Tan0015965 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTAAAATTCAATAATCTCTATTCAACTCTCAACCACCCCACTCACAAACTCACTCTCTTCTTTCTTCTTCTTTACCCATGTGGTCGGAGCCGTCCCACACGGCGGAGCAGAGCTCTACTCTGACTCTTGCTCTGTCTTGGCTTCCGCCGCAGCCTCCCTCGATGCCCACGCCGCCTCGTTTAACATTGGCCTCCGTTCCCTTTTTGTGGGAGGAGGCGCCGGGGAAGCCCCGGCCATCCGCTGGATCGGAAATTACGTGGCCGTCGCCGGCGCTGGGGGACCTGCCTCCGCCTCCCCGGCTGTTGAACGAAGCCAAACAGAGCACTCTGCTCTCGCCCACGACGGTGCTCGACGGGCCGGAAAGGGCTGGCGACGGATCGAAGAGATGGGGTAGTTTCAGGATGTGTAAGGAGTTCGTCGGCGGCGGCAACGACTCTTTGGTCGCCGGTGTTGACGGCGGCGGTGGAAGCGGGAGGTTTAGAAGGAAAAGGACTCCGTCATTGTCGGTTTCTTCTTATGGAAGATCACACTTCTTGGTAAGTCCAAATATTAATTTCCAACTTTTTTTTTTTCATATAATATCTTTCCTTTAACAAACAAAAAGTGTGTGAATTAAAATGTTAAACTTGATAAAATTTTTGTTTTCTTATGCTAAATATGTTAAATGGTTTTTAATTTTCAAATTTACCCTCTATGCATTAAAAAATTTCAACTGGTTTCTTTTGTTAAGAAAAAAAACTTATGTATTATTAAGTTATTATTTTATTAATATATTTAAATGTAAAAATATGTCACTTGAATGCTACTTGATACATTTATATTTCATTAATAAAATTTATTTATCTTAAATGCCATTATTAAAATATGTTAATAAAATAATAATTGCTAAATTTCAGTTTAGCTAAAAGATTAAGCCCACTATTTAATATACTATTTTCGTTGATATATGTGATGGGAGTGAGAAGATTTTCATATGAATAATATGAGTCAAATTTTTAACGAAGCAAATATATGAAAAATTTTAACCTACAATCTTTGGAGATATACAAATTTGGTTAAATGACTAATAATATAAAATTGATGTTGGAAACTAAACTATGCATTCTCATATATAAGAGTTGTGGAGACTAAAATAAAAGAATTTAAAATTCTAGAAGCTAAATTAAAATGTTTAAAAAGTTAGAGACTAAAATGAAATATCTACAAAAATTTAGACTATCAGACATTTGGTTAATGGGAAGTTTAATTATATATAATTTGTTATTAAAAGGGCTAATTACATGGTTAAATTTTCCTAAAAGAAAAAAAAATTACATTGTTAAATAAATTAGACTTCAATGGGTATAAGCTAGAAAAGAAAAACAGTAGTTAGGTAGGAATGTCCTATGAGTCTATGACTCACCACTAAACTTTTGATTAGGAGAGAGAATGAGAGAGAAAAAAATAAGTTTTTTTTTTCTTCTTTTAAAAAAGAAAGTAAACATGTGTCAAAGTGGAGACCGATTAAGGAGGGAGGAAGAGAAGTCACAAGACAGAATATAAGAAAAAGTAAAAATAAATTTTTAAAAAATAACAATCAATAATATAAATCTTAACACTTCACCTAAAAATTGTCACTTCAACATGTCACATTATATTTTTTCGTTAGTCAACTAACGGTCAATTTAATTACAGGAACCTTAGACCAAATAACCACCAACTTTAAACTTCAAGAACTAATGGGTTGTTTGGGCATAAGTTATAATAATTTGTGTTATTATAACCCGTAAATACTTTGCACCCCAAACACAGACTATTATAACCCAAGACTATGCTACTCTGTATTTTAAATAATATTATATGATTCCACAGACTATAATAACCCGTAGACTATTATAATATTCTGTTATTATAACTCACCAAAAGCCCCAAACAATCCCTAAAAGTGTATTTTGCTCTTCTAAAATATAATTATATTTTTTTTAGTTCAACAATATATAGAGCGGAGATATTCAGATCTCTAATCTTTAATGTGGTAATAAATAAATATATATCTTAACCAGTTGAGTTGTATTAAGAGCTCAAATAATATTGGTTAAACGATAATATAACAAGATTATAAATTAAAATTTAAATCAAAGTCGATCATATATGTTTGAGTTTTAAGAATATGAAAATCAAACTTATAAAGCTACTTGCGAGAAAGGATTTTGCCAACTTATTTATCTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTCAAATGATTAGCATCATTTTATTTATACCCTTGACCTTGAGTCTTATTCATTTTCCATTTTGTAACCTAAATGGAAGATTGTTGATAATATAATGACTCAATTGAATTGCAGATCAAGATCTATGAGAGCTTTAAACAAGTTCTTTCGTGGAGAGGAAGACCAAGATATAATTAACTTCAAA CTCTAAAATTCAATAATCTCTATTCAACTCTCAACCACCCCACTCACAAACTCACTCTCTTCTTTCTTCTTCTTTACCCATGTGGTCGGAGCCGTCCCACACGGCGGAGCAGAGCTCTACTCTGACTCTTGCTCTGTCTTGGCTTCCGCCGCAGCCTCCCTCGATGCCCACGCCGCCTCGTTTAACATTGGCCTCCGTTCCCTTTTTGTGGGAGGAGGCGCCGGGGAAGCCCCGGCCATCCGCTGGATCGGAAATTACGTGGCCGTCGCCGGCGCTGGGGGACCTGCCTCCGCCTCCCCGGCTGTTGAACGAAGCCAAACAGAGCACTCTGCTCTCGCCCACGACGGTGCTCGACGGGCCGGAAAGGGCTGGCGACGGATCGAAGAGATGGGGTAGTTTCAGGATGTGTAAGGAGTTCGTCGGCGGCGGCAACGACTCTTTGGTCGCCGGTGTTGACGGCGGCGGTGGAAGCGGGAGGTTTAGAAGGAAAAGGACTCCGTCATTGTCGGTTTCTTCTTATGGAAGATCACACTTCTTGATCAAGATCTATGAGAGCTTTAAACAAGTTCTTTCGTGGAGAGGAAGACCAAGATATAATTAACTTCAAA ATGTGGTCGGAGCCGTCCCACACGGCGGAGCAGAGCTCTACTCTGACTCTTGCTCTGTCTTGGCTTCCGCCGCAGCCTCCCTCGATGCCCACGCCGCCTCGTTTAACATTGGCCTCCGTTCCCTTTTTGTGGGAGGAGGCGCCGGGGAAGCCCCGGCCATCCGCTGGATCGGAAATTACGTGGCCGTCGCCGGCGCTGGGGGACCTGCCTCCGCCTCCCCGGCTGTTGAACGAAGCCAAACAGAGCACTCTGCTCTCGCCCACGACGGTGCTCGACGGGCCGGAAAGGGCTGGCGACGGATCGAAGAGATGGGGTAGTTTCAGGATGTGTAAGGAGTTCGTCGGCGGCGGCAACGACTCTTTGGTCGCCGGTGTTGACGGCGGCGGTGGAAGCGGGAGGTTTAGAAGGAAAAGGACTCCGTCATTGTCGGTTTCTTCTTATGGAAGATCACACTTCTTGATCAAGATCTATGAGAGCTTTAAACAAGTTCTTTCGTGGAGAGGAAGACCAAGATATAATTAA MWSEPSHTAEQSSTLTLALSWLPPQPPSMPTPPRLTLASVPFLWEEAPGKPRPSAGSEITWPSPALGDLPPPPRLLNEAKQSTLLSPTTVLDGPERAGDGSKRWGSFRMCKEFVGGGNDSLVAGVDGGGGSGRFRRKRTPSLSVSSYGRSHFLIKIYESFKQVLSWRGRPRYN Homology
BLAST of Tan0015965 vs. NCBI nr
Match: XP_022958693.1 (uncharacterized protein LOC111459844 [Cucurbita moschata]) HSP 1 Score: 270.8 bits (691), Expect = 8.2e-69 Identity = 140/172 (81.40%), Postives = 146/172 (84.88%), Query Frame = 0
BLAST of Tan0015965 vs. NCBI nr
Match: XP_022995989.1 (uncharacterized protein At4g00950-like [Cucurbita maxima]) HSP 1 Score: 269.2 bits (687), Expect = 2.4e-68 Identity = 140/172 (81.40%), Postives = 146/172 (84.88%), Query Frame = 0
BLAST of Tan0015965 vs. NCBI nr
Match: KAG6605789.1 (hypothetical protein SDJN03_03106, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035754.1 hypothetical protein SDJN02_02552, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67 Identity = 139/172 (80.81%), Postives = 145/172 (84.30%), Query Frame = 0
BLAST of Tan0015965 vs. NCBI nr
Match: XP_038875428.1 (uncharacterized protein LOC120067888 [Benincasa hispida]) HSP 1 Score: 236.1 bits (601), Expect = 2.3e-58 Identity = 121/156 (77.56%), Postives = 130/156 (83.33%), Query Frame = 0
BLAST of Tan0015965 vs. NCBI nr
Match: KAA0042546.1 (uncharacterized protein E6C27_scaffold44G00400 [Cucumis melo var. makuwa] >TYK05950.1 uncharacterized protein E5676_scaffold376G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42 Identity = 114/179 (63.69%), Postives = 123/179 (68.72%), Query Frame = 0
BLAST of Tan0015965 vs. ExPASy TrEMBL
Match: A0A6J1H3S6 (uncharacterized protein LOC111459844 OS=Cucurbita moschata OX=3662 GN=LOC111459844 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 4.0e-69 Identity = 140/172 (81.40%), Postives = 146/172 (84.88%), Query Frame = 0
BLAST of Tan0015965 vs. ExPASy TrEMBL
Match: A0A6J1K7H0 (uncharacterized protein At4g00950-like OS=Cucurbita maxima OX=3661 GN=LOC111491336 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.2e-68 Identity = 140/172 (81.40%), Postives = 146/172 (84.88%), Query Frame = 0
BLAST of Tan0015965 vs. ExPASy TrEMBL
Match: A0A5A7TKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00430 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 6.4e-43 Identity = 114/179 (63.69%), Postives = 123/179 (68.72%), Query Frame = 0
BLAST of Tan0015965 vs. ExPASy TrEMBL
Match: A0A1S3AU39 (uncharacterized protein LOC103482969 OS=Cucumis melo OX=3656 GN=LOC103482969 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 7.1e-42 Identity = 113/179 (63.13%), Postives = 122/179 (68.16%), Query Frame = 0
BLAST of Tan0015965 vs. ExPASy TrEMBL
Match: A0A6J1DV06 (uncharacterized protein At4g00950-like OS=Momordica charantia OX=3673 GN=LOC111024622 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 2.3e-40 Identity = 106/178 (59.55%), Postives = 115/178 (64.61%), Query Frame = 0
BLAST of Tan0015965 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 4.0e-13 Identity = 66/197 (33.50%), Postives = 81/197 (41.12%), Query Frame = 0
BLAST of Tan0015965 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 66/173 (38.15%), Postives = 77/173 (44.51%), Query Frame = 0
BLAST of Tan0015965 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10 Identity = 60/186 (32.26%), Postives = 73/186 (39.25%), Query Frame = 0
BLAST of Tan0015965 vs. TAIR 10
Match: AT5G51680.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 42.0 bits (97), Expect = 5.8e-04 Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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