Tan0015443 (gene) Snake gourd v1

Overview


Name	Tan0015443
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DNA-directed RNA polymerase III subunit RPC5
Location	LG01: 12743085 .. 12757347 (+)
RNA-Seq Expression	Tan0015443
Synteny	Tan0015443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAGGGAAAATTATTTGGGCGGCCGAACAAGTTATTCATCTCCGCCGGAGCAGTTGCTGGCGAGTTAAGCTGCTTGATTACATATTAGAACAAAAAACTCACCTTCTTCATCGGCTCTTTCGAGTCCGAGAACTTCAAACAGTTGCAGAAGCTTTTCACTCTTCTCATTCACTAAGAGAGAGGAACGCGTTGAAACCTTCAGGATGGACCTGGACGACCTAGACGAACCGAGCCAGGTACCATCACGAACCTCCAGATTCGCCCCCAAGAACTCTAAATTCAAGCCCAAGCCGAAATCGGAAGCAGTTCCAAAACCGGAGGCCCAACAGCCGCCAGCGAAGCCAGAACCTCAGCCTCCCGTCTCGAAGTCGGAAGTTGACGAGCCGGATGCTCGAATTGGGGAGAAGAAGGAAGAAGGTGAAGAAGTTGAACTGAAACCTAAAGTTGAACCCTTGCTTCCTAATGGAGTTGCTAAAATGGACGTCGAAACTAAGTCCGAAGTTGAAGAGGAGACAATGGTGGATGATGATCCAATGGAAGAGGATGCTTCTGAAGATATGGTGGTTCGTGAAATCGACGTTCTGTTTACTCCTTCAGCTGACATCAATTCGAAAGTTAGCATTCCTTGCTTTTGTTATTTCATGCCCTGTGTACCATTTTTTTTTCTTTCTTTACATTCAGTCCATTTCGAAACTTTAACTTGACAAGCATCTATCTTCAGTTATATGTATTACAATATCCCCTGAGACCACGCTGGAGGCCTTATGAATTTGAGGGGCGATGTGAAGAGGTGAGCATTTTCTTGTATTCCTTTTTATTCTAGAAGAATTTGAAGTATAATCTTTTAGTTTTAACAGGTGAGAGTTAAACCTAGCAGTGGAGAAGTGGAAGTCGATCTGAATGTTGATATTGAATCCAATAACTATGACAGTAAAGCTGAAGGTAGTTTGCAAATGAAGAAGCAGGTATCTTCTCTTATAGTTCTATTGATTACTAGTCTATATTAAAATTGCTGTTAATGTTAAGGTACCTGGGGTATTTGGGGTTTATTAGTTTACTGGTAGTCCACTTGTATGATTAAACTTGCAGATCATGCCAGATTTAACTTGAAAAACATGTTACATTCTGTAGTTTTTTTTTTTCCGTCCAAAAGATAAAAAAAATTCTAGTTTTATTGAACCAAATTCGGCAATAGTTTCTAGTTGCATCTAAGTTCCTTTCTTTCTTGTTTTCCCCTGTCGTATTAGTCTCGAGTGTTTTTTTCTCACTTGGTGAACTAAGTTTCACCTGGTAATAGAGTTATTTCTTTCATGTGCTATATTCAACTGAGGATCGAGTTATTGTTGGCGCTTTATTTTTGTGGTTACCAACAAAAGCTTGTTTTTGGCTCAGACTTTGGCATCTTCATGGCATCCACCTCTAGCAACTACGTATGCTGTTGGGCTTCTTACGGGTAATCAGGTTGCTTCTATATCTTACATGTTCTGAGCTTCACTCTTTTTTTGACATTGAATCTCCTGTTGTTGATGGACCCTCTGTTTGTTTGTTGTTCTGGTACATGGTTTATTCTTAATGGCATGGCTTATTACCTCTATATCTATTAAATTATCCATTCATCAGAGTAGAAGAAATGTCTTGTTTGTTCATTTGTTTACATTGATTTTGTATTTGTTTTTTGTTCACAAAGAAACAAAACTTTTCATTGCTTTTGTTTTTTGTTTACAAAGAACCACCATGTGTTGACCTAGTGATTAGTAAGGGTAGATGTCAATAGAACATGGTTTAGAGAGAATAGGTTCAAGTCATAGTGGCCACCTACTTATGATTTGATATACTACGAATTTCATTGGTAACCAAATATAGTAGGGTCCGACAAATATCTCATAGTCGAGGTGCATCCAAGTTGGTCTAAATGCTCATGAATATAAAAGAAAGGATATTTGAGAAGTTACAAAGCCATAACTGGATCAATAATCTAAACCACCCAAAGTAAGAAAATTAATTACAAACGCAATACTTCCCACTCTGAAGCCAAACCCTACAACTCAAAAAGCTTTCCAATAAGAATGAATATTAAAAGAGGAATAATTACAAAACACTTTAGCCTTAGCACATCAAGAAGTCGCATTTAGCTTAATAATATCACATATCCAACTAAGGAGCTTGTTTGTCTTCAAATAAATGCTTACTCTTTTCCAACTGAATACCCCCACAAAATTAACTTGACCATATATATCCATAGAATTTTTGCTGCCTTCTTGAAACTCTGATCGGAAGGAGTTGGAAAAGATATATTTCAACTTTCCAATTGAATAGCCACAAACATCCAAATCCTTGCAGCGACCACCATCATATATTCCTACTGCAGGAGCTACGAGAACAAACTCTGAAGGTCCTCCTCAGCATTTTAGGCACAACATGCACCAGCTCGGATTCAAAGACCAAAATGGACATTTGTTATAATTTTATCTACCATATTTAGACTTTCCAAGAAAATCAACTATGATAAATATTTACGTTTCTTGGTTTGATTTCCACAAAGCTAACCCAAATAATTTAGGAAGGGAAGGTGCCTGCTACTAGCTCTCAGACTGGTGATTTTACTGTCAATGTTCCTGAATTACCCAATTTCTAGCTTCTCTATAGTGTTAGTGCTGAACTTCGCATGTTAGATTATATGCGTTCGATTGTAAATGAGAAATTGCAAGACGCTGAAAACAAATGCCCTTTTATTTGGAGGAATTGATCTATGTTCTTTTACATTCAACCACCGTTTAAAATTACTATCAGTGATCTCAGGAAGATGTTATAATCTAATTGACATATGGAATGTGAAAAGGAGGGTAGTTAATTCTGTATTTTGACGTCGTATGCAGCTTATCATAGAAACTTCAAGGTATCTAAGCTCTCAGATCAGCCCCTGTCTAACTTTAATCTTTGTATCACCTGTCAGATATGTAATCAAATTTCAGAGAGAATGTTTAACACGAACATCACTTCATCTCTGAGTCTAACGTTGTACTGAAGAATAAAAAGTTATGCTTCTGTTCTTGTGAAAGTATCCTTTGGGCTGAGAACACAAACTAAACTTGTATTTTGTATGGGTGAATTAAGAATGTTGCACCCTGCAGGATCTCATATTATTGTATTTGTAATTGATTGAATGGGAAACCTAGCTTTTGTACTTTGTAAAGTTGGTTTTCTTCTTACTAATTATAATGAACGTAAGAAGATTATAGGTTCTTATGCATTCCCCTAATTTACATTATGATTGTCAAAATATTTTTTGATTTCTAGCACAGCGATTTGTTTGTTTCTATTTGTTTTTAAAAATAAATAACTATTGATAGTGTGTTCATGGGTTATATTGCAGCTACACCTGAATCCCATACATGCAGTCGTGCAACTTCGGCCATCATTTGAACACCTTAATTCTGGTGGCCCAAAGAGGAAAAACAATGTTAGAGCTGATCCAGATGTTAAGTCGGAAGAGCCTACAGATGTTAACTCTGCAGTTGCAGCAAGGAAGCAGGTTATTCTCTATTTTTCTATTCAACACTAAAACTGCTGAAATATACTCAAAACTATCTTGGAAAATCTGCTGATCATGTTTATTTGGAGACTGTAAAGTAATCAAAATTATTATTAATTCAAAATATATCTATATTTTGCCTCTAGACATTATCCATGTGATAAGCACATTGATATAGCACTAGCAAACATATTTGGGTAGGAAGAGATCTTACAGGGTTATACAATAGAGCTCTAAAGTACAAATTCTAATGTGCGCAGCTGTAGATTAGATATTGTTCTCCACATTTTACAGCCCTTGCCTCTTAGTAGCACTTTAGCAATTTGAGCCTAGACATCTAGCTACATGATAGAATTCATGGTGAGAAGGATAGTACAATCATCAATTAATAATTTGTTAGAATATTATTTAGAATTAATATATGAGTGGTAGTTTTTTCCATTGGGAAAGGGACTGAGTGCCAGGGAGGAGGTAGGCAGAATTTGGGAAATGATCAAAGAGATGCTGCTCTCAATAAGACCGTTCTTTTATGGTGGCAAGTGGCAACTTTCCATTTTTACCTTGTATGTACCGTTTCCTGTCTTGATATGTACCAAGATAATCCTATCAAAGTGCTATTTGGGCATCAATTATGGTTTTGGTTATGGTAAAAGAGAATGTTAATGCATGATTAAACTTTTTAAAACGGATTCTCAACATATCTGAGAGCAAATGACAAGAAATTCATTCAGTCAAGTGATGGGCCTCAGATTACAAAAGTGTATACTTTGCTAGCAGTGAGGAAGGGGGTGGATGTGTAAGGAGAGTCTCTGTGTGATTGTGTGCGGCCCATATTATCTTGTTAGGAGGGGTATCTTTTTGCTGTTATTTTGTAGACTCTCTGTTGAGAAGTGGGAGAGGTGGGGAGCTCTCAGATCTCTCTTGGTTATCATGTTCATAAATAAAATTGTTGGCCAAGGCCTATCATCAAGGTCTATGCTAGCTCAATATTTAGGAGGAACTAGGAAGGTCCAAAATATGCTTGATAATGTGAAACGGTTTAAATAAAAGTTGTACTCATGGCCATTAGCTATTTAGGTAGAAACCATCAACAGGCAAGTGTTGTTGAAGGCTTATCATCTTTGGTAAGAAACCTTTATATTACAATTGGGCTCAAGCAAGGATGTTGATCATAGGTATTTTCCGCTAGAAACCATGACAACCCAATTGACTCTACAAGTACATGTTAATTCGTTGGTGCACTAAGATGACAGCATTGATGGTGGTGTTGCAGTGTGTGGGTTTGCATGGAGAAAATCCCTTAAGGGGGGGAGACTCATGGTTGGTCTTTGCAAAAAGAAAATCCTAGTAGTCGGAGTCGCATTCAATTTTCCTGTTAATATGGTATAGGGTTTGGAGGAGGATTTTGTGGTCAGGCTTCATAGGAAACACAAAGCAATAGTGGATGAAATCCAACAAAATCAATGGTTTAATTTGCAGTAGCTAAAGTAAGGGAGGAATTTTAGGACCAACAAACATTTGTTGTATTTGCTCCAAGCATACCCCCTCAAGATAGGAACCATTTGCGGCTCAGTTGTAGATGGTAGAGAACATATTCCAATGGTTAAAGGTGTTATTAAAGGGGTGTTTGGCGCAAGGAGTAGGAGTTAGAATGTATGGAGTTGTTTTGTCTTGGGAGTTGGAGAAGGAGTTAATAAGTTTGTGGGGCCCACAAGATGGAGTTGAATGAAGAGTAAATATGTTTGTGGGGCACACAATAGGAGTTTAAAAATGCTTGGGACAAACAAGTAGTTGGGGGGAATTTTTAACTCCCTCCCAACTTTATCCCCAATCCAAACACCCCCTAAGAGTGTGGTGGGAGTGAGTTTAATGTGCTTAATGGTTCGGAATAGCACGATCTGAGTTTACTAAAAATTGAGCATCGGTTTCAAGATTTTATAATCACCAACAATGTGGACGTTCTAAAGTAGTGGTAATTATCAAAGGTCCAAAGGTGCTCATGGGAGAGATGGCAAGTTGCTAACAAACTAGTAAATGAAATTGGTGCAGTTCTGGGAATCATAAATAAGCAAGAGGCTTCTATGCACATTAAAGAGTATGTATAAGAGTTAAATGAGAAGGCATTAGGTCTAATGTCGTCATGTCAACAGCGTTCATCTACTTATTCACCATGTATGGGATCAGCGGGCCATGCCTATCTCAAGATTAGTCAAAATTGTGGCTTCTTTCGTACTGATTTTGAGGGTGAATATAGTCACCTATTTGACCAAGGCAGAAGTTTTTGGATTTTTTTTTTATGGAGAGACAACTGCCTAACTTTCATATTGAAAATCCCTGCTTGTGCAGGCTATCCATTTTATTGTCTCTCCCGGCATTTGTGTAAGAACTTTAGCAGAATATTCTCCTCCAAGAAGGGCAGATACATGACACGACACGACACACGTACATGACAACATGCCAATTTCTGAAAATGTAGTATACCGACACGTTGGAGACACGTTATTTTTTATTAGATAATATTAAAAGATCAAACCCAAAATACTTTAGTTTATTTTTACTACTATTAAAAATAATTAAAAAACAACATGACTGAAAATTTAGTTGGTTATTGAATTTAGTTTAAAATTTAAATGCACATAAAACTCAATAAGTCATATGAGCCAACTTAAACCCAATAAAGACAAAAGCCTAACATGCCACAAACTACCCATTAGAAGCCCACAAAATAAAATTTATAAAAAAATTCGTAATTAGAAAAAAAACCTAATTCTTTAAAACCTCCTTCCCTCCCCCGGTTCTGCTTTCCCTCCATCTCTCCTCACTGTTGTTCGATCTCCCTTCCTCTACCTCCAATGGACTTCGTTGCCGACCACCTCTGCCAACACCATCATTCTGCTGCCGACCGCTTCAAAGGTTTGAGTTTTTGAATGGCACGTCCTTGACGTGTCCTGTTTGAAATTAAACAAAAAATAAAAAAAAAAAGGTCGAACATGTGTCAGTGTTCGACACGTGTTTGACATGGACACTTTGTAGTTGCACTTCCTAGATTCTCATTGTATCACCTTTGGGTCAGTGGGGCGTGCTTTCTAAAAAAGCTCACCTTTGGGTCAGCAATTTCTTAATCTGTTCCTTCAAAGACAATGAACTGCTACCCAAAGGTCAGTTGCATTGTGATTCTACAGGAAAGGAGTTCAAAATCGCCAGGTTATATAATACTCAAATTTCAAGATCCCCTATTGAACCAATGAACTGAGAAGTTTGTGTCAATCACACTGTTGTTTGATCACATTTAGCATATGGGTGGTAATTCATTGCATCTCCAGTCACAAGTTTTAAAAATGTAGAAGAACGATGTTTGGCACAAAGATAGCCAAGACTATTTATTTGTATTTGCAACTTTACATTTTTCCTTGCAATACTCTGTTTCTTAATTTATTTTCGTAAGCTAACTAGCAGAATCGTTGTATCACATTGGTTCACATCTGGGATTACATATTTTCTTCTGGTTTTCTTGAACTTCTGTACCGTTTTATTGGAACAGAAGAAGCAAACGGTACCTTCGACGGAACTTAAAACTAAAGATGAAGAGGTAACATCATTGCCCTTACATATTGAACTGATATCTAACAGACACCATATGTTAAGTTAATAATTTTTATTGTTTCATTTCAAATCTAATATACAACTTCTTTTTTTTGCCAACGGCTCTTTCTTAGAAGTACTCAATTACTAGTGAGTTAAAGATAGTTTTTGTGAAAAGAATTTTTAAGCGAGAGTATTTCTTCTCTTGCACTTTTGGAAGAATCGTTAATTACGTGTTACTTCTAAAAGCACTTTGAGGGGTCGTTTGGTTTAAGGTTTTATTGGATGCCCATGGGTAAAAGATGCCAGAGAATAAGATGTATGAGAATAATAAATGCCTGGGAATAAGATGACTCCGTTTGGTTCTACATGGGAATGTTATCAGATTTTTATGTAAACAAATGGTATTTATATTTGTTTAATAAAATTAATATATAAATCTTATGTAATATATAATTACGATCTATAAATAACGTGCAAATTTATTTTATGAGATTGATCTTATAAATTTTATGTAATTATTATCTATTATTAATAAAATGATAAAAATGAATTTTAAAAAAGTAATTAATTAATATTTTTTAATGAGAAAAATTAATTGTTAATTGATCCAAATAACTCATGAATAATTAATTATAATGATATCCTTACCATAAATTAATAATATTTATAATTAATTGATTAAATATAATATTAATTAGTGATTTAATATTTTCATAATGAATTTTATAATGAATGTTTAGGCTTGTTTTATGAAATTAATCCTAAAAACATTATTTTGTTAACTAATCAAAATTAATGTTAACTAATAAAAATAAATTAATTAATTATAAAACAAATCAGCTACAACTAAATGAAACCAAAAGCCAAGTTTTCAAGCGTATTTTTAATTAAATAATTAATTATGATTATTGAAAATATGTATATATATACTTAAATATTAATAAAGAAGAGAGAGAGGAAGAGAGAGAAAGAGAGAGATGGAGAGTATAAAGAAAACCCATCATTCTTGAAGGGTATAGAAACCCCATCCATCATGGGAAAAAGTGATGCCCATGCCCATGGTTACAAACATTGTTCCAAACAAGGAGATTTAAAACTTTTACCCATACCCATCCTCAAAACCTTACACCAAATGGCCCCTGAGTGCTTTATAAGAAAGGTTGTTAGGATTTTCAGAATTGTTTTTTTTACTATGCAACCTCTCACCATGAAAATTTTGAAATGTGTTTTTAATTAACAAAAAGTCAAAAACCATTTTCACCTTCTCAAAAGCCATCTCAAGCTTAGAAAAAAGGTGCCTTACTATTGAATCTATCATTTTACGTCTTCTAATGTTGTTTGGTCTCTTTCTCAAGTGCTGGATTCCACTTAAGTACTATGGCCTAGAGAGTGATCTATCGACCAGATATCAGCGAAGCATGGTGGCACAAAAAATTTCTCCTATCCAATTTTCAATGAGCCCGTATGTGTTTTTTGCTAATTGATGCATATAATCTTTAATGACAGTAAATTTCATCTATTTGATAATAATATTTAGTTCTACTTATTAAGGCATGACTATATGGACTCCTTGTGTCCTGGTGCGAGCACAAGCAGCAATAAGCCCAGAGGTCCATCTAAAAGGTATATGCATTTACATATTCAGCTATTTAATTTATGTTACTGAACATCTAAGTAGTCAGGCAACCCTGAAGTAAACAGGGAGAATCCAAATATTTACTAATGTTTTTAATCCTACTTGTGGATATTTTAGGCATTTGCTTTCGTTGTCTTTGGAGGAACGGATTAAGAAATTGCTGAGCGAGGTTTGTGTGTAAGATGATTACTTGTGAAAATTTATTCCTGATTGCATGAGAAGATATCGATGCCCGTGCACGTCTACTCTAGCTCCTAACCTTTACGCATTATTAGTTGGCTGCGTATTCTTTGTCCTTTTATGCATTCATCAAACTTTTTTCGATTGTCATGAAATCTTATTTTCAAATTTTACTCTCTCAACTTAATCAAAGGATTTTTTTTCGATAGTGTACTACTTTAGCCTTTATTAGATAACGATTTTTGTCAGATATGATTGGAGTTGGGATATTGAGACGTAGTCATTAAACACTTATTGGAGAATTTTTTGTGATGTTATTGGGGGTGGGATATGCAAATTTATATTCAGAAAGGATTTTGATTATGTGTGATGGAGATTAGCTCTGAAACTATTTGTAACTTTCACTATATCAATGATAAGTTGTTCTATTTCCAAAAAAGAAAAACAAGCAATGATCGGCGGGATGTCTTCGAAATTGAGTGGGTTTTTGGATTTCGTTGTTTTAGATCACTTTGGAATTTTGAAATTCCAGTTTTTTCCTTGGAATTTATTTCTTCTCAATTTTTTACTTAAACTCTTGTTTCCTTTAAAAGAAAAAAAGTTGTGGAATTGTCATTGGACATTCATCTCTAACTATATCAACAAGGTGGAGGGCTTTGATGTTCGTACCAGTGTTTGTAGTATCCCTAACAGTGTTTTTTAGGAACGCAATGATGATGACTTTGTAAAGAAAGTGTATTTACTGCTTGCTTCTGACTTATCGGACTTCAGAATGATTGATATTAAAGGACCCGTAATTAAACAAAAATGTTTGAGCTTAAAGACAGGATTTTGCAAATAAAATATAATTACGGCCTATCTGCTATAGAAGCAATGGTGTCATATTTCAATGTTGGTTGGTCTTTTTGTTTCATATGAAGTTAAGAAGCATTCATATGACAAATCCTTTCCAAATTTGCAATTGGCAGATATTTATCTCCTTCCCCTGTTGATCAAAATATATTAAATGCTGATGGCTTCTTAAGGAAGTGCATTATCTTTTTATCATATATATATCTTGCCTATTCATTGCTAATGACCTATTCTGTGTTTGTTTTGTGAATAATTTTTTTCCTCCTTAATAGGGACCTCCGGCTCAAAGATTTAGTGCTCTTAAGCATTATGCCCCTGATTATGAAGCAGACGAATTTATCGAAGCTCTTCAGCAGTATGCTCAGTCAGTGCAGGGTCTCTGGGTTCCAAAAAGTTCATTTCTACTTCCTCAAGATGGTAGTGGACGTTGTGCTAGGGATTTTGTTCTTTCTTTGTTTAGCAAGAATCCAGTGGTCAGCTCTTCGCAGATAAATGTTCCAAAGTCACTCCGGGACAAAGCGAAACATTTTTTGAATTTGTTTGGTGTTGAAAGACCTGCCTTTAAGGACTGGAAATTTAAGGAGAAAACAGATCGTTCATTTTTAAATAACTACCTGGATGTTGTTCAGAAGCAAGAGAAGGTCTGGAGGTCTGTGGAAGAAGGGATAACTAACTCTTTCCGGGGATCTGTGAAAAGTGTGCCCCAAGCAAATGCTGCTACAGGAAAGCCTGACATGGTTCCTAAACCTGAAAAACAAGTCAGTCATGACAAAGTTGCAACCAAAAGCAGTAATGCAGCTCTTAATCGGAAAAGTACCATGTCAGATGAAACCCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTCTTTCAAAATCACAAGGTTTGCAGGTCGGGCTGATTTTCTTTCTTCTTGCCTGCGCTTATAATTGTGAGATTTTGTCTTGGTTGGAAATGATGCTTCCGTGTACGATAGTATAGTAAGGACTGAGGAGCTTTGATGAGATTTAGGATATCATTGCCTTTTAACCTCGTGCTCTTTCTATAATTAGTTATCCTAAAGAAATGATAGATTTCTTCTAGAAGGAAAAATAATTATTCCTCTGTTCGCACTTGTTTATAAGCACTCATATTATTCATTTGAGCTGCTTGTTGAGAAAATCTTTTTTTTTTTGGAAATCCTCACATTTTGTAATAGTCTTAAGAGTTACCAATCATGGTGCATCGTAATGAACTGTTCTTCCCGTGGTATCTTGGGAAAGATGAATCTTTTTGTTGTAAAGCTGATGACATTTGCCTTATTATTGCAGCTTTCAGTTGATATGTCAAGGTTTGCGTGATTTGGCCGTGTCCCAATCTACTCTTCCGAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGATGAATTAAAAAAAATCATAAGCCAGGTTGCAACTGAGATTCATGGTCTTTATGTCTTGACGTCATCTCCAGAGCATCCAGAATATGATCCATTAAGGTGGCTAGTGAATTTTATTCATAAAGTGTCTTATGTGATAATTTTTGTTTATGTTATTTTTCCATGCTTGGTGCTCTAAGCAATGGTGTCGAAAAATTATCGAAAGTTTACTAGTTATTAGCACATGGCAGAACACTAAAAATTGGCGTCTTGGTTCTTTATCTTTTCTCAAGTGGTATGCTGCACTATGCAGGAAAGTTGTCATTCAACTTTTACGTGGGCGTGGACCTAAAGGAGTGCTTAAAAAAGCTGATGTTTTGGAAGCTTCCAAGCGTGAACTTGGAAGAGTTATCAATAGCAATGAATACAGCAAGGTTAGCCACCATATTATTTAACCTCATTCCTTTGACTTTCTTCCTGCATGATAAAGGAATAGTTGAATAGATTTTAATCCTCATGCTACTGTAATATTGTGGTTTGAGGATCTTTGTTGTTCAGTGATTATTATGCTATCCTATAACAAATGTTAGGACCCAGTCTCTAGCTCGCATGATATGTTGTAGGTTTAGATATGTTTTCTTCATTAGAACTAAATTCTACTAATGATGTGCCATCCTCAAATAATAACATTAACGACACAAACATCACGTTTGCTAGACAAACTAGCAGAAGAAGATATTAAATCTACTGATTTATCAGTTTTGCTATACAAGTTTCTTGACGTCATGATTCGATTTTTTTTATAAGATTTCCTTTGATAATATGATTTGCTTTTTTCTCAAATAAATAAAAATCTGGAAAGTCATAATGTAGTTATGCCAAAATATTGAGTCAGCTTGTTTCGATTTCATTATGGGCCCCTTGATTTTCACTTTGATTATTATTAATGTTTTTATTCATAAGTGTTTGGGCAGCTTGTGTGCACTTCGAATAATCTCACAAGACAACCCTTTGATCCTACTACATTTGGTTACCAAGGGAACACGTAGGATATTAAATCCTAGGTATGGGGCTACCATGAATTCATTCCTGTTAAGCCCTTTTATTATTTGCATAGCCCTTATCGACCACCAGGCCAATCCATGATAATTCACTCCGAATATCATTATTAAAACATGATTATTGAGAATCTTTCTTTTTGTCTCTCTGGCAAGGGTTTTGAATGACAAGCTTGCTTGACTGATTGAATAGCAGGCATTTTAAAGAGCTGGGAATTAAGGGTTAGCTCTGCCTATCTGGAAGGGGAAGAAAAGTTGGTTTGACAAGAGGGAAGGGAACTGTAGTAGACTTTGAGAGGTCTTACCAGCTTGAAGTCACTCCAATTTCTGCTTTTTGAACCTTTAATCCTTGATGCTTTAAACTCGATGAAGCCCTCTCATTTGGTCTCTGGAAGTTTTCCAGAGATCTAATCACAGCCCTTTTTTCCCACTTTAGTAGATTTTCCCAGCCTTCATGTGGTTTTTCAGTTGTGTTGCGCAGGATAGCCATGATAATTGGAACTCATGCCTACCATCTACCGAGATAACTTTTATCTTCACTGAAAGTACCGTCAATCAGTGTTCATTTTGTATACTTTCTAGTGACTATCTTCTACCATGGGATTGGCTTATACAATTGTTATGAATTTCCATAAATGTTTTCAGCCTCCTGGTGTTACGAAATCTGATTCTGGTCTTTAACCGTACCCTATTGTCTTTTGTGCAGGTTATGAATGAGATTTGCGTGTCCCACGGGTCTTCTTGGGCCTTGAAGAGTGGTGATGGAAATTCAAGATGACTAGGTTCTTCTTGGGGCATTCCCAGCACAATTAAAGAGGTTCAAAGCAAAGCAAGCAACCAGACCTCGCTCTTCCGTACAACTTTCTATACTCTTGCACTAGAAAAGATATCAAATCATGAAAGAAGAATCTCTTCATCTCAAAAAGGATTAAAAAAAGCTCTTTTTCTTTGCTTATTTTTTGGTTCTGATTGATAAAATATGCATTTTGCAGATAAATTGAATGCCATTATCCAGTGGCCTACATCATTTGATCCACATCCAAATTTTGAGTCCATGTATTTTCTCCAACATTCCTCAAAATATTGCATAAGTAGAAGGGAGAGGAATAGGTGGGTGGGTGTAATTTGTTGAGGATTAAGCTATTGAAGAAATGAAATGTACCTTATCGAAAGTAATTTAGATCAGATAAATGAAGTATCAATTTTTCTATCTTTACCGTTATTTGCTTCTACTTAATTATCACCCAATTGATTGTAGTTGTAATGATGCAAAAGGCCATATTAGCTAATAAGATTTCAAATACAGTAACTTTTAGAGAACATTAGCCGTGATAAACTGTTGATTTCGCTGTTTGATGCCAAATTACTGTCCTTTTCATCAGGTACCATATTCCAGCGCAGCGAACCTAATGGAAAATGCTTTGGCAGAGTGTGAACGCTTTTTAAAATCGTTGTGCACCACAAAAATTTTGAACTGTACAGAAAAGGTAATATACTAGCCCTCTTATAGCAGGAAATCTGACCCTTGCTGTGTCAACAAGATTCAGCAAGTAACAGCCAGTAATGAACTAAAAGCTTTTTTTTTTTTTTGGATGTCTTTTATTAACAATATCTAGAAGATGCTTTTATTTTCTTTAGGTTAAGTAACAAATTTAGTCTTTGACCATTGCTTATTTAGTGTTGAAATGTTTAGAACGTTTCAACTATGTTCTTAAATTTTACCGTATTTTATTCATTAACACTAGTGTACCGTGTACGTACACTACTCTATTAGATACAATTTTGATGATTATGATGTGTGCTCTTTTTCTATTTTGTTACAAATACTTGGTATCCGACTGGGGCCAAACATGTTCTTGCTGAAGAACCAAGATGATATAGAGATTTGATAATTTTTTTTAGACCCAACCATGTCTATTTAGGAGTTGAGAATGGGAGAGGAACTTCTATTTACACTTTGAGGGATAGTGGGGAGAGATAAATTCTCCATCTCATTTATAATAAATTCGTTTCAAAAGCC

