e-22 Identity = 59/171 (34.50%), Postives = 100/171 (58.48%), Query Frame = 0
BLAST of Tan0015972 vs. ExPASy TrEMBL
Match: A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 1.5e-48 Identity = 101/164 (61.59%), Postives = 125/164 (76.22%), Query Frame = 0
BLAST of Tan0015972 vs. ExPASy TrEMBL
Match: A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.6e-18 Identity = 60/184 (32.61%), Postives = 104/184 (56.52%), Query Frame = 0
BLAST of Tan0015972 vs. ExPASy TrEMBL
Match: A0A1U7YVD9 (cell wall / vacuolar inhibitor of fructosidase 2-like OS=Nelumbo nucifera OX=4432 GN=LOC104587371 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-07 Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = 0
BLAST of Tan0015972 vs. ExPASy TrEMBL
Match: A0A443P2W9 (Putative invertase inhibitor OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01397200 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06 Identity = 36/127 (28.35%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of Tan0015972 vs. ExPASy TrEMBL
Match: A0A5N5HXM9 (Invertase inhibitor OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_028565 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06 Identity = 55/192 (28.65%), Postives = 88/192 (45.83%), Query Frame = 0
BLAST of Tan0015972 vs. TAIR 10
Match: AT3G17230.1 (invertase/pectin methylesterase inhibitor family protein ) HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04 Identity = 42/170 (24.71%), Postives = 76/170 (44.71%), Query Frame = 0
BLAST of Tan0015972 vs. TAIR 10
Match: AT1G48020.1 (pectin methylesterase inhibitor 1 ) HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04 Identity = 43/184 (23.37%), Postives = 86/184 (46.74%), Query Frame = 0
BLAST of Tan0015972 vs. TAIR 10
Match: AT3G17225.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 2.2e-04 Identity = 38/146 (26.03%), Postives = 67/146 (45.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|