![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Tan0015606 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTGGTGGTGGAAAACTTGACTGGTTCTCTGTTCTACGTTCAGGTTGAAGACGATGCCACGGTTTTTGATCTTAGAAGCGAGATCAGTTCTCAACAGAACCTCCCTTCTGACCGTCTGATCTTTGTTTCCGACGACAATCGTGGCCGTCTGATCTCTGACGACGATGATGGAATCTCGCTCGTTGATTTTGGCGTCCGAGATGGGTCCCACATTTACATCTTTTTCTGTCCCCTTGATGACGATGATGGCGATGATCGTGATGCTCGGCAGCTCTTCTTTACCTGTCCTGATCTTCTTCTCTTCGAGTAG ATGAAATTGGTGGTGGAAAACTTGACTGGTTCTCTGTTCTACGTTCAGGTTGAAGACGATGCCACGGTTTTTGATCTTAGAAGCGAGATCAGTTCTCAACAGAACCTCCCTTCTGACCGTCTGATCTTTGTTTCCGACGACAATCGTGGCCGTCTGATCTCTGACGACGATGATGGAATCTCGCTCGTTGATTTTGGCGTCCGAGATGGGTCCCACATTTACATCTTTTTCTGTCCCCTTGATGACGATGATGGCGATGATCGTGATGCTCGGCAGCTCTTCTTTACCTGTCCTGATCTTCTTCTCTTCGAGTAG ATGAAATTGGTGGTGGAAAACTTGACTGGTTCTCTGTTCTACGTTCAGGTTGAAGACGATGCCACGGTTTTTGATCTTAGAAGCGAGATCAGTTCTCAACAGAACCTCCCTTCTGACCGTCTGATCTTTGTTTCCGACGACAATCGTGGCCGTCTGATCTCTGACGACGATGATGGAATCTCGCTCGTTGATTTTGGCGTCCGAGATGGGTCCCACATTTACATCTTTTTCTGTCCCCTTGATGACGATGATGGCGATGATCGTGATGCTCGGCAGCTCTTCTTTACCTGTCCTGATCTTCTTCTCTTCGAGTAG MKLVVENLTGSLFYVQVEDDATVFDLRSEISSQQNLPSDRLIFVSDDNRGRLISDDDDGISLVDFGVRDGSHIYIFFCPLDDDDGDDRDARQLFFTCPDLLLFE Homology
BLAST of Tan0015606 vs. NCBI nr
Match: XP_022989504.1 (uncharacterized protein LOC111486561 [Cucurbita maxima]) HSP 1 Score: 171.0 bits (432), Expect = 5.3e-39 Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 0
BLAST of Tan0015606 vs. NCBI nr
Match: KAG6589175.1 (hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164.5 bits (415), Expect = 5.0e-37 Identity = 81/104 (77.88%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of Tan0015606 vs. NCBI nr
Match: XP_022930696.1 (uncharacterized protein LOC111437093 [Cucurbita moschata]) HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36 Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of Tan0015606 vs. NCBI nr
Match: KGN43536.1 (hypothetical protein Csa_020453 [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 7.0e-31 Identity = 77/107 (71.96%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Tan0015606 vs. NCBI nr
Match: XP_022136124.1 (uncharacterized protein LOC111007894 [Momordica charantia]) HSP 1 Score: 138.7 bits (348), Expect = 2.9e-29 Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of Tan0015606 vs. ExPASy TrEMBL
Match: A0A6J1JPI4 (uncharacterized protein LOC111486561 OS=Cucurbita maxima OX=3661 GN=LOC111486561 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.6e-39 Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 0
BLAST of Tan0015606 vs. ExPASy TrEMBL
Match: A0A6J1ERN4 (uncharacterized protein LOC111437093 OS=Cucurbita moschata OX=3662 GN=LOC111437093 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 7.1e-37 Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of Tan0015606 vs. ExPASy TrEMBL
Match: A0A0A0K6V6 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044270 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.4e-31 Identity = 77/107 (71.96%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Tan0015606 vs. ExPASy TrEMBL
Match: A0A6J1C3E5 (uncharacterized protein LOC111007894 OS=Momordica charantia OX=3673 GN=LOC111007894 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.4e-29 Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of Tan0015606 vs. ExPASy TrEMBL
Match: A0A4P1RCV9 (Ubiquitin-like domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_03098 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22 Identity = 57/102 (55.88%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Tan0015606 vs. TAIR 10
Match: AT2G32360.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 3.3e-10 Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|