mRNA sequence

ATTTAGGGAAAATTATTTGGGCGGCCGAACAAGTTATTCATCTCCGCCGGAGCAGTTGCTGGCGAGTTAAGCTGCTTGATTACATATTAGAACAAAAAACTCACCTTCTTCATCGGCTCTTTCGAGTCCGAGAACTTCAAACAGTTGCAGAAGCTTTTCACTCTTCTCATTCACTAAGAGAGAGGAACGCGTTGAAACCTTCAGGATGGACCTGGACGACCTAGACGAACCGAGCCAGGTACCATCACGAACCTCCAGATTCGCCCCCAAGAACTCTAAATTCAAGCCCAAGCCGAAATCGGAAGCAGTTCCAAAACCGGAGGCCCAACAGCCGCCAGCGAAGCCAGAACCTCAGCCTCCCGTCTCGAAGTCGGAAGTTGACGAGCCGGATGCTCGAATTGGGGAGAAGAAGGAAGAAGGTGAAGAAGTTGAACTGAAACCTAAAGTTGAACCCTTGCTTCCTAATGGAGTTGCTAAAATGGACGTCGAAACTAAGTCCGAAGTTGAAGAGGAGACAATGGTGGATGATGATCCAATGGAAGAGGATGCTTCTGAAGATATGGTGGTTCGTGAAATCGACGTTCTGTTTACTCCTTCAGCTGACATCAATTCGAAATTATATGTATTACAATATCCCCTGAGACCACGCTGGAGGCCTTATGAATTTGAGGGGCGATGTGAAGAGGTGAGAGTTAAACCTAGCAGTGGAGAAGTGGAAGTCGATCTGAATGTTGATATTGAATCCAATAACTATGACAGTAAAGCTGAAGGTAGTTTGCAAATGAAGAAGCAGACTTTGGCATCTTCATGGCATCCACCTCTAGCAACTACGTATGCTGTTGGGCTTCTTACGGGTAATCAGCTACACCTGAATCCCATACATGCAGTCGTGCAACTTCGGCCATCATTTGAACACCTTAATTCTGGTGGCCCAAAGAGGAAAAACAATGTTAGAGCTGATCCAGATGTTAAGTCGGAAGAGCCTACAGATGTTAACTCTGCAGTTGCAGCAAGGAAGCAGAAGAAGCAAACGGTACCTTCGACGGAACTTAAAACTAAAGATGAAGAGTGCTGGATTCCACTTAAGTACTATGGCCTAGAGAGTGATCTATCGACCAGATATCAGCGAAGCATGGTGGCACAAAAAATTTCTCCTATCCAATTTTCAATGAGCCCGCATGACTATATGGACTCCTTGTGTCCTGGTGCGAGCACAAGCAGCAATAAGCCCAGAGGTCCATCTAAAAGGCATTTGCTTTCGTTGTCTTTGGAGGAACGGATTAAGAAATTGCTGAGCGAGGGACCTCCGGCTCAAAGATTTAGTGCTCTTAAGCATTATGCCCCTGATTATGAAGCAGACGAATTTATCGAAGCTCTTCAGCAGTATGCTCAGTCAGTGCAGGGTCTCTGGGTTCCAAAAAGTTCATTTCTACTTCCTCAAGATGGTAGTGGACGTTGTGCTAGGGATTTTGTTCTTTCTTTGTTTAGCAAGAATCCAGTGGTCAGCTCTTCGCAGATAAATGTTCCAAAGTCACTCCGGGACAAAGCGAAACATTTTTTGAATTTGTTTGGTGTTGAAAGACCTGCCTTTAAGGACTGGAAATTTAAGGAGAAAACAGATCGTTCATTTTTAAATAACTACCTGGATGTTGTTCAGAAGCAAGAGAAGGTCTGGAGGTCTGTGGAAGAAGGGATAACTAACTCTTTCCGGGGATCTGTGAAAAGTGTGCCCCAAGCAAATGCTGCTACAGGAAAGCCTGACATGGTTCCTAAACCTGAAAAACAAGTCAGTCATGACAAAGTTGCAACCAAAAGCAGTAATGCAGCTCTTAATCGGAAAAGTACCATGTCAGATGAAACCCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTCTTTCAAAATCACAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTGCGTGATTTGGCCGTGTCCCAATCTACTCTTCCGAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGATGAATTAAAAAAAATCATAAGCCAGGTTGCAACTGAGATTCATGGTCTTTATGTCTTGACGTCATCTCCAGAGCATCCAGAATATGATCCATTAAGGAAAGTTGTCATTCAACTTTTACGTGGGCGTGGACCTAAAGGAGTGCTTAAAAAAGCTGATGTTTTGGAAGCTTCCAAGCGTGAACTTGGAAGAGTTATCAATAGCAATGAATACAGCAAGGTTATGAATGAGATTTGCGTGTCCCACGGGTCTTCTTGGGCCTTGAAGAGTGGTGATGGAAATTCAAGATGACTAGGTTCTTCTTGGGGCATTCCCAGCACAATTAAAGAGGTTCAAAGCAAAGCAAGCAACCAGACCTCGCTCTTCCATAAATTGAATGCCATTATCCAGTGGCCTACATCATTTGATCCACATCCAAATTTTGAGTCCATGTACCATATTCCAGCGCAGCGAACCTAATGGAAAATGCTTTGGCAGAGTGTGAACGCTTTTTAAAATCGTTGTGCACCACAAAAATTTTGAACTGTACAGAAAAGGTAATATACTAGCCCTCTTATAGCAGGAAATCTGACCCTTGCTGTGTCAACAAGATTCAGCAAGTAACAGCCAGTAATGAACTAAAAGCTTTTTTTTTTTTTTGGATGTCTTTTATTAACAATATCTAGAAGATGCTTTTATTTTCTTTAGGTTAAGTAACAAATTTAGTCTTTGACCATTGCTTATTTAGTGTTGAAATGTTTAGAACGTTTCAACTATGTTCTTAAATTTTACCGTATTTTATTCATTAACACTAGTGTACCGTGTACGTACACTACTCTATTAGATACAATTTTGATGATTATGATGTGTGCTCTTTTTCTATTTTGTTACAAATACTTGGTATCCGACTGGGGCCAAACATGTTCTTGCTGAAGAACCAAGATGATATAGAGATTTGATAATTTTTTTTAGACCCAACCATGTCTATTTAGGAGTTGAGAATGGGAGAGGAACTTCTATTTACACTTTGAGGGATAGTGGGGAGAGATAAATTCTCCATCTCATTTATAATAAATTCGTTTCAAAAGCC

Coding sequence (CDS)

ATGGACCTGGACGACCTAGACGAACCGAGCCAGGTACCATCACGAACCTCCAGATTCGCCCCCAAGAACTCTAAATTCAAGCCCAAGCCGAAATCGGAAGCAGTTCCAAAACCGGAGGCCCAACAGCCGCCAGCGAAGCCAGAACCTCAGCCTCCCGTCTCGAAGTCGGAAGTTGACGAGCCGGATGCTCGAATTGGGGAGAAGAAGGAAGAAGGTGAAGAAGTTGAACTGAAACCTAAAGTTGAACCCTTGCTTCCTAATGGAGTTGCTAAAATGGACGTCGAAACTAAGTCCGAAGTTGAAGAGGAGACAATGGTGGATGATGATCCAATGGAAGAGGATGCTTCTGAAGATATGGTGGTTCGTGAAATCGACGTTCTGTTTACTCCTTCAGCTGACATCAATTCGAAATTATATGTATTACAATATCCCCTGAGACCACGCTGGAGGCCTTATGAATTTGAGGGGCGATGTGAAGAGGTGAGAGTTAAACCTAGCAGTGGAGAAGTGGAAGTCGATCTGAATGTTGATATTGAATCCAATAACTATGACAGTAAAGCTGAAGGTAGTTTGCAAATGAAGAAGCAGACTTTGGCATCTTCATGGCATCCACCTCTAGCAACTACGTATGCTGTTGGGCTTCTTACGGGTAATCAGCTACACCTGAATCCCATACATGCAGTCGTGCAACTTCGGCCATCATTTGAACACCTTAATTCTGGTGGCCCAAAGAGGAAAAACAATGTTAGAGCTGATCCAGATGTTAAGTCGGAAGAGCCTACAGATGTTAACTCTGCAGTTGCAGCAAGGAAGCAGAAGAAGCAAACGGTACCTTCGACGGAACTTAAAACTAAAGATGAAGAGTGCTGGATTCCACTTAAGTACTATGGCCTAGAGAGTGATCTATCGACCAGATATCAGCGAAGCATGGTGGCACAAAAAATTTCTCCTATCCAATTTTCAATGAGCCCGCATGACTATATGGACTCCTTGTGTCCTGGTGCGAGCACAAGCAGCAATAAGCCCAGAGGTCCATCTAAAAGGCATTTGCTTTCGTTGTCTTTGGAGGAACGGATTAAGAAATTGCTGAGCGAGGGACCTCCGGCTCAAAGATTTAGTGCTCTTAAGCATTATGCCCCTGATTATGAAGCAGACGAATTTATCGAAGCTCTTCAGCAGTATGCTCAGTCAGTGCAGGGTCTCTGGGTTCCAAAAAGTTCATTTCTACTTCCTCAAGATGGTAGTGGACGTTGTGCTAGGGATTTTGTTCTTTCTTTGTTTAGCAAGAATCCAGTGGTCAGCTCTTCGCAGATAAATGTTCCAAAGTCACTCCGGGACAAAGCGAAACATTTTTTGAATTTGTTTGGTGTTGAAAGACCTGCCTTTAAGGACTGGAAATTTAAGGAGAAAACAGATCGTTCATTTTTAAATAACTACCTGGATGTTGTTCAGAAGCAAGAGAAGGTCTGGAGGTCTGTGGAAGAAGGGATAACTAACTCTTTCCGGGGATCTGTGAAAAGTGTGCCCCAAGCAAATGCTGCTACAGGAAAGCCTGACATGGTTCCTAAACCTGAAAAACAAGTCAGTCATGACAAAGTTGCAACCAAAAGCAGTAATGCAGCTCTTAATCGGAAAAGTACCATGTCAGATGAAACCCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTCTTTCAAAATCACAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTGCGTGATTTGGCCGTGTCCCAATCTACTCTTCCGAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGATGAATTAAAAAAAATCATAAGCCAGGTTGCAACTGAGATTCATGGTCTTTATGTCTTGACGTCATCTCCAGAGCATCCAGAATATGATCCATTAAGGAAAGTTGTCATTCAACTTTTACGTGGGCGTGGACCTAAAGGAGTGCTTAAAAAAGCTGATGTTTTGGAAGCTTCCAAGCGTGAACTTGGAAGAGTTATCAATAGCAATGAATACAGCAAGGTTATGAATGAGATTTGCGTGTCCCACGGGTCTTCTTGGGCCTTGAAGAGTGGTGATGGAAATTCAAGATGA

Protein sequence

MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDEPDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMVDDDPMEEDASEDMVVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIESNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHLNSGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGLESDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEERIKKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLKKADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR

Homology

[Close]

BLAST of Tan0015443 vs. ExPASy Swiss-Prot
Match: Q9NVU0 (DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens OX=9606 GN=POLR3E PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 9.0e-32
Identity = 128/477 (26.83%), Postives = 208/477 (43.61%), Query Frame = 0


Query: 117 EDMVVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNV 176
           +D VV+EIDV    S  +  KLY+ QYP+RP    Y+        ++KP   +VE+++ +
Sbjct: 6   DDPVVQEIDVYLAKS--LAEKLYLFQYPVRPASMTYDDIPHL-SAKIKPKQQKVELEMAI 65

Query: 177 DIESNNY------------------DSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGN 236
           D  + NY                  ++    S  M KQT  SS      + YA  L    
Sbjct: 66  DTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYRQG 125

Query: 237 QLHLNPIHAVVQLRPSFEHLNSGGPKRKNNVRADP--DVKSEEPTDVNSAVAAR------ 296
           +LHL P+H ++QLRPSF +L+    K +    A+   D   +E  D    +  R      
Sbjct: 126 ELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRPES 185

Query: 297 -KQKKQTVPSTEL--KTKDEECWIPLKYYGLESDLSTRYQRSMVAQKISPI---QFSMSP 356
            + +++ V S E   K   EE W+ L YYGL    S   ++ ++    S +   +   SP
Sbjct: 186 EQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVKSP 245

Query: 357 HDYMDSLC-PGASTSSNKPRGPSK----RHLLSLSLEERIKKLLSEGPPAQRFSALKHYA 416
            +Y+  L  P      +KP  PS       L +L L ++IK L+         + +    
Sbjct: 246 SEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSLLG 305

Query: 417 PDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSG---------RC-ARDFVLSLFSK 476
           P  ++   +  +Q+ A  VQG WV KS  L P+D S           C  RDFV+  F++
Sbjct: 306 PSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKFTQ 365

Query: 477 NP-VVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDVVQKQEK 536
           +  VV      V K   +  K FL    V R   K W+F    D  F+  + DVVQ+Q  
Sbjct: 366 SRWVVRKEVATVTKLCAEDVKDFLEHMAVVR-INKGWEFILPYDGEFIKKHPDVVQRQHM 425

Query: 537 VWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSNAALNRK 546
           +W  ++  +   +    +++P+   A   P  +   ++++   K   + ++A L R+
Sbjct: 426 LWTGIQAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERE 478

[Close]

BLAST of Tan0015443 vs. ExPASy Swiss-Prot
Match: Q9CZT4 (DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus OX=10090 GN=Polr3e PE=1 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 9.0e-32
Identity = 130/487 (26.69%), Postives = 209/487 (42.92%), Query Frame = 0


Query: 117 EDMVVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNV 176
           +D V++EIDV    S  +  KLY+ QYP+RP    Y+        ++KP   +VE+++ +
Sbjct: 6   DDPVIQEIDVYLAKS--LAEKLYLFQYPVRPASMTYDDIPHL-SAKIKPKQQKVELEMAI 65

Query: 177 DIESNNY------------------DSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGN 236
           D  + NY                  ++    S  M KQT  SS        YA  L    
Sbjct: 66  DTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTARYAAALYRQG 125

Query: 237 QLHLNPIHAVVQLRPSFEHLNSGGPKRKNNVRAD---PDVKSEEPTDVN------SAVAA 296
           +LHL P+H ++QLRPSF +L+    K +    A+      + E   DV       S   +
Sbjct: 126 ELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEEDVKQITVRFSRPES 185

Query: 297 RKQKKQTVPSTEL--KTKDEECWIPLKYYGLESDLSTRYQRSMVAQKISPI---QFSMSP 356
            + +++ V S E   K   EE W+ L YYG+    S   ++ ++ Q  S +   +   SP
Sbjct: 186 EQARQRRVQSYEFLQKKHAEEPWVHLHYYGMRDSRSEHERQYLLCQGSSGVENTELVKSP 245

Query: 357 HDYMDSLC-PGASTSSNKPRGPSK----RHLLSLSLEERIKKLLSEGPPAQRFSALKHYA 416
            +Y+  L  P      +KP  PS       L +L L ++IK L+         + +    
Sbjct: 246 SEYLMMLMPPSPEEEKDKPVAPSNVLSMAQLRTLPLADQIKVLMKNVKVMPFANLMSLLG 305

Query: 417 PDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSG---------RC-ARDFVLSLFSK 476
           P  ++   +  +Q+ A  VQG WV KS  L P+D S           C  RDFV+  F++
Sbjct: 306 PSVDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGMPAEVLCRGRDFVMWKFTQ 365

Query: 477 NP-VVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDVVQKQEK 536
           +  VV      V K   +  K FL    V R   K W+F    D  F+  + DVVQ+Q  
Sbjct: 366 SRWVVRKEVAAVTKLCAEDVKDFLEHMAVVR-INKGWEFLLPYDLEFIKKHPDVVQRQHM 425

Query: 537 VWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSNAALNRKSTM 556
           +W  ++  +   +    +++P+       P  +   E++V   K   + ++A L R+   
Sbjct: 426 LWSGIQAKLEKVYNLVKETMPKKPDGQSAPVGLVSGEQRVQTAKTKAQQNHAFLERELQR 485

[Close]

BLAST of Tan0015443 vs. ExPASy Swiss-Prot
Match: O74883 (DNA-directed RNA polymerase III subunit rpc5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc37 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-10
Identity = 62/213 (29.11%), Postives = 101/213 (47.42%), Query Frame = 0


Query: 96  TKSEVEEETMVDDDPMEEDASEDMVVREIDVLFTPSADINSKLYVLQYPLRPRWRPY-EF 155
           ++ +  EE  + +D  EE   +D VVR   V F+P   + + L + Q+PLRP+ R Y + 
Sbjct: 4   SEDQAMEEAKLRNDETEE---QDPVVRTYPVFFSPG--LRNNLLLNQFPLRPKNRTYSDA 63

Query: 156 EGRCE-EVRVKPSSGEVEVDLNVDIESNNYDSKA----EGSLQMKKQTLASSWHPPLATT 215
            G    +VRVKP +G +EVD+ +       + KA     G   ++ QTL+     P  T 
Sbjct: 64  NGEAPIDVRVKPKTGWMEVDVPIPTTKYYNEDKAMKYGNGKKPIQTQTLSGRLQKP-RTN 123

Query: 216 YAVGLLTGNQLHLNPIHAVVQLRPSFEHLN--------SGGPKRKNNVRADPDVKSEEPT 275
             VGL+   Q H+ P+  + QLRPS +H+N        + GP   ++  + P      P 
Sbjct: 124 LMVGLIRDGQFHIVPLRGLTQLRPSMKHVNEYTQKLKAAAGPSNSSSGTSTP----RGPI 183

Query: 276 DVNSAVAARKQKKQTVPSTEL-KTKDEECWIPL 294
                 A +  +   V +T + +  +EE W+ L
Sbjct: 184 RAVQVTAKQNTEAPKVSTTHIVRATEEEEWVEL 206

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BLAST of Tan0015443 vs. NCBI nr
Match: XP_038876785.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Benincasa hispida])

HSP 1 Score: 1231.5 bits (3185), Expect = 0.0e+00
Identity = 635/704 (90.20%), Postives = 659/704 (93.61%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDE 60
           MDLDDLDE SQV SRTSRFAPK SKFKPKPKSE VPKPE QQPP K EPQPPVSK EV E
Sbjct: 1   MDLDDLDEQSQVRSRTSRFAPKASKFKPKPKSEVVPKPEPQQPPTKSEPQPPVSKPEVTE 60

Query: 61  PDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMVDDDPMEEDASEDMV 120
           PDARIGEKKEEGEEVE+KPKVEP LPNGVAKMDVETKSEVEEETMVDDDPMEEDASEDMV
Sbjct: 61  PDARIGEKKEEGEEVEIKPKVEPSLPNGVAKMDVETKSEVEEETMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIES 180
           VREIDVLFTPS DIN+KLYVLQYPLRPRWRPYEFEGRC+EVRVKPSSGEVEVDLNVDIES
Sbjct: 121 VREIDVLFTPSPDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSSGEVEVDLNVDIES 180

Query: 181 NNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHLNS 240
           NNYDSKA+GSLQMKKQTL SSW PPLAT+YAVGLL GN+LHLNP+HAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADGSLQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGLES 300
           GGPKRKN+VRADPDVKSEE  DVNSA A+RKQKKQT PSTELKT DEECWIPLKYYG ES
Sbjct: 241 GGPKRKNSVRADPDVKSEEHVDVNSAGASRKQKKQTGPSTELKTGDEECWIPLKYYGQES 300

Query: 301 DLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEERIK 360
           DLSTR+ RSMVAQ  +P+QFSMSP DYMDSLCPG STSSNKP+GPSKR+LLSLSLEERIK
Sbjct: 301 DLSTRHLRSMVAQTAAPMQFSMSPLDYMDSLCPGTSTSSNKPKGPSKRYLLSLSLEERIK 360

Query: 361 KLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRCAR 420
           KLL+EGPP QRFSALKHYAPDYEA+EFIEALQQYAQSVQGLWVPKSS LLPQD SGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQSVQGLWVPKSSVLLPQDASGRCAR 420

Query: 421 DFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYL 480
           DFVL+LFSKNPVVSSSQINVPKSLR+K KHFLNLFGVERPAFKDWKFKEKTD  FL+NY+
Sbjct: 421 DFVLNLFSKNPVVSSSQINVPKSLREKVKHFLNLFGVERPAFKDWKFKEKTDHLFLSNYV 480

Query: 481 DVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSNA 540
           D+VQKQEK+WRSVEEGI+  F GS KSV  ANAATGKPDMV KPEKQVS+DK   KSSNA
Sbjct: 481 DLVQKQEKIWRSVEEGISKIFHGSGKSVSHANAATGKPDMVSKPEKQVSNDKATIKSSNA 540

Query: 541 ALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA 600
           ALNRKSTMSDETREALPKALQKLF NHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA
Sbjct: 541 ALNRKSTMSDETREALPKALQKLFHNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA 600

Query: 601 AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLKKA 660
           AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPK VLKKA
Sbjct: 601 AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKA 660

Query: 661 DVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           DVLEASKRELGR I SNEYSKVMNEICVSHGSSWALKSGDGNSR
Sbjct: 661 DVLEASKRELGRGITSNEYSKVMNEICVSHGSSWALKSGDGNSR 704

[Close]

BLAST of Tan0015443 vs. NCBI nr
Match: XP_022136590.1 (DNA-directed RNA polymerase III subunit RPC5 [Momordica charantia])

HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 634/706 (89.80%), Postives = 654/706 (92.63%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVD- 60
           MDLDDLDEPSQVPSRTSRFAPK SKFKPKPKSE VPKPE QQPP KPEP+PP SK E + 
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60

Query: 61  -EPDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMVDDDPMEEDASED 120
            EPDA  GEKKEEGEEVE+KPKVE  LPNGV KMDVETKSE EEETMV DDPMEED SED
Sbjct: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV-DDPMEEDVSED 120

Query: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180
           MVVREIDVLFTPSADINSKLYVLQYPLRP WRPYEFEGRCEEVRVKPSSGEVEVDLNVDI
Sbjct: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180

Query: 181 ESNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHL 240
           ESNNYDSKAEGSLQMKKQTL SSW PPLATTYAVGLL GN+LHLNPIHAVVQLRPS EHL
Sbjct: 181 ESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHL 240

Query: 241 NSGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGL 300
           NSGGPKRKN VR DPDVK EE  DVNSAVA+RKQKKQT  STELKT D+ECWIPLKYYGL
Sbjct: 241 NSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGL 300

Query: 301 ESDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEER 360
           ESDLSTRYQRSMVAQK SPIQFSMSP DYM+SLCPGA TSS KPRGPSKR+LLSLSL+ER
Sbjct: 301 ESDLSTRYQRSMVAQKSSPIQFSMSPDDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDER 360

Query: 361 IKKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRC 420
           IKKLLSEGPP QRFSALKHYAPDYEA+EFIEALQQYAQ VQGLWV KSSFLLPQDG GRC
Sbjct: 361 IKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRC 420

Query: 421 ARDFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNN 480
           ARDFVL LFSKNP++SSSQINVPKSLRDKAKHFLNLF VERPAFKDWKF+EKTDRSFLNN
Sbjct: 421 ARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNN 480

Query: 481 YLDVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSS 540
           YLD+VQKQEK+WRSVEEGITNSFRGSVKS   ANAATGKPD+VPK EKQVS DK  TKSS
Sbjct: 481 YLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSS 540

Query: 541 NAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600
           +A LNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV
Sbjct: 541 SAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600

Query: 601 AAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLK 660
           AAAYGVDAPPDELKKII QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPK VLK
Sbjct: 601 AAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLK 660

Query: 661 KADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           KADVLEASKRELGR INSNEY+KVMNEICVSHGSSW LKSGDGNSR
Sbjct: 661 KADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 705

[Close]

BLAST of Tan0015443 vs. NCBI nr
Match: XP_022985072.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima] >XP_022985073.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima] >XP_022985074.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 626/706 (88.67%), Postives = 657/706 (93.06%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDE 60
           MDLDDLDEPSQVPSRTSRFAPK SKFKPKPK+E VPKPE QQPP K EP+ PV + EV E
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKTEVVPKPEPQQPPTKLEPETPVPEPEVAE 60

Query: 61  PDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMV--DDDPMEEDASED 120
           PDA IGEKKEEGEEVE+KPKVE  LPNGV KMDVETK EVEEETMV  DDDPMEEDASED
Sbjct: 61  PDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVDDDDDPMEEDASED 120

Query: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180
           MVVREIDVLFTPS DIN+KLYVLQYPLRPRWRPYEFEGRC+EVRVKP++GEVEVDLNVDI
Sbjct: 121 MVVREIDVLFTPSLDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVDI 180

Query: 181 ESNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHL 240
           ESNNYDSKA+ +LQMKKQTL SSW PP+AT+YAVGLL G++LHLNP+H VVQLRPSFEHL
Sbjct: 181 ESNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEHL 240

Query: 241 NSGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGL 300
           NSGGPKRK NVRADP+VKSEE TDVNSA  +RKQKKQT PSTE KT DEECWIPLKYYGL
Sbjct: 241 NSGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEECWIPLKYYGL 300

Query: 301 ESDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEER 360
           ESDLSTR+ RSMVAQK SP+QFSMSPHDY+DSLCPGAS+S NKP+GPSKR LLSLSLEER
Sbjct: 301 ESDLSTRHLRSMVAQKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEER 360

Query: 361 IKKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRC 420
           IKKLL+EGPP QRFSALKHYAPDYE DEFIEALQQYAQSVQGLWV KSSFLLPQDGSGRC
Sbjct: 361 IKKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGRC 420

Query: 421 ARDFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNN 480
           ARDFVLSLFSKNPVVSSSQINVPKSLRDK KHFLN FGVERPAFKDW+FKEKTDR FLNN
Sbjct: 421 ARDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLNN 480

Query: 481 YLDVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSS 540
           Y+D+VQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KP+MVPKPEKQV HDK +TKSS
Sbjct: 481 YVDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKSS 540

Query: 541 NAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600
           NAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMAV
Sbjct: 541 NAALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600

Query: 601 AAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLK 660
           AAAYGVDAPPDELK+II QVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPK VLK
Sbjct: 601 AAAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLK 660

Query: 661 KADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           KADVLEASKRELGR INSNEYSKVMNEICVSHGSSWALKSGDGNSR
Sbjct: 661 KADVLEASKRELGRAINSNEYSKVMNEICVSHGSSWALKSGDGNSR 706

[Close]

BLAST of Tan0015443 vs. NCBI nr
Match: XP_023552355.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552356.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552357.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552358.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1213.7 bits (3139), Expect = 0.0e+00
Identity = 626/705 (88.79%), Postives = 657/705 (93.19%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDE 60
           MDLDDLDEPSQVPSRTSRFAPK SKFKPKPKSE VPKPE QQP  K EP+PPVSK EV E
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPTTKLEPEPPVSKPEVAE 60

Query: 61  PDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMV-DDDPMEEDASEDM 120
           PDA IGEKKEEGEEVE+KPKVE  LPNGV KMDVETK EVEEETMV DDDPMEEDASEDM
Sbjct: 61  PDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVEDDDPMEEDASEDM 120

Query: 121 VVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE 180
           VVREIDVLFTPS DIN+KLYVLQYPLRPRWRPYEFEGRC+EVRVKP++GEVEVDLNVDIE
Sbjct: 121 VVREIDVLFTPSVDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVDIE 180

Query: 181 SNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHLN 240
           SNNYDSKA+ +LQMKKQTL SSW PP+AT+YAVGLL G++LHLNP+H VVQLRPSFEHLN
Sbjct: 181 SNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEHLN 240

Query: 241 SGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGLE 300
           SGGPKRK NVRADP+VKSEE TDVNSA  +RKQKKQT PSTE KT DEECWIPLKYYGLE
Sbjct: 241 SGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTVDEECWIPLKYYGLE 300

Query: 301 SDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEERI 360
           SDLSTR+ RSMVAQK SP+QFSMSPHDY+DSLCPGAS+S NKP+GPSKR LLSLSLEERI
Sbjct: 301 SDLSTRHLRSMVAQKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEERI 360

Query: 361 KKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRCA 420
           KKLL+EGPP +RFSALKHYAPDYE DEFIEALQQYAQSVQGLWV KSSFLLPQDGSGRCA
Sbjct: 361 KKLLTEGPPIRRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGRCA 420

Query: 421 RDFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNY 480
           RDFVLSLFSKNPVVSSSQINVPKSLRDK KHFLN FGVERPAFKDW+FKEKTDR FLNNY
Sbjct: 421 RDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLNNY 480

Query: 481 LDVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSN 540
           +D+VQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KP+MVPKPEKQV HDK +TKSSN
Sbjct: 481 VDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKSSN 540

Query: 541 AALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600
           AALNR+STMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMAVA
Sbjct: 541 AALNRRSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600

Query: 601 AAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLKK 660
           AAYGVDAPPDELK+II QVATEIHGLYVLTSS EHPEYDPLRKVVIQLLRGRGPK VLKK
Sbjct: 601 AAYGVDAPPDELKRIICQVATEIHGLYVLTSSSEHPEYDPLRKVVIQLLRGRGPKAVLKK 660

Query: 661 ADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           ADVLEASKRELGR INSNEYSKVMNEICVSHGSSWALKSGDGNSR
Sbjct: 661 ADVLEASKRELGRAINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705

[Close]

BLAST of Tan0015443 vs. NCBI nr
Match: XP_022929283.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929284.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929285.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929286.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929287.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929288.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 626/705 (88.79%), Postives = 657/705 (93.19%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDE 60
           MDLDDLDEPSQVPSRTSRFAPK SKFKPKPKSE VPKPE QQPP K EP+ PVSK EV E
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKLEPETPVSKPEVAE 60

Query: 61  PDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMV-DDDPMEEDASEDM 120
           PDA IGEKKEEGEEVE+KPKVE  LPNGV KMDVETK EVEEETMV DDDPMEEDASEDM
Sbjct: 61  PDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVEDDDPMEEDASEDM 120

Query: 121 VVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE 180
           VVREIDVLFTPS DIN+KLYVLQYPLRPRWRPYEFEGRC+EVRVKP++GEVEVDLNVDIE
Sbjct: 121 VVREIDVLFTPSVDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVDIE 180

Query: 181 SNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHLN 240
           SNNYDSKA+ +LQMKKQTL SSW PP+AT+YAVGLL G++LHLNP+H VVQLRPSFEHLN
Sbjct: 181 SNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEHLN 240

Query: 241 SGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGLE 300
           SGGPKRK NVRADP+VKSEE TDVNSA  +RKQKKQT PSTE KT DEE WIPLKYYGLE
Sbjct: 241 SGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEESWIPLKYYGLE 300

Query: 301 SDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEERI 360
           SDLSTR+ RSMVA+K SP+QFSMSPHDY+DSLCPGAS+S NKP+GPSKR LLSLSLEERI
Sbjct: 301 SDLSTRHLRSMVAEKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEERI 360

Query: 361 KKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRCA 420
           KKLL+EGPP QRFSALKHYAPDYE DEFIEALQQYAQSVQGLWV KSSFLLPQDGSGRCA
Sbjct: 361 KKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGRCA 420

Query: 421 RDFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNY 480
           RDFVLSLFSKNPVVSSSQINVPKSLRDK KHFLN FGVERPAFKDW+FKEKTDR FLNNY
Sbjct: 421 RDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLNNY 480

