Tan0015476 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTATTTTTCTCCATTTCACATTCTTTTTAAGCTAAATAACAAATAAAGAATAAATATTACCCCCAAATTTCAAATCCCTCTGTTTTTCTCTTCAATGGATTTGAGTTGTTTAATTAGGTGCTCCGGCGGCGGCGGGCGTGGGTACGTGAAAAGAGGGCAGTACACGGCGGTGGCAGTGGCGGTTTTGGGGCGCAGGTCGCCGGAGAAGACGACGGCGAGATGGAGAGTTCTGTGGCGGAGGCTAAAGAAGGAGAAGAAGAGAATGTTCAGCTGCGGTTCGAGCGGAACACGTGAGGCGCACGTGCCGTATAATCCAGAGACGTATTTGCAGAACTTCGATGAAAGCTCGGAGATGATGATCGGAGACGATCCTGACGCGATTTCTCGATCTTTCTCAGCTCGTTTCGCCATTTCTTCTTCAGTCATTTTGAAACGGCCGCCTGAATTTTTGGTTCAAAAGGTTAAAGTTTAGTGAATTTGTTCTTCAAAAGAAGTTTGTGTTAATTACAGACTCTGTTTATAAATGTCAGAAATCAGAATGGTTTCTTTTTTTCCTTTCTCC CTTTATTTTTCTCCATTTCACATTCTTTTTAAGCTAAATAACAAATAAAGAATAAATATTACCCCCAAATTTCAAATCCCTCTGTTTTTCTCTTCAATGGATTTGAGTTGTTTAATTAGGTGCTCCGGCGGCGGCGGGCGTGGGTACGTGAAAAGAGGGCAGTACACGGCGGTGGCAGTGGCGGTTTTGGGGCGCAGGTCGCCGGAGAAGACGACGGCGAGATGGAGAGTTCTGTGGCGGAGGCTAAAGAAGGAGAAGAAGAGAATGTTCAGCTGCGGTTCGAGCGGAACACGTGAGGCGCACGTGCCGTATAATCCAGAGACGTATTTGCAGAACTTCGATGAAAGCTCGGAGATGATGATCGGAGACGATCCTGACGCGATTTCTCGATCTTTCTCAGCTCGTTTCGCCATTTCTTCTTCAGTCATTTTGAAACGGCCGCCTGAATTTTTGGTTCAAAAGGTTAAAGTTTAGTGAATTTGTTCTTCAAAAGAAGTTTGTGTTAATTACAGACTCTGTTTATAAATGTCAGAAATCAGAATGGTTTCTTTTTTTCCTTTCTCC ATGGATTTGAGTTGTTTAATTAGGTGCTCCGGCGGCGGCGGGCGTGGGTACGTGAAAAGAGGGCAGTACACGGCGGTGGCAGTGGCGGTTTTGGGGCGCAGGTCGCCGGAGAAGACGACGGCGAGATGGAGAGTTCTGTGGCGGAGGCTAAAGAAGGAGAAGAAGAGAATGTTCAGCTGCGGTTCGAGCGGAACACGTGAGGCGCACGTGCCGTATAATCCAGAGACGTATTTGCAGAACTTCGATGAAAGCTCGGAGATGATGATCGGAGACGATCCTGACGCGATTTCTCGATCTTTCTCAGCTCGTTTCGCCATTTCTTCTTCAGTCATTTTGAAACGGCCGCCTGAATTTTTGGTTCAAAAGGTTAAAGTTTAG MDLSCLIRCSGGGGRGYVKRGQYTAVAVAVLGRRSPEKTTARWRVLWRRLKKEKKRMFSCGSSGTREAHVPYNPETYLQNFDESSEMMIGDDPDAISRSFSARFAISSSVILKRPPEFLVQKVKV Homology
BLAST of Tan0015476 vs. NCBI nr
Match: KAG7036482.1 (hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.1 bits (427), Expect = 2.4e-38 Identity = 88/124 (70.97%), Postives = 101/124 (81.45%), Query Frame = 0
BLAST of Tan0015476 vs. NCBI nr
Match: KAG6606769.1 (hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169.1 bits (427), Expect = 2.4e-38 Identity = 88/126 (69.84%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of Tan0015476 vs. NCBI nr
Match: GAY51209.1 (hypothetical protein CUMW_132530 [Citrus unshiu]) HSP 1 Score: 88.6 bits (218), Expect = 4.2e-14 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Tan0015476 vs. NCBI nr
Match: KDO51221.1 (hypothetical protein CISIN_1g044132mg [Citrus sinensis]) HSP 1 Score: 87.4 bits (215), Expect = 9.3e-14 Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Tan0015476 vs. NCBI nr
Match: XP_031250243.1 (uncharacterized protein LOC116108094 [Pistacia vera]) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13 Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of Tan0015476 vs. ExPASy TrEMBL
Match: A0A2H5PFR9 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_132530 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 2.0e-14 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Tan0015476 vs. ExPASy TrEMBL
Match: A0A067EJZ4 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g044132mg PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 4.5e-14 Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Tan0015476 vs. ExPASy TrEMBL
Match: B9RQR2 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1495350 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13 Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Tan0015476 vs. ExPASy TrEMBL
Match: V4ST02 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026796mg PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.7e-13 Identity = 47/101 (46.53%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Tan0015476 vs. ExPASy TrEMBL
Match: A0A6P3YT23 (uncharacterized protein LOC107404700 OS=Ziziphus jujuba OX=326968 GN=LOC107404700 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.8e-13 Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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