Tan0015736 (gene) Snake gourd v1

Overview
NameTan0015736
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like
LocationLG05: 73989962 .. 73994304 (+)
RNA-Seq ExpressionTan0015736
SyntenyTan0015736
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCACCGCCGGACGATTTCGATGCGGAGCATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGAGAACACATTGTGAGAGAGAAATGGATCGATATCGAGAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGCATCGAAGGAGTAAACCATCTTCTGAAATGCCGCCACCTTGTCCAACAATACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGATGGACGCCATCCATCCCTTCATGGTTCTCTCTTTTCGTCTCTCATTCTGTTTAATTTCCGAGAATTTCTTTTTTTTTTTTTAATTTATGTTTTTGGGTAGAAAATGGAAATATTTCGACTAACTGAAAGCCGGTCATTAATCTATGATTGGTTACTGATGCTCACAGTGGGAATCTGCTCCGAATTGGAAGTGTTGTCTTCTAAAATGTTTCTTGTTTATAAAACTTAGTGGGTGTAGACGTTTTGAAATTTATCTGATTCATGTCAATCTTTTGAAGTTGGGGTACTCGCTGGCTGCATTATTCTCCTTTTTTTTTCCCTCAGGTTCCCTATGCAATTTAAATGACTGAGTAAATGAAATATTATGATCTGATGTTGTCTCTTGCTTCTGATTAGGTCCTAAAGTGGAGCCAGTCGAATAAGAGTAAATTGCTGGGAGGAATAACGGTGAGTTTAAATGTTCCCAAGTTGTTTAGTTAATTTTATTACTTGTGATCGTAATGATTTCCAAACCTTTTTTTTTCAGAGATTGAATAAATGAACAATGCATATTAGCTCTATAAGGATTAAAATATCTGTCCATATGACAAAGAATGTAAATAAGAGGGTTTGATATCCATACTAAGAGTTAGTTGATATCTTTGATATCTTGTATAAATACTTATAAAACATAAAAAATATCATCAATTAGTTACCAACATGAATATAAATACTAATAATAAGATCTATAACTTAGAAAGTAAAAGAACTTAACAAAGAAGTGTTTGGTTGTGTGTCCACAAAGAGAAACCAACTATTGAAAGAAGATTGATGCTAGATTGGTGACTGATTTTCTCCCTATTAGTCTCACTATATGCCTTTACAAAATTATTGTTGGGGTCCTATCCGAACGACCTTCCTCTTACCATTACTGATTTCCAAACCGCCTTTGTCGAGGGCAGACAGATATTGGAGGCTTCTCTCCATGGCAAATGAGCTTATTGATGAGTGGCAATGAAAGAAGAAGAAAAGTGTGGTCATTAAACTGGATGTTGAAAAAGCTTTTGATAAGGTGGATTGGGCTTACCTTGATCACATACTCACTGTTAAAGGTTTCAGTACTAAGTGTAGATCATGGATTAAAGGGTGCATCTCCTCTGAAAATTTCTCAATTCTCATAAATGGTCATCCTCGTGGCAAAATTGTGGCATCTCGAAGCCTCAGACAAGGAGAACCCTTATCCCCTTTCCTTTTTTATTATGATTATGGACAACTTTATCAGTTACCCTCCAAACATGAAAATCACATCAGAGGCTTTAGGATTGGTCAAGATAACCTAAATATCAATCACATCCAGTTTGCAGACGAGACTATACTTTTCTCTGATTTCGAAGATGAATCATTTGTCCACAGTCTGGTCCAAGTGGTTAATAGTTTTAAGCAAGCTTCGGGCTACAACATCAATCTTCATAAATACATCGACATCAATATGGACCCCACTGTTATTGTGGATATTGCACAGAATTATGGTTGTAAGGTGGGTGACTGGCCTAATACTTATCTAGGGCTCCCTCTCAATGGAGCTCAAAACGAGTGGATTTTAGGCTCCTATCATAGAAAAAATCGAGAGAAGATTTTCGGCATGGGGATCTACCTTTATATTTAAAGGAGGAAGATTCACACTCCTTCAGGCTACTCTTTCCAATCTCCCCACATACTACCTCTCTTTGTCTCATTTGCCTACCAAGGTAGGAAAGGAAATGAAAAGATTGTTTAGAAACTTCTTATGTAAAGGTGGTACAAATGAGCAGTGGGTTAGATGGAGTAATACACTCTATCCTATTGATCAAGGGGGCCTTGGTCTTCATTCCATGAGGGACAAAAACAATACTTCTAGCTAAATGGGTTTGGCATTTTAACTATGAGAAAAATGCTTTGTGGAGAAAGCTTATTAGAGGAAAATACAGGTCGTCAACTTATCTAAATTGGGTCACATCTGCTAATGCCAAAGGAAAAATATAGTTAAGCACCAAAGCCTCATCAGTCATCACCAACCGTATTTGTCACCAAGTGGGAAACGAAGCAAACACACTTTTTTGGCATGATCCATGGGTTACTAGATTCACATTGGCAGCTCGTTTTCCCTGCCTCTTACGGCTATCACATTGTAAAAAAAGCCACGGTGAAAGACGTATGGAACAAAGATCACAATTTTTTGAGACCTTGACTTGGGAGAAACTTGAAAGATGATGAAGCTTGGGACGGGGCATAACTAAGCCTTGACCTTGACCCCATTGTCCTTCCACAATTTGAAGATTCTTGGAATTGGCCTCTTAATCCCAAGGACTGTTTGCAAATCCCTCCTATTGGGCAGGGGTGATAGCTCTTGTCTCATTGAGTTCTCTTTATCTAAAGCCATTTGGAAAGACAACTACCCAAAGAAAATCAAAATTTTCCTATGGGAGCTCTCCCTCAAAGCCATCAACACTAATGAAGTTCTTCAAAGGCATATGCCTTATATGACATTATTTGCTGGGTGGTGCTGTCTTTATAAATTAGATGCAATGTTTTCCAAAGCAAGGCACACCACAGGGCGACAAGCCCTTTGATCGCCCAAGGGCGAGAGGCGACAAAAAGACGTCGCCTGAGTGAAGCGAGGCACAATAAATAAATATATAAATAAATAATATATAGAGCATAAATTTTATAGTAAATATAGTCATATAAAATGTCAAAACCTTAAAAGCTTAATACTAATTGGTAAAAACAACAAAATGTTAAAAACATCAAATAATAGTCAAGTTCTACTTCTGGTAGTTTCATAAGACATAATCAAGTCAGAATGAATCAATGAACCAAAAATAATAATGATAAAAAACAACTAGTCTAAAAGACTAAAATAATACTAATTGTTAAAAACAACAAAATATTAAAAACATCAAATAATAGTCATGTTCTACTTCTGGTAGTTTCATAAGACATAATCAAGTCATTGAGAATGAATCAATGAACAAAAATAATAAAGATAAAGTTAAGTAATTTGTAGTTTTAAAAATTAAAAAAAAAAAAAACTGCATACAGGGAGCAGGCGCTCGCCTTCGACAATGGCAAAGGCAAGGCAAGGCGAGCAAAGGTGCTCGCCTGATTGAAGTCGCACGCCTGGGCAAACCATGAGGCGCTCCTCCGGCTAAACGCCTCGCCTCTCGCCTCAGGCGAGCGCCTGGGGGCGCCTCGAAAACACTGATTAGATGACGAATCACAAAACCACATTTTTATTCACTATTCATTTGCTAGAGGGTTCTGGAACATGCTTTTAAACTCTTTTTGATGGTATTTGGTTACTCCGGGAATTGTCAAAGACCTTCTCAACATCGTGTTGTTGGGGCACCCTTTCAAGAACACAAAGGCTCTGTTGTGGTTGAACATTACTAGGGCCTTCTTTTGGATTATTTGGAAAGAACGAAACCAAAGAGTATTTTGGGAATCAAATTTTTCTCTTGACTTGTTCTTTGATCTTGTTATTTATTATGCTATGATTGCTATCTCTTGGTGCAAATTGCCCAATCTTTTTGCTTCCTACACTTATGCTTCCCTTTTAGTCAATTGGGAAAGTCTCTTGTAATTGCTATGGATTTTTCATCCTTTTTTAAAGTTATACATCAATAAAGTTGTTTCTTATCAAAATAATAATAATAATAATTTTTTTTATTTACAGAAATATCTGTCGATATACCTATAAAATTGAAATCTTGATATCTACATTGAGATCGGCATCAATATTTTAATACTTGATTGCTACAGGGTGTGAAAATAATTTTTAACTCGGATCAATGGTCAATAATTCTGTTTAATTTCTATCTCTGTTGAGTGAGAACTTTGTAACAATGTACAACAAGCTTTCCTAACATTTTTCTCACTGGTGGTGTGTTTTTTAGAATGCTTGAAATTGTTGTTCACAAGCCACTCAATCATATTTCTTTTAAGTGCACGTAGGAGACATGACATTAAGATTAAGTGGGGGGTGTTGAAGCTGTATATATCTTTGGGGGTGTTGTCATTCTATGGGGTCCTCGTAATTTGTTCTCCTTAGAAGTGGTGTGA

mRNA sequence

ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCACCGCCGGACGATTTCGATGCGGAGCATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGAGAACACATTGTGAGAGAGAAATGGATCGATATCGAGAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGCATCGAAGGAGTAAACCATCTTCTGAAATGCCGCCACCTTGTCCAACAATACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGATGGACGCCATCCATCCCTTCATGGTTCTCTCTTTTCCTTTCCTAACATTTTTCTCACTGGTGGTGTGTTTTTTAGAATGCTTGAAATTGTTGTTCACAAGCCACTCAATCATATTTCTTTTAAGTTGGGGGGTGTTGAAGCTGTATATATCTTTGGGGGTGTTGTCATTCTATGGGGTCCTCGTAATTTGTTCTCCTTAGAAGTGGTGTGA

Coding sequence (CDS)

ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCACCGCCGGACGATTTCGATGCGGAGCATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGAGAACACATTGTGAGAGAGAAATGGATCGATATCGAGAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGCATCGAAGGAGTAAACCATCTTCTGAAATGCCGCCACCTTGTCCAACAATACCTTGATTCCACTCGCGGCATCGGCTGGGGCAAGGATGGACGCCATCCATCCCTTCATGGTTCTCTCTTTTCCTTTCCTAACATTTTTCTCACTGGTGGTGTGTTTTTTAGAATGCTTGAAATTGTTGTTCACAAGCCACTCAATCATATTTCTTTTAAGTTGGGGGGTGTTGAAGCTGTATATATCTTTGGGGGTGTTGTCATTCTATGGGGTCCTCGTAATTTGTTCTCCTTAGAAGTGGTGTGA

Protein sequence

MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHGSLFSFPNIFLTGGVFFRMLEIVVHKPLNHISFKLGGVEAVYIFGGVVILWGPRNLFSLEVV
Homology
[Close]
BLAST of Tan0015736 vs. ExPASy Swiss-Prot
Match: Q94C12 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Arabidopsis thaliana OX=3702 GN=At3g18410 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0 

Query: 1  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH  KCRHLVQQYLDSTRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPISLHG 97

[Close]
BLAST of Tan0015736 vs. ExPASy Swiss-Prot
Match: Q9M9B4 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A OS=Arabidopsis thaliana OX=3702 GN=At1g49140 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-40
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0 

Query: 1  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH  KCRHLVQQYLD+TRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDATRGVGWGKDHRPISLHG 97

[Close]
BLAST of Tan0015736 vs. ExPASy Swiss-Prot
Match: Q03015 (NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=nuo-12.3 PE=3 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 8.5e-07
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 0 

Query: 14 PDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRIEGVNHLLKCRHLV 73
          P  FD    Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL KC HL 
Sbjct: 17 PPTFDGV-DYNDTKRLKQAQDAIIREQWVRVMMGRLVREELSKCYYREGVNHLEKCGHLR 76

Query: 74 QQYL 78
          ++YL
Sbjct: 77 ERYL 79

[Close]
BLAST of Tan0015736 vs. NCBI nr
Match: XP_022994087.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima] >XP_022994089.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima] >XP_022994090.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima] >XP_022994091.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima] >XP_022994092.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima])

HSP 1 Score: 207.2 bits (526), Expect = 1.0e-49
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. NCBI nr
Match: XP_022954577.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata] >XP_022954578.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata] >XP_022954579.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata] >KAG7012120.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 205.7 bits (522), Expect = 3.0e-49
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. NCBI nr
Match: XP_038894613.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida] >XP_038894614.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida] >XP_038894615.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida])

HSP 1 Score: 205.3 bits (521), Expect = 3.9e-49
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. NCBI nr
Match: XP_022924082.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moschata] >XP_023001015.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita maxima] >XP_023519758.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita pepo subsp. pepo] >XP_023519759.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita pepo subsp. pepo] >KAG7019947.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. NCBI nr
Match: XP_022137450.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charantia] >XP_022137451.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 3.3e-48
Identity = 92/96 (95.83%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYRI
Sbjct: 1  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. ExPASy TrEMBL
Match: A0A6J1JUQ8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like OS=Cucurbita maxima OX=3661 GN=LOC111489918 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.9e-50
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. ExPASy TrEMBL
Match: A0A6J1GRC0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like OS=Cucurbita moschata OX=3662 GN=LOC111456807 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. ExPASy TrEMBL
Match: A0A6J1KJX6 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Cucurbita maxima OX=3661 GN=LOC111495279 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.4e-49
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. ExPASy TrEMBL
Match: A0A6J1E7Z3 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Cucurbita moschata OX=3662 GN=LOC111431621 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.4e-49
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. ExPASy TrEMBL
Match: A0A6J1C6P3 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Momordica charantia OX=3673 GN=LOC111008891 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.6e-48
Identity = 92/96 (95.83%), Postives = 95/96 (98.96%), Query Frame = 0 

Query: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60
          MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWIDIEKAKILRE+LRWCYRI
Sbjct: 1  MGRRKTVEFDESPPDDFDAENPYKDPVAMLEMREHIVREKWIDIEKAKILRERLRWCYRI 60

Query: 61 EGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHL KCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]
BLAST of Tan0015736 vs. TAIR 10
Match: AT3G18410.1 (Complex I subunit NDUFS6 )

HSP 1 Score: 167.5 bits (423), Expect = 8.3e-42
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0 

Query: 1  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH  KCRHLVQQYLDSTRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPISLHG 97

[Close]
BLAST of Tan0015736 vs. TAIR 10
Match: AT3G18410.2 (Complex I subunit NDUFS6 )

HSP 1 Score: 167.5 bits (423), Expect = 8.3e-42
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0 

Query: 1  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH  KCRHLVQQYLDSTRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPISLHG 97

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BLAST of Tan0015736 vs. TAIR 10
Match: AT1G49140.1 (Complex I subunit NDUFS6 )

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0 

Query: 1  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLLKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH  KCRHLVQQYLD+TRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDATRGVGWGKDHRPISLHG 97

The following BLAST results are available for this feature:
BLAST of Tan0015736 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94C121.2e-4080.41NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Arabidopsis th... [more]
Q9M9B43.4e-4079.38NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A OS=Arabidopsis th... [more]
Q030158.5e-0740.63NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial OS=Neurospora crass... [more]
BLAST of Tan0015736 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022994087.11.0e-4998.96NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita m... [more]
XP_022954577.13.0e-4997.92NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita m... [more]
XP_038894613.13.9e-4997.92NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispid... [more]
XP_022924082.11.1e-4896.88NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moscha... [more]
XP_022137450.13.3e-4895.83NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charan... [more]
BLAST of Tan0015736 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JUQ84.9e-5098.96NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like OS=Cucurbita... [more]
A0A6J1GRC01.4e-4997.92NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like OS=Cucurbita... [more]
A0A6J1KJX65.4e-4996.88NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Cucurbita maxi... [more]
A0A6J1E7Z35.4e-4996.88NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Cucurbita mosc... [more]
A0A6J1C6P31.6e-4895.83NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Momordica char... [more]
BLAST of Tan0015736 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G18410.18.3e-4280.41Complex I subunit NDUFS6 [more]
AT3G18410.28.3e-4280.41Complex I subunit NDUFS6 [more]
AT1G49140.12.4e-4179.38Complex I subunit NDUFS6 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR13094:SF4NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 10-A-LIKEcoord: 1..97
IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10PANTHERPTHR13094NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNITcoord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0015736.1Tan0015736.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005747 mitochondrial respiratory chain complex I