Query: 481 LDVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSN 540
           +D+VQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KP+MVPKPEKQV HDK +TKSSN
Sbjct: 481 VDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKSSN 540

Query: 541 AALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600
           AALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMAVA
Sbjct: 541 AALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600

Query: 601 AAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLKK 660
           AAYGVDAPPDELK+II QVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPK VLKK
Sbjct: 601 AAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKK 660

Query: 661 ADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           ADVLEASKRELGR INSNEYSKVMNEICVSHGS+WALKSGDGNSR
Sbjct: 661 ADVLEASKRELGRAINSNEYSKVMNEICVSHGSAWALKSGDGNSR 705

[Close]

BLAST of Tan0015443 vs. ExPASy TrEMBL
Match: A0A6J1C4C6 (DNA-directed RNA polymerase III subunit RPC5 OS=Momordica charantia OX=3673 GN=LOC111008259 PE=4 SV=1)

HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 634/706 (89.80%), Postives = 654/706 (92.63%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVD- 60
           MDLDDLDEPSQVPSRTSRFAPK SKFKPKPKSE VPKPE QQPP KPEP+PP SK E + 
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60

Query: 61  -EPDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMVDDDPMEEDASED 120
            EPDA  GEKKEEGEEVE+KPKVE  LPNGV KMDVETKSE EEETMV DDPMEED SED
Sbjct: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV-DDPMEEDVSED 120

Query: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180
           MVVREIDVLFTPSADINSKLYVLQYPLRP WRPYEFEGRCEEVRVKPSSGEVEVDLNVDI
Sbjct: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180

Query: 181 ESNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHL 240
           ESNNYDSKAEGSLQMKKQTL SSW PPLATTYAVGLL GN+LHLNPIHAVVQLRPS EHL
Sbjct: 181 ESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHL 240

Query: 241 NSGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGL 300
           NSGGPKRKN VR DPDVK EE  DVNSAVA+RKQKKQT  STELKT D+ECWIPLKYYGL
Sbjct: 241 NSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGL 300

Query: 301 ESDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEER 360
           ESDLSTRYQRSMVAQK SPIQFSMSP DYM+SLCPGA TSS KPRGPSKR+LLSLSL+ER
Sbjct: 301 ESDLSTRYQRSMVAQKSSPIQFSMSPDDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDER 360

Query: 361 IKKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRC 420
           IKKLLSEGPP QRFSALKHYAPDYEA+EFIEALQQYAQ VQGLWV KSSFLLPQDG GRC
Sbjct: 361 IKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRC 420

Query: 421 ARDFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNN 480
           ARDFVL LFSKNP++SSSQINVPKSLRDKAKHFLNLF VERPAFKDWKF+EKTDRSFLNN
Sbjct: 421 ARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNN 480

Query: 481 YLDVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSS 540
           YLD+VQKQEK+WRSVEEGITNSFRGSVKS   ANAATGKPD+VPK EKQVS DK  TKSS
Sbjct: 481 YLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSS 540

Query: 541 NAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600
           +A LNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV
Sbjct: 541 SAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600

Query: 601 AAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLK 660
           AAAYGVDAPPDELKKII QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPK VLK
Sbjct: 601 AAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLK 660

Query: 661 KADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           KADVLEASKRELGR INSNEY+KVMNEICVSHGSSW LKSGDGNSR
Sbjct: 661 KADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 705

[Close]

BLAST of Tan0015443 vs. ExPASy TrEMBL
Match: A0A6J1JCH8 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483153 PE=4 SV=1)

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 626/706 (88.67%), Postives = 657/706 (93.06%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDE 60
           MDLDDLDEPSQVPSRTSRFAPK SKFKPKPK+E VPKPE QQPP K EP+ PV + EV E
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKTEVVPKPEPQQPPTKLEPETPVPEPEVAE 60

Query: 61  PDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMV--DDDPMEEDASED 120
           PDA IGEKKEEGEEVE+KPKVE  LPNGV KMDVETK EVEEETMV  DDDPMEEDASED
Sbjct: 61  PDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVDDDDDPMEEDASED 120

Query: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180
           MVVREIDVLFTPS DIN+KLYVLQYPLRPRWRPYEFEGRC+EVRVKP++GEVEVDLNVDI
Sbjct: 121 MVVREIDVLFTPSLDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVDI 180

Query: 181 ESNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHL 240
           ESNNYDSKA+ +LQMKKQTL SSW PP+AT+YAVGLL G++LHLNP+H VVQLRPSFEHL
Sbjct: 181 ESNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEHL 240

Query: 241 NSGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGL 300
           NSGGPKRK NVRADP+VKSEE TDVNSA  +RKQKKQT PSTE KT DEECWIPLKYYGL
Sbjct: 241 NSGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEECWIPLKYYGL 300

Query: 301 ESDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEER 360
           ESDLSTR+ RSMVAQK SP+QFSMSPHDY+DSLCPGAS+S NKP+GPSKR LLSLSLEER
Sbjct: 301 ESDLSTRHLRSMVAQKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEER 360

Query: 361 IKKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRC 420
           IKKLL+EGPP QRFSALKHYAPDYE DEFIEALQQYAQSVQGLWV KSSFLLPQDGSGRC
Sbjct: 361 IKKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGRC 420

Query: 421 ARDFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNN 480
           ARDFVLSLFSKNPVVSSSQINVPKSLRDK KHFLN FGVERPAFKDW+FKEKTDR FLNN
Sbjct: 421 ARDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLNN 480

Query: 481 YLDVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSS 540
           Y+D+VQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KP+MVPKPEKQV HDK +TKSS
Sbjct: 481 YVDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKSS 540

Query: 541 NAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600
           NAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMAV
Sbjct: 541 NAALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600

Query: 601 AAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLK 660
           AAAYGVDAPPDELK+II QVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPK VLK
Sbjct: 601 AAAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLK 660

Query: 661 KADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           KADVLEASKRELGR INSNEYSKVMNEICVSHGSSWALKSGDGNSR
Sbjct: 661 KADVLEASKRELGRAINSNEYSKVMNEICVSHGSSWALKSGDGNSR 706

[Close]

BLAST of Tan0015443 vs. ExPASy TrEMBL
Match: A0A6J1EMD6 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435914 PE=4 SV=1)

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 626/705 (88.79%), Postives = 657/705 (93.19%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDE 60
           MDLDDLDEPSQVPSRTSRFAPK SKFKPKPKSE VPKPE QQPP K EP+ PVSK EV E
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKLEPETPVSKPEVAE 60

Query: 61  PDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMV-DDDPMEEDASEDM 120
           PDA IGEKKEEGEEVE+KPKVE  LPNGV KMDVETK EVEEETMV DDDPMEEDASEDM
Sbjct: 61  PDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVEDDDPMEEDASEDM 120

Query: 121 VVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE 180
           VVREIDVLFTPS DIN+KLYVLQYPLRPRWRPYEFEGRC+EVRVKP++GEVEVDLNVDIE
Sbjct: 121 VVREIDVLFTPSVDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVDIE 180

Query: 181 SNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHLN 240
           SNNYDSKA+ +LQMKKQTL SSW PP+AT+YAVGLL G++LHLNP+H VVQLRPSFEHLN
Sbjct: 181 SNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEHLN 240

Query: 241 SGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGLE 300
           SGGPKRK NVRADP+VKSEE TDVNSA  +RKQKKQT PSTE KT DEE WIPLKYYGLE
Sbjct: 241 SGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEESWIPLKYYGLE 300

Query: 301 SDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEERI 360
           SDLSTR+ RSMVA+K SP+QFSMSPHDY+DSLCPGAS+S NKP+GPSKR LLSLSLEERI
Sbjct: 301 SDLSTRHLRSMVAEKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEERI 360

Query: 361 KKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRCA 420
           KKLL+EGPP QRFSALKHYAPDYE DEFIEALQQYAQSVQGLWV KSSFLLPQDGSGRCA
Sbjct: 361 KKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGRCA 420

Query: 421 RDFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNY 480
           RDFVLSLFSKNPVVSSSQINVPKSLRDK KHFLN FGVERPAFKDW+FKEKTDR FLNNY
Sbjct: 421 RDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLNNY 480

Query: 481 LDVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSN 540
           +D+VQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KP+MVPKPEKQV HDK +TKSSN
Sbjct: 481 VDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKSSN 540

Query: 541 AALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600
           AALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMAVA
Sbjct: 541 AALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600

Query: 601 AAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLKK 660
           AAYGVDAPPDELK+II QVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPK VLKK
Sbjct: 601 AAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKK 660

Query: 661 ADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           ADVLEASKRELGR INSNEYSKVMNEICVSHGS+WALKSGDGNSR
Sbjct: 661 ADVLEASKRELGRAINSNEYSKVMNEICVSHGSAWALKSGDGNSR 705

[Close]

BLAST of Tan0015443 vs. ExPASy TrEMBL
Match: A0A1S3BX09 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494365 PE=4 SV=1)

HSP 1 Score: 1192.6 bits (3084), Expect = 0.0e+00
Identity = 609/704 (86.51%), Postives = 650/704 (92.33%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDE 60
           MDLD LDE SQVPSRTSRFAPK+SKFKPKPKSE VPKPE QQPP K EPQPPVSK EV E
Sbjct: 1   MDLDGLDERSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPPTKLEPQPPVSKPEVVE 60

Query: 61  PDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMVDDDPMEEDASEDMV 120
           PDA+IGEKKE+GEEVE+KPKVE  LPNGVAKMDVETKSEVEE+TMVDDDPMEEDASEDMV
Sbjct: 61  PDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIES 180
           VREIDVLFTPS D NSKLYVLQYPLRPRWRPYEFEGRC+EVRVKPS+GEVE+DLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDIES 180

Query: 181 NNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHLNS 240
           NNYDSKA+ + QMKKQTL SSW PPLAT+YAVGLL GN+LHLNP+HAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADDTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGLES 300
           GGPKRKNN+RAD DVKSEE  DVNSA A+RKQKKQT PSTELKT+DEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEERIK 360
           DLSTR+ +SMV+Q +SP+QFSMSPHDYMDSLCPG STSSNKP+GPSK++LLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRCAR 420
           KLL+EGPP QRFSALKHYAPDYEA+EF+EALQQYAQ VQGLWVPKS FL+PQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYL 480
           DFVL LFSKNPVVSSSQINVPKSLRD+ KHFLNLFGVERPAFKDWKFKEKTD SFL+N++
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHV 480

Query: 481 DVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSNA 540
            +VQKQE+ W ++E+ +   F  S+KS P   A TGKPD+VPKPEKQVS DK  TKSSNA
Sbjct: 481 KIVQKQEEGWNAMEKAL--PFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNA 540

Query: 541 ALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA 600
            LNRK  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA
Sbjct: 541 PLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA 600

Query: 601 AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLKKA 660
           AYGVDAPP+ELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPK VLKKA
Sbjct: 601 AYGVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKA 660

Query: 661 DVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           DVLEASKRELGR INSNEYSKVMNEICVSHGSSW LKSGDGNSR
Sbjct: 661 DVLEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 702

[Close]

BLAST of Tan0015443 vs. ExPASy TrEMBL
Match: A0A0A0KUN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038800 PE=4 SV=1)

HSP 1 Score: 1181.0 bits (3054), Expect = 0.0e+00
Identity = 603/704 (85.65%), Postives = 646/704 (91.76%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKNSKFKPKPKSEAVPKPEAQQPPAKPEPQPPVSKSEVDE 60
           MDLD LDE SQVPSRTSRFAPK+SKFKPKPKSE VPKPE QQP  K EPQPP+SK EV E
Sbjct: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60

Query: 61  PDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETMVDDDPMEEDASEDMV 120
           PDAR+ EKKE+GEEVE+KPKVE  LPNGVAKMDVETKSEVEE+ MVDDDP+EEDASEDMV
Sbjct: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120

Query: 121 VREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIES 180
           VREIDVLFTPS D NSKLYVLQYPLRPRWRPYEFEGRC+EVRVKPS+GEVEVDLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180

Query: 181 NNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNPIHAVVQLRPSFEHLNS 240
           NNYD+KA+G+ QMKKQTL SSW PPLAT+YAVGLL GN+LHLNP+HAVVQLRPSFEHLNS
Sbjct: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKTKDEECWIPLKYYGLES 300
           GGPKRKNNVRAD DVKSEE  DVNSA A+RKQKKQT PSTE+KT+DEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRGPSKRHLLSLSLEERIK 360
           DLSTR+ +SMV+Q +SP+QFSMSPHDYMDSLCPG STS NKP+GPSK++LLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVPKSSFLLPQDGSGRCAR 420
           KLL+EGPP QRFSALKHYAPDYE +EFIE LQQYAQ VQGLWVPKS FL+PQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLSLFSKNPVVSSSQINVPKSLRDKAKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYL 480
           DFVL LFSKNPVVSSSQINVPKSLRD+ KHFLNLFGVERPAFKDWKFKEKTDR FL+N++
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480

Query: 481 DVVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPDMVPKPEKQVSHDKVATKSSNA 540
            + +KQE++W +VE+G T  F  S+KSV  ANAATGKP +VPK EKQVS D+  TKSSNA
Sbjct: 481 RIAEKQEELWNNVEKGFT--FLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNA 540

Query: 541 ALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA 600
            LNRK  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA
Sbjct: 541 PLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA 600

Query: 601 AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKGVLKKA 660
           AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPK VLKKA
Sbjct: 601 AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKA 660

Query: 661 DVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705
           DVLEASK ELGR INSNEYSKVMNEIC+SHGSSW LKSGDGNSR
Sbjct: 661 DVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702

[Close]

BLAST of Tan0015443 vs. TAIR 10
Match: AT5G49530.1 (SIN-like family protein )

HSP 1 Score: 522.3 bits (1344), Expect = 6.0e-148
Identity = 318/719 (44.23%), Postives = 436/719 (60.64%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAP-KNSKFKPKPKSEAVPKPEAQQPPAKPEPQ---PPVSKS 60
           MD DD D+P +V ++T RFAP +  K KPKPK    P+P A + P +P PQ     VSK+
Sbjct: 1   MDFDDDDKPKEV-TKTRRFAPGRAGKSKPKPK----PEPTADK-PVQPPPQSQTESVSKT 60

Query: 61  EVDEPDARIGEKKEEGEEVELKPKVEPLLPNGVAKMDVETKSEVEEETM----------- 120
           E D     +G             KVE  + NG  KM++++K + E E M           
Sbjct: 61  EHDVDAKFVG------------TKVETEVCNGSVKMEIDSKVDKEPEIMETELMEEDQQL 120

Query: 121 -VDDDPMEEDASEDMVVREIDVLFTPSADINSKLYVLQYPLRPRWRPYEFEGRCEEVRVK 180
            + ++  EE+  +D+VVREIDV F PS D N++LYVLQYPLRP WRPYE + RCEEVRV 
Sbjct: 121 PLQEEKEEEEEEDDVVVREIDVFFKPSIDANTQLYVLQYPLRPSWRPYEMDERCEEVRVN 180

Query: 181 PSSGEVEVDLNVDIESNNYDSKAEGSLQMKKQTLASSWHPPLATTYAVGLLTGNQLHLNP 240
           PS+ +VE+DL++D+ S NYDS     L M KQTL ++W  P    YAVG+L+G++LHLNP
Sbjct: 181 PSTSQVEIDLSMDVHSKNYDSNF--GLNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNP 240

Query: 241 IHAVVQLRPSFEHLNSGGPKRKNNVRADPDVKSEEPTDVNSAVAARKQKKQTVPSTELKT 300
           +HAV QLRPS + L+S           D   K EE T+ +   + ++ K     ST+ K 
Sbjct: 241 VHAVAQLRPSMQSLSS-----------DKKKKQEESTEESVGTSKKQNKGVQQASTDQKP 300

Query: 301 KDEECWIPLKYYGLESDLSTRYQRSMVAQKISPIQFSMSPHDYMDSLCPGASTSSNKPRG 360
            +EE W+ LKY+GL+S+  +RY   M+A   S I F+MSP  Y++ LC G S+ +++ + 
Sbjct: 301 INEETWVSLKYHGLQSEYCSRYLNGMMANGNSSIDFNMSPGTYINELCRGGSSRNSESKE 360

Query: 361 PSKRHLLSLSLEERIKKLLSEGPPAQRFSALKHYAPDYEADEFIEALQQYAQSVQGLWVP 420
             KR LLSL L+ER++KLL EG P  R+S LKHYAP++  ++F+ ALQ+Y + VQGLW P
Sbjct: 361 TLKRVLLSLPLKERVQKLLCEGSPLIRYSVLKHYAPEFSDEDFLGALQEYGRLVQGLWTP 420

Query: 421 KSSFLLPQDGSGRCARDFVLSLFSKNPVVSSSQINVP-KSLRDKAKHFLNLFGVERPAFK 480
           K+  LL  DG    ARD+VLSLFS+N  +  S++      ++   +  L  F  ER   K
Sbjct: 421 KTR-LLKLDGPVEAARDYVLSLFSQNTTIKYSEVEATGDKMKPLMERMLTEFAKERHVLK 480

Query: 481 DWKFKEKTDRSFLNNYLDVVQKQEKVWRSVEEGITNSFR---GSVKSVPQANAATGKPDM 540
           DWKFKE TD SF+ +Y ++V++Q+  W    E + +      G  ++  + N       +
Sbjct: 481 DWKFKEPTDVSFIKSYPEIVKEQDIFWTDKRENLKSRITAQGGKSRADKRRNVVGTSSSV 540

Query: 541 VPKPEKQVSHDKVATKSSNAALNRKST--MSDETREALPKALQKLFQNHKVCSFQLICQG 600
             KPE   +       S N  ++R  T  M +E ++ALPKAL+K+FQ HKVC ++ ICQG
Sbjct: 541 TVKPEVPTTLSDKGGSSKN-TIHRVVTQEMPEELKKALPKALKKVFQTHKVCRYETICQG 600

Query: 601 LRDLAVSQSTLPKADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYD 660
           LRDLAVS S  PKAD+ MAV  A  VDA   EL+ +I+ VAT IHG YV  SSP+HPEYD
Sbjct: 601 LRDLAVSTSNNPKADSGMAVNVALAVDAYQGELEDVINGVATNIHGSYVSISSPDHPEYD 660

Query: 661 PLRKVVIQLLRGRGPKGVLKKADVLEASKRELGRVINSNEYSKVMNEICVSHGSSWALK 698
            LR+VVI LL G  P   L KA+V  A + +L R I +NEY KVM+EIC ++ S W L+
Sbjct: 661 SLREVVISLLTGSPPGTKLMKAEVFAAGRTKLEREITNNEYIKVMHEICETNSSGWVLQ 686

The following BLAST results are available for this feature:

BLAST of Tan0015443 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NVU0	9.0e-32	26.83	DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens OX=9606 GN=POLR3E P...	[more]
Q9CZT4	9.0e-32	26.69	DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus OX=10090 GN=Polr3e ...	[more]
O74883	2.5e-10	29.11	DNA-directed RNA polymerase III subunit rpc5 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of Tan0015443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876785.1	0.0e+00	90.20	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Benincasa hispida]	[more]
XP_022136590.1	0.0e+00	89.80	DNA-directed RNA polymerase III subunit RPC5 [Momordica charantia]	[more]
XP_022985072.1	0.0e+00	88.67	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima] >XP_0...	[more]
XP_023552355.1	0.0e+00	88.79	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022929283.1	0.0e+00	88.79	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP...	[more]

BLAST of Tan0015443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4C6	0.0e+00	89.80	DNA-directed RNA polymerase III subunit RPC5 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1JCH8	0.0e+00	88.67	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1EMD6	0.0e+00	88.79	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita moschata OX...	[more]
A0A1S3BX09	0.0e+00	86.51	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KUN5	0.0e+00	85.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038800 PE=4 SV=1	[more]

BLAST of Tan0015443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49530.1	6.0e-148	44.23	SIN-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006886	DNA-directed RNA polymerase III subunit Rpc5	PFAM	PF04801	Sin_N	coord: 117..497 e-value: 4.5E-91 score: 306.2
IPR006886	DNA-directed RNA polymerase III subunit Rpc5	PANTHER	PTHR12069	DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5	coord: 111..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 509..550
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015443.1	Tan0015443.1	mRNA
Tan0015443.2	Tan0015443.2	mRNA
Tan0015443.3	Tan0015443.3	mRNA
Tan0015443.4	Tan0015443.4	mRNA
Tan0015443.5	Tan0015443.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005666	RNA polymerase III complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity