Tan0015654 (gene) Snake gourd v1

Overview


Name	Tan0015654
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein indeterminate-domain 16
Location	LG09: 73470566 .. 73471291 (+)
RNA-Seq Expression	Tan0015654
Synteny	Tan0015654

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATGAAGATCAGAAGGAGTTGCAGCTGCTTCCGACGCCTCAGTCCATAGCATCGTCCTCATCCCACATGTCGACCCGTCCATCCGACTCGTCGTTACGATTCCGGTCCGATCCATTCGAACCGGGTACAGGATCGTTGGACCTGCAGTTATCAATAAGCCTAAGGCCAATCCGGCCGGCGGGGGCGGAGTGCTTATTCAAGTACGAGGAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAAGCGTACGCGGAGAGAGTGAGAGAGCTTACAAAGAGGGAAATAGAATTGGCTCAAACGGAATTTGCAAGGGCTCGACAGATGTGGGAAAGGGCTAGAGAAGAAGTGGAAAAAGCGGAACGAATGAAAGAGAGAGCCACTCGGCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATCAATAATACCCTTATTAATTACTTCCATTTTCCCATTTTCACCCCCCATATTTTCTTCTATTTCATCAACCTACCTATACCTTATCAACCGTTATATGCAGAGTTTCTTTTAAGTCTCTGCCTGGCTGTTTTTTTTTCCCCTTTGAATTAAGCAAAATAGAGAGAAAATATGGGTTATTAGTCAGATCATGATCATCTTCATCATCAAGTCACAC

mRNA sequence

ATGGAAGATGAAGATCAGAAGGAGTTGCAGCTGCTTCCGACGCCTCAGTCCATAGCATCGTCCTCATCCCACATGTCGACCCGTCCATCCGACTCGTCGTTACGATTCCGGTCCGATCCATTCGAACCGGGTACAGGATCGTTGGACCTGCAGTTATCAATAAGCCTAAGGCCAATCCGGCCGGCGGGGGCGGAGTGCTTATTCAAGTACGAGGAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAAGCGTACGCGGAGAGAGTGAGAGAGCTTACAAAGAGGGAAATAGAATTGGCTCAAACGGAATTTGCAAGGGCTCGACAGATGTGGGAAAGGGCTAGAGAAGAAGTGGAAAAAGCGGAACGAATGAAAGAGAGAGCCACTCGGCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATCAATAATACCCTTATTAATTACTTCCATTTTCCCATTTTCACCCCCCATATTTTCTTCTATTTCATCAACCTACCTATACCTTATCAACCGTTATATGCAGAGTTTCTTTTAAGTCTCTGCCTGGCTGTTTTTTTTTCCCCTTTGAATTAAGCAAAATAGAGAGAAAATATGGGTTATTAGTCAGATCATGATCATCTTCATCATCAAGTCACAC

Coding sequence (CDS)

ATGGAAGATGAAGATCAGAAGGAGTTGCAGCTGCTTCCGACGCCTCAGTCCATAGCATCGTCCTCATCCCACATGTCGACCCGTCCATCCGACTCGTCGTTACGATTCCGGTCCGATCCATTCGAACCGGGTACAGGATCGTTGGACCTGCAGTTATCAATAAGCCTAAGGCCAATCCGGCCGGCGGGGGCGGAGTGCTTATTCAAGTACGAGGAGGTGATGAAGCCGGAGGCGGCGAGCTGCGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAAGCGTACGCGGAGAGAGTGAGAGAGCTTACAAAGAGGGAAATAGAATTGGCTCAAACGGAATTTGCAAGGGCTCGACAGATGTGGGAAAGGGCTAGAGAAGAAGTGGAAAAAGCGGAACGAATGAAAGAGAGAGCCACTCGGCAGATGGACTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAA

Protein sequence

MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

Homology

[Close]

BLAST of Tan0015654 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08
Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 89  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATR 148
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 335 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 394

Query: 149 QMDSTCMEITCQSCRQRFR 167
           ++ ST M++TCQ+C+ +F+
Sbjct: 395 KISSTIMQVTCQTCKGQFQ 413

[Close]

BLAST of Tan0015654 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 38  SDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA 97
           S PFE    SL+LQLSI +     A      ++ E  +          K +A E+ R   
Sbjct: 229 SAPFE----SLELQLSIGM-----ARTSAQARHNEKRE------TSLTKERANEEAR--- 288

Query: 98  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEIT 157
                AE  R+  KR+IE+A+ +F +A+++ E A+ E+EKA  ++E A +++++T MEIT
Sbjct: 289 ----KAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEIT 335

Query: 158 CQSCRQRFR 167
           C SC+Q F+
Sbjct: 349 CHSCKQLFQ 335

[Close]

BLAST of Tan0015654 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.7e-06
Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 46  GSLDLQLSISLRPIRPAGAECLFKYE-EVMKPEAASCVEALKWQAAEQIRLAAMEKAYAE 105
           GS++LQ    L P R    E         M  +  S VE   ++  E     ++E+   E
Sbjct: 267 GSIELQ----LLPSRNCADETSLSLSIGTMDQKTMSEVEKKSYEKGE----TSLER---E 326

Query: 106 RVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQR 165
             R  TKR+IE+A+ EFA A+++ + AR E+ KA   +E A+R++ +T M+ITC +C+Q 
Sbjct: 327 EARRETKRQIEIAELEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQITCHNCKQH 377

Query: 166 FR 167
           F+
Sbjct: 387 FQ 377

[Close]

BLAST of Tan0015654 vs. NCBI nr
Match: XP_008464429.1 (PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa])

HSP 1 Score: 295.0 bits (754), Expect = 4.0e-76
Identity = 162/171 (94.74%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPI 60
           MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPI
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPI 60

Query: 61  RP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120
           RP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA
Sbjct: 61  RPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120

Query: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Sbjct: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 171

[Close]

BLAST of Tan0015654 vs. NCBI nr
Match: KAA0057771.1 (protein indeterminate-domain 16 [Cucumis melo var. makuwa])

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-75
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPI 60
           MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPI
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPI 60

Query: 61  RP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120
           RP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA+EKAYAERVRELTKREIELA
Sbjct: 61  RPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVRELTKREIELA 120

Query: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Sbjct: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 171

[Close]

BLAST of Tan0015654 vs. NCBI nr
Match: XP_038878928.1 (protein indeterminate-domain 16 [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 9.8e-75
Identity = 161/169 (95.27%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFE-PGTGSLDLQLSISLRPI 60
           MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSD FE  G GS+DLQLSISLRPI
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDAFEAAGPGSVDLQLSISLRPI 60

Query: 61  RPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQT 120
           RPA AECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQT
Sbjct: 61  RPA-AECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQT 120

Query: 121 EFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           EFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Sbjct: 121 EFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 168

[Close]

BLAST of Tan0015654 vs. NCBI nr
Match: XP_023516632.1 (protein indeterminate-domain 16-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 153/169 (90.53%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRP 60
           MEDEDQKELQLLPTP +IA  SSSSHMS+RPS SS+RFRSDP+E G GSLDLQLSIS+RP
Sbjct: 1   MEDEDQKELQLLPTPHTIASSSSSSHMSSRPSASSMRFRSDPYEAGPGSLDLQLSISVRP 60

Query: 61  IRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ 120
           IRP  AEC+FKYEEVMKPEAA CVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ
Sbjct: 61  IRPT-AECVFKYEEVMKPEAAGCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ 120

Query: 121 TEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP 168
           TEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP
Sbjct: 121 TEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP 168

[Close]

BLAST of Tan0015654 vs. NCBI nr
Match: XP_022921773.1 (protein indeterminate-domain 16-like [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRP 60
           MEDEDQKELQLLPTP +IA  SSSSHMS+RPS SS+RFRSDP+E G GSLDLQLSIS+RP
Sbjct: 1   MEDEDQKELQLLPTPHTIASSSSSSHMSSRPSASSMRFRSDPYEAGPGSLDLQLSISVRP 60

Query: 61  IRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ 120
           IRP  AEC+FKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ
Sbjct: 61  IRPT-AECVFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ 120

Query: 121 TEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           TEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Sbjct: 121 TEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRAS 169

[Close]

BLAST of Tan0015654 vs. ExPASy TrEMBL
Match: A0A5D3BFD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00530 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 162/171 (94.74%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPI 60
           MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPI
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPI 60

Query: 61  RP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120
           RP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA
Sbjct: 61  RPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120

Query: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Sbjct: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 171

[Close]

BLAST of Tan0015654 vs. ExPASy TrEMBL
Match: A0A1S3CN02 (protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 162/171 (94.74%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPI 60
           MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPI
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPI 60

Query: 61  RP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120
           RP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA
Sbjct: 61  RPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120

Query: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Sbjct: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 171

[Close]

BLAST of Tan0015654 vs. ExPASy TrEMBL
Match: A0A5A7UWD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00540 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.6e-76
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT-GSLDLQLSISLRPI 60
           MEDEDQKELQLLPTP SIASSSSHMS+RPSDSSLRFRSDPFE G+ GS+DLQLSISLRPI
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPI 60

Query: 61  RP--AGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120
           RP  AG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA+EKAYAERVRELTKREIELA
Sbjct: 61  RPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVRELTKREIELA 120

Query: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Sbjct: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 171

[Close]

BLAST of Tan0015654 vs. ExPASy TrEMBL
Match: A0A6J1E4S8 (protein indeterminate-domain 16-like OS=Cucurbita moschata OX=3662 GN=LOC111429927 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSIA--SSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLRP 60
           MEDEDQKELQLLPTP +IA  SSSSHMS+RPS SS+RFRSDP+E G GSLDLQLSIS+RP
Sbjct: 1   MEDEDQKELQLLPTPHTIASSSSSSHMSSRPSASSMRFRSDPYEAGPGSLDLQLSISVRP 60

Query: 61  IRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ 120
           IRP  AEC+FKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ
Sbjct: 61  IRPT-AECVFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ 120

Query: 121 TEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           TEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Sbjct: 121 TEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRAS 169

[Close]

BLAST of Tan0015654 vs. ExPASy TrEMBL
Match: A0A6J1JFV3 (protein indeterminate-domain 16-like OS=Cucurbita maxima OX=3661 GN=LOC111484749 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 153/171 (89.47%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MEDEDQKELQLLPTPQSI---ASSSSHMSTRPSDSSLRFRSDPFEPGTGSLDLQLSISLR 60
           MEDEDQKELQLLPTP +I   +SSSSHMS+RPS SS+RFRSDP+EPG GSLDLQLSIS+R
Sbjct: 1   MEDEDQKELQLLPTPHTIVSSSSSSSHMSSRPSASSMRFRSDPYEPGPGSLDLQLSISVR 60

Query: 61  PIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120
           PIRP  AEC+FKYE+VMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA
Sbjct: 61  PIRPT-AECVFKYEKVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA 120

Query: 121 QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS 169
           QTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Sbjct: 121 QTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRRS 170

[Close]

BLAST of Tan0015654 vs. TAIR 10
Match: AT3G48550.1 (BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 4.4e-33
Identity = 92/169 (54.44%), Postives = 117/169 (69.23%), Query Frame = 0


Query: 2   EDEDQKELQLLPTPQSIASSSSHMSTRPSDSSLRFRSDPFEPGT---GSLDLQLSISLRP 61
           + +  KELQLLP+P S  + S     RP+  +    ++     +     LDL+LSISL  
Sbjct: 4   QQDHHKELQLLPSPPS--TESPVRKHRPTVITTDHHNNHHRSSSMIHHDLDLKLSISLSS 63

Query: 62  IRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQ 121
           I  A        EE+  P     VEALKWQAAEQIRLAA+EKAYAERVRELT+RE+E+AQ
Sbjct: 64  ISTA--------EEL--PNGG--VEALKWQAAEQIRLAAIEKAYAERVRELTRREMEMAQ 123

Query: 122 TEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP 168
           +EFARAR MW++AREEVE+AER+KER+  ++D+ C+EITC SCRQRFRP
Sbjct: 124 SEFARARVMWQKAREEVERAERLKERSMTKIDTACLEITCHSCRQRFRP 158

[Close]

BLAST of Tan0015654 vs. TAIR 10
Match: AT2G01940.1 (C2H2-like zinc finger protein )

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-10
Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 89  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATR 148
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 335 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 394

Query: 149 QMDSTCMEITCQSCRQRFR 167
           ++ ST M++TCQ+C+ +F+
Sbjct: 395 KISSTIMQVTCQTCKGQFQ 413

[Close]

BLAST of Tan0015654 vs. TAIR 10
Match: AT2G01940.2 (C2H2-like zinc finger protein )

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-10
Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 89  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATR 148
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 246 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 305

Query: 149 QMDSTCMEITCQSCRQRFR 167
           ++ ST M++TCQ+C+ +F+
Sbjct: 306 KISSTIMQVTCQTCKGQFQ 324

[Close]

BLAST of Tan0015654 vs. TAIR 10
Match: AT2G01940.3 (C2H2-like zinc finger protein )

HSP 1 Score: 61.2 bits (147), Expect = 9.0e-10
Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 89  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATR 148
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 336 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 395

Query: 149 QMDSTCMEITCQSCRQRFR 167
           ++ ST M++TCQ+C+ +F+
Sbjct: 396 KISSTIMQVTCQTCKGQFQ 414

[Close]

BLAST of Tan0015654 vs. TAIR 10
Match: AT1G25250.1 (indeterminate(ID)-domain 16 )

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 38  SDPFEPGTGSLDLQLSISLRPIRPAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA 97
           S PFE    SL+LQLSI +     A      ++ E  +          K +A E+ R   
Sbjct: 229 SAPFE----SLELQLSIGM-----ARTSAQARHNEKRE------TSLTKERANEEAR--- 288

Query: 98  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEIT 157
                AE  R+  KR+IE+A+ +F +A+++ E A+ E+EKA  ++E A +++++T MEIT
Sbjct: 289 ----KAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEIT 335

Query: 158 CQSCRQRFR 167
           C SC+Q F+
Sbjct: 349 CHSCKQLFQ 335

The following BLAST results are available for this feature:

BLAST of Tan0015654 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IPE3	1.3e-08	41.77	Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5...	[more]
Q9FRH4	1.5e-06	34.88	Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV...	[more]
Q9C9X7	7.7e-06	34.43	Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV...	[more]

BLAST of Tan0015654 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464429.1	4.0e-76	94.74	PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein in...	[more]
KAA0057771.1	1.2e-75	94.15	protein indeterminate-domain 16 [Cucumis melo var. makuwa]	[more]
XP_038878928.1	9.8e-75	95.27	protein indeterminate-domain 16 [Benincasa hispida]	[more]
XP_023516632.1	1.3e-71	90.53	protein indeterminate-domain 16-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022921773.1	1.7e-71	90.59	protein indeterminate-domain 16-like [Cucurbita moschata]	[more]

BLAST of Tan0015654 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFD1	1.9e-76	94.74	Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CN02	1.9e-76	94.74	protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=...	[more]
A0A5A7UWD1	5.6e-76	94.15	Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1E4S8	8.4e-72	90.59	protein indeterminate-domain 16-like OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JFV3	1.1e-71	89.47	protein indeterminate-domain 16-like OS=Cucurbita maxima OX=3661 GN=LOC111484749...	[more]

BLAST of Tan0015654 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48550.1	4.4e-33	54.44	BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:...	[more]
AT2G01940.1	9.0e-10	41.77	C2H2-like zinc finger protein	[more]
AT2G01940.2	9.0e-10	41.77	C2H2-like zinc finger protein	[more]
AT2G01940.3	9.0e-10	41.77	C2H2-like zinc finger protein	[more]
AT1G25250.1	1.1e-07	34.88	indeterminate(ID)-domain 16	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR34946:SF2	OS03G0310200 PROTEIN	coord: 1..167
IPR039288	Zinc finger protein SHOOT GRAVITROPISM 5-like	PANTHER	PTHR34946	OS03G0310200 PROTEIN	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015654.1	Tan0015654.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
cellular_component	GO:0005634	nucleus