Tan0015564 (gene) Snake gourd v1

Overview


Name	Tan0015564
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L28-2-like
Location	LG11: 27512611 .. 27514208 (-)
RNA-Seq Expression	Tan0015564
Synteny	Tan0015564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACAGTTCTAGGAAAACTCATTTGGGAGATTGTGAAGAGGAACAACTTGTTTTTTATGAAGGAGTTTGGGTAGGGAACAACCGACGTTCAGTTCAGCAAGGAGTCTAACAACTTGTACAATCTAAACTCCTACAAGTACTCTGATTTGGCCAACAAGAAAACTGTTACAATTCAACTGGGAGGCAAAGATCAATCAATTTTGCTTGCAACAACTAAGAACAAGAAACAGAACAAACCTTCTTCATTGCTTCATAAATCTTTGATAAAGAAAGAGTTTCGACTGAACCAAATCTGCAACCACTCTCGCTTTCAAGGGGCTCACGTCCATCGCCACCAAGACCGACGGTGGAGCCTTCCCCGATGGGATCTCGTTGAACTCCTCGTCTCCACCAACGATCTTCTCCTATCCTCTCTTGTTCGGAGAGTGAATTGGTCGAAGACAGAACATCAATGGAGCAGGTTGTAAGGAAATCAAGAAATTAGGTTAGGGCTTGAAGATGTGGGAGAATGTGGGAGGCAGGAGGCGTGAATGAGAGGAATAAATGTGAGAGAGAAGGTAAATGGAAGGTTTTGTTTCGTGAAAAAAATAAGGGGGAGCGCGCGGGGAAGATAAAATTTTAAGCCCGCCCAATCAAATTTTTATAGCATTTTATATAAATGCTATAATTAAAAACTATTGTACCTCTCATTTGTTGCAGTGATAGTTTAATATAAAATAAGATTCATAATAAACTATATTATAGCCTAATTAATTAATTAGGGCTAATTTGGAGAAATTGAATTGAGAGAAATTAAATTGAATATGATTCAATTTAAAATTCCACAATTATGCAAATATGATTTGTATAATAAGGTATGAGATACCTTACATTATGTGATATGCAAATATGACTTGCATATCATATGATTGTGGTAAAATGGTGAATTAATGGTGTAACGACCCAGATTATTCAAGTACCCTTTAGGTTGTACTTTGGATTAATTTATTGGAAAATACTCAAGTGGGCCTTAGAATATATAGTTTGATTTAGTCCTATGTGGAAACTAAGAGAATTAAAGGATTTGAAGTTTTAATTAAGCTTTAGGGCAAAGTTGTGATTTTAGAGAAGAAGAAGGGCATTTTTTGTAGTTTTCTCTAAAATGAAGGGTACTTTAGAGAAAAGAAGAAAAAGAGAATTAGGGTTTCTAATTGGTGAAACATTTGTCCTTTTGATTGCACGCCTTCCAAGGAAGCCACTTTCTCCTTCCCTTTCACATGTGGTAGCCGACAACTCCCCCTTCCTTCAACCCACAAGTCGCCGGCGAGGACACCACTGAAGCTGCACGACATCCTTTACTTCACGCCGACAGAGACGAGCACACCGCCATCGTCAGAAGGCGTTCTGTCGACCCGGTGACAAACTCCTTCGGTCGACTCCCGCAACCGAGACTGCAACACGACTCTCACCGCCGAACGAATCATCGGTATCGCGCGAGTTAAGGGTCGGAAGTCGTAGCCGCTGTCGGAAGGTGGTGCGAGCACTGAAGCTTCGTCGATGTCCAGTGGGTCGCGTGCCGCCTGAAGTCGTGCAACCCAGCTGCCGGAATTTCTGA

mRNA sequence

ATGGCGACAGTTCTAGGAAAACTCATTTGGGAGATTGTGAAGAGGAACAACTTGTTTTTTATGAAGGACAAGGAGTCTAACAACTTGTACAATCTAAACTCCTACAAGTACTCTGATTTGGCCAACAAGAAAACTGTTACAATTCAACTGGGAGGCAAAGATCAATCAATTTTGCTTGCAACAACTAAGAACAAGAAACAGAACAAACCTTCTTCATTGCTTCATAAATCTTTGATAAAGAAAGAGTTTCGACTGAACCAAATCTGCAACCACTCTCGCTTTCAAGGGGCTCACACTGCAACACGACTCTCACCGCCGAACGAATCATCGGTATCGCGCGAGTTAAGGGTCGGAAGTCGTAGCCGCTGTCGGAAGGTGGTGCGAGCACTGAAGCTTCGTCGATGTCCAGTGGGTCGCGTGCCGCCTGAAGTCGTGCAACCCAGCTGCCGGAATTTCTGA

Coding sequence (CDS)

ATGGCGACAGTTCTAGGAAAACTCATTTGGGAGATTGTGAAGAGGAACAACTTGTTTTTTATGAAGGACAAGGAGTCTAACAACTTGTACAATCTAAACTCCTACAAGTACTCTGATTTGGCCAACAAGAAAACTGTTACAATTCAACTGGGAGGCAAAGATCAATCAATTTTGCTTGCAACAACTAAGAACAAGAAACAGAACAAACCTTCTTCATTGCTTCATAAATCTTTGATAAAGAAAGAGTTTCGACTGAACCAAATCTGCAACCACTCTCGCTTTCAAGGGGCTCACACTGCAACACGACTCTCACCGCCGAACGAATCATCGGTATCGCGCGAGTTAAGGGTCGGAAGTCGTAGCCGCTGTCGGAAGGTGGTGCGAGCACTGAAGCTTCGTCGATGTCCAGTGGGTCGCGTGCCGCCTGAAGTCGTGCAACCCAGCTGCCGGAATTTCTGA

Protein sequence

MATVLGKLIWEIVKRNNLFFMKDKESNNLYNLNSYKYSDLANKKTVTIQLGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEFRLNQICNHSRFQGAHTATRLSPPNESSVSRELRVGSRSRCRKVVRALKLRRCPVGRVPPEVVQPSCRNF

Homology

[Close]

BLAST of Tan0015564 vs. ExPASy Swiss-Prot
Match: Q9M0E2 (60S ribosomal protein L28-2 OS=Arabidopsis thaliana OX=3702 GN=RPL28C PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-23
Identity = 58/94 (61.70%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMK-----------DKESNNLYNLNSYKYSDLANKKTVTIQ 60
          MATV G+LIWEIVKRNN F +K            KESNNL N+NSYK+S LANKKTVTIQ
Sbjct: 1  MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
            GKDQ ++L TTK K+QNKP   ++KS++KKEF
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEF 94

[Close]

BLAST of Tan0015564 vs. ExPASy Swiss-Prot
Match: O82204 (60S ribosomal protein L28-1 OS=Arabidopsis thaliana OX=3702 GN=RPL28A PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.4e-21
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMK-----------DKESNNLYNLNSYKYSDLANKKTVTIQ 60
          MATV G+LIWEIVK NN F +K            KE+NNL N++SYK+S LANKKTVTIQ
Sbjct: 1  MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
             KDQ+++LATTK KKQNKP   ++KS++KKEF
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEF 94

[Close]

BLAST of Tan0015564 vs. NCBI nr
Match: XP_038886678.1 (60S ribosomal protein L28-2-like [Benincasa hispida])

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-26
Identity = 72/95 (75.79%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
          MA V G+LIWEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1  MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEFR 85
           GGKDQSILLATTK+KKQNKPSSLLHKSL+KKEFR
Sbjct: 61 PGGKDQSILLATTKSKKQNKPSSLLHKSLMKKEFR 95

[Close]

BLAST of Tan0015564 vs. NCBI nr
Match: XP_022949503.1 (60S ribosomal protein L28-2-like [Cucurbita moschata] >XP_022998347.1 60S ribosomal protein L28-2-like [Cucurbita maxima] >XP_023523885.1 60S ribosomal protein L28-2-like [Cucurbita pepo subsp. pepo] >KAG7036445.1 60S ribosomal protein L28-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-26
Identity = 71/95 (74.74%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
          MA V G+LIWEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1  MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEFR 85
           GGKDQSIL ATTK+KKQNKPSSLLHKSL+KKEFR
Sbjct: 61 PGGKDQSILFATTKSKKQNKPSSLLHKSLMKKEFR 95

[Close]

BLAST of Tan0015564 vs. NCBI nr
Match: XP_022956223.1 (60S ribosomal protein L28-2-like [Cucurbita moschata] >XP_022980747.1 60S ribosomal protein L28-2-like [Cucurbita maxima] >XP_023529098.1 60S ribosomal protein L28-2-like [Cucurbita pepo subsp. pepo] >KAG7018296.1 60S ribosomal protein L28-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-26
Identity = 69/94 (73.40%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
          MA V G+L+WEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1  MAAVSGQLVWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
           GGKDQS+LLATTK+KKQNKPSSLLHKSL+KKEF
Sbjct: 61 PGGKDQSVLLATTKSKKQNKPSSLLHKSLLKKEF 94

[Close]

BLAST of Tan0015564 vs. NCBI nr
Match: KAG6606729.1 (hypothetical protein SDJN03_00071, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-26
Identity = 71/95 (74.74%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 1    MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
            MA V G+LIWEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1464 MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 1523

Query: 61   LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEFR 85
             GGKDQSIL ATTK+KKQNKPSSLLHKSL+KKEFR
Sbjct: 1524 PGGKDQSILFATTKSKKQNKPSSLLHKSLMKKEFR 1558

[Close]

BLAST of Tan0015564 vs. NCBI nr
Match: KAG6581862.1 (hypothetical protein SDJN03_21864, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-26
Identity = 69/94 (73.40%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 1    MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
            MA V G+L+WEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1943 MAAVSGQLVWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 2002

Query: 61   LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
             GGKDQS+LLATTK+KKQNKPSSLLHKSL+KKEF
Sbjct: 2003 PGGKDQSVLLATTKSKKQNKPSSLLHKSLLKKEF 2036

[Close]

BLAST of Tan0015564 vs. ExPASy TrEMBL
Match: A0A6J1IS47 (60S ribosomal protein L28-2-like OS=Cucurbita maxima OX=3661 GN=LOC111480021 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26
Identity = 69/94 (73.40%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
          MA V G+L+WEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1  MAAVSGQLVWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
           GGKDQS+LLATTK+KKQNKPSSLLHKSL+KKEF
Sbjct: 61 PGGKDQSVLLATTKSKKQNKPSSLLHKSLLKKEF 94

[Close]

BLAST of Tan0015564 vs. ExPASy TrEMBL
Match: A0A6J1K7P5 (60S ribosomal protein L28-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493014 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26
Identity = 71/95 (74.74%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
          MA V G+LIWEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1  MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEFR 85
           GGKDQSIL ATTK+KKQNKPSSLLHKSL+KKEFR
Sbjct: 61 PGGKDQSILFATTKSKKQNKPSSLLHKSLMKKEFR 95

[Close]

BLAST of Tan0015564 vs. ExPASy TrEMBL
Match: A0A6J1GW79 (60S ribosomal protein L28-2-like OS=Cucurbita moschata OX=3662 GN=LOC111457983 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26
Identity = 69/94 (73.40%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
          MA V G+L+WEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1  MAAVSGQLVWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
           GGKDQS+LLATTK+KKQNKPSSLLHKSL+KKEF
Sbjct: 61 PGGKDQSVLLATTKSKKQNKPSSLLHKSLLKKEF 94

[Close]

BLAST of Tan0015564 vs. ExPASy TrEMBL
Match: A0A6J1GC99 (60S ribosomal protein L28-2-like OS=Cucurbita moschata OX=3662 GN=LOC111452830 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.2e-26
Identity = 71/95 (74.74%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
          MA V G+LIWEIVKRNN F +K+           KESNNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1  MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKESNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEFR 85
           GGKDQSIL ATTK+KKQNKPSSLLHKSL+KKEFR
Sbjct: 61 PGGKDQSILFATTKSKKQNKPSSLLHKSLMKKEFR 95

[Close]

BLAST of Tan0015564 vs. ExPASy TrEMBL
Match: A0A1S3BIE3 (60S ribosomal protein L28-2-like OS=Cucumis melo OX=3656 GN=LOC103490001 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 8.2e-26
Identity = 85/150 (56.67%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 1   MATVLGKLIWEIVKRNNLFFMKD-----------KESNNLYNLNSYKYSDLANKKTVTIQ 60
           MA V G+LIWEIVKRNN F +K+           KE NNLYNLNSYK+S LANKKTVTIQ
Sbjct: 1   MAAVPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKEPNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61  LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEFR------LNQIC-NHSRFQGAHTA-T 120
            GGKDQSILLATTK+KKQNKPSSLLHKSL+KKEFR       NQ+  N+ R      A  
Sbjct: 61  PGGKDQSILLATTKSKKQNKPSSLLHKSLMKKEFRRMAKAVTNQVADNYYRPDLKKAALA 120

Query: 121 RLSPPNESSVSRELRVGSRSRCRKVVRALK 132
           RLS  N S   +  + G + R R+ +++ K
Sbjct: 121 RLSAVNRS--LKVAKSGVKKRNRQALKSKK 148

[Close]

BLAST of Tan0015564 vs. TAIR 10
Match: AT4G29410.1 (Ribosomal L28e protein family )

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24
Identity = 58/94 (61.70%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMK-----------DKESNNLYNLNSYKYSDLANKKTVTIQ 60
          MATV G+LIWEIVKRNN F +K            KESNNL N+NSYK+S LANKKTVTIQ
Sbjct: 1  MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
            GKDQ ++L TTK K+QNKP   ++KS++KKEF
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEF 94

[Close]

BLAST of Tan0015564 vs. TAIR 10
Match: AT4G29410.2 (Ribosomal L28e protein family )

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24
Identity = 58/94 (61.70%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMK-----------DKESNNLYNLNSYKYSDLANKKTVTIQ 60
          MATV G+LIWEIVKRNN F +K            KESNNL N+NSYK+S LANKKTVTIQ
Sbjct: 1  MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
            GKDQ ++L TTK K+QNKP   ++KS++KKEF
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEF 94

[Close]

BLAST of Tan0015564 vs. TAIR 10
Match: AT2G19730.1 (Ribosomal L28e protein family )

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-22
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMK-----------DKESNNLYNLNSYKYSDLANKKTVTIQ 60
          MATV G+LIWEIVK NN F +K            KE+NNL N++SYK+S LANKKTVTIQ
Sbjct: 1  MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
             KDQ+++LATTK KKQNKP   ++KS++KKEF
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEF 94

[Close]

BLAST of Tan0015564 vs. TAIR 10
Match: AT2G19730.2 (Ribosomal L28e protein family )

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-22
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMK-----------DKESNNLYNLNSYKYSDLANKKTVTIQ 60
          MATV G+LIWEIVK NN F +K            KE+NNL N++SYK+S LANKKTVTIQ
Sbjct: 1  MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
             KDQ+++LATTK KKQNKP   ++KS++KKEF
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEF 94

[Close]

BLAST of Tan0015564 vs. TAIR 10
Match: AT2G19730.3 (Ribosomal L28e protein family )

HSP 1 Score: 102.8 bits (255), Expect = 2.4e-22
Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MATVLGKLIWEIVKRNNLFFMK-----------DKESNNLYNLNSYKYSDLANKKTVTIQ 60
          MATV G+LIWEIVK NN F +K            KE+NNL N++SYK+S LANKKTVTIQ
Sbjct: 1  MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 61 LGGKDQSILLATTKNKKQNKPSSLLHKSLIKKEF 84
             KDQ+++LATTK KKQNKP   ++KS++KKEF
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEF 94

The following BLAST results are available for this feature:

BLAST of Tan0015564 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0E2	8.2e-23	61.70	60S ribosomal protein L28-2 OS=Arabidopsis thaliana OX=3702 GN=RPL28C PE=2 SV=1	[more]
O82204	3.4e-21	59.57	60S ribosomal protein L28-1 OS=Arabidopsis thaliana OX=3702 GN=RPL28A PE=1 SV=1	[more]

BLAST of Tan0015564 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886678.1	1.5e-26	75.79	60S ribosomal protein L28-2-like [Benincasa hispida]	[more]
XP_022949503.1	4.4e-26	74.74	60S ribosomal protein L28-2-like [Cucurbita moschata] >XP_022998347.1 60S riboso...	[more]
XP_022956223.1	4.4e-26	73.40	60S ribosomal protein L28-2-like [Cucurbita moschata] >XP_022980747.1 60S riboso...	[more]
KAG6606729.1	4.4e-26	74.74	hypothetical protein SDJN03_00071, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6581862.1	4.4e-26	73.40	hypothetical protein SDJN03_21864, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Tan0015564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IS47	2.2e-26	73.40	60S ribosomal protein L28-2-like OS=Cucurbita maxima OX=3661 GN=LOC111480021 PE=...	[more]
A0A6J1K7P5	2.2e-26	74.74	60S ribosomal protein L28-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493014 PE=...	[more]
A0A6J1GW79	2.2e-26	73.40	60S ribosomal protein L28-2-like OS=Cucurbita moschata OX=3662 GN=LOC111457983 P...	[more]
A0A6J1GC99	2.2e-26	74.74	60S ribosomal protein L28-2-like OS=Cucurbita moschata OX=3662 GN=LOC111452830 P...	[more]
A0A1S3BIE3	8.2e-26	56.67	60S ribosomal protein L28-2-like OS=Cucumis melo OX=3656 GN=LOC103490001 PE=3 SV...	[more]

BLAST of Tan0015564 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29410.1	5.8e-24	61.70	Ribosomal L28e protein family	[more]
AT4G29410.2	5.8e-24	61.70	Ribosomal L28e protein family	[more]
AT2G19730.1	2.4e-22	59.57	Ribosomal L28e protein family	[more]
AT2G19730.2	2.4e-22	59.57	Ribosomal L28e protein family	[more]
AT2G19730.3	2.4e-22	59.57	Ribosomal L28e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.390.110		coord: 1..120 e-value: 2.2E-20 score: 75.2
None	No IPR available	PANTHER	PTHR10544:SF19	60S RIBOSOMAL PROTEIN L28-1-LIKE	coord: 1..133
IPR029004	Ribosomal L28e/Mak16	PFAM	PF01778	Ribosomal_L28e	coord: 8..91 e-value: 5.1E-16 score: 59.4
IPR002672	Ribosomal protein L28e	PANTHER	PTHR10544	60S RIBOSOMAL PROTEIN L28	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015564.1	Tan0015564.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome