Tan0015277 (gene) Snake gourd v1

Overview
NameTan0015277
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING/U-box superfamily protein
LocationLG06: 27076162 .. 27076644 (-)
RNA-Seq ExpressionTan0015277
SyntenyTan0015277
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATAACGGCATTACGACCATACTTGGCATTTCAATTCCAAAGTTATAGAGACTACATTGACGCTAAGACTATAGCAAATGCGATAAAAGAGAAGTGGATTGAAATACGAAATAAGGGAAATCCGAATGCGTTTGGGAGAGTTTTTCCTCTTACAATTACCCTGAAATTATGGAGCGTTGTGATGTTGCACGAGGAACAACGACGACGGTTGTTGGATATAAGGAGTGAAGATGGAATGGTTCCGACTTGTGGTAATGCTATTCAGAAGATGCTAAAGAGAGTGGAATTTGAGGATATGGAAGGTGATGATCAAATTTGTGTAATTTGCTTTGAGGAGATAAAAAATATAGGGGCAGAGAAAAAGAATTCAATTGTGAAAATGCCTTGCTTGCATGTGTTTCATGAGCATTGCATTAAGGAGTGGTTGAACAATAGCCATTACTGTCCCATTTGCAGATTTCAAATGCCTACAGATTAA

mRNA sequence

ATGTCAATAACGGCATTACGACCATACTTGGCATTTCAATTCCAAAGTTATAGAGACTACATTGACGCTAAGACTATAGCAAATGCGATAAAAGAGAAGTGGATTGAAATACGAAATAAGGGAAATCCGAATGCGTTTGGGAGAGTTTTTCCTCTTACAATTACCCTGAAATTATGGAGCGTTGTGATGTTGCACGAGGAACAACGACGACGGTTGTTGGATATAAGGAGTGAAGATGGAATGGTTCCGACTTGTGGTAATGCTATTCAGAAGATGCTAAAGAGAGTGGAATTTGAGGATATGGAAGGTGATGATCAAATTTGTGTAATTTGCTTTGAGGAGATAAAAAATATAGGGGCAGAGAAAAAGAATTCAATTGTGAAAATGCCTTGCTTGCATGTGTTTCATGAGCATTGCATTAAGGAGTGGTTGAACAATAGCCATTACTGTCCCATTTGCAGATTTCAAATGCCTACAGATTAA

Coding sequence (CDS)

ATGTCAATAACGGCATTACGACCATACTTGGCATTTCAATTCCAAAGTTATAGAGACTACATTGACGCTAAGACTATAGCAAATGCGATAAAAGAGAAGTGGATTGAAATACGAAATAAGGGAAATCCGAATGCGTTTGGGAGAGTTTTTCCTCTTACAATTACCCTGAAATTATGGAGCGTTGTGATGTTGCACGAGGAACAACGACGACGGTTGTTGGATATAAGGAGTGAAGATGGAATGGTTCCGACTTGTGGTAATGCTATTCAGAAGATGCTAAAGAGAGTGGAATTTGAGGATATGGAAGGTGATGATCAAATTTGTGTAATTTGCTTTGAGGAGATAAAAAATATAGGGGCAGAGAAAAAGAATTCAATTGTGAAAATGCCTTGCTTGCATGTGTTTCATGAGCATTGCATTAAGGAGTGGTTGAACAATAGCCATTACTGTCCCATTTGCAGATTTCAAATGCCTACAGATTAA

Protein sequence

MSITALRPYLAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVMLHEEQRRRLLDIRSEDGMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHEHCIKEWLNNSHYCPICRFQMPTD
Homology
BLAST of Tan0015277 vs. ExPASy Swiss-Prot
Match: Q9CY62 (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 27/83 (32.53%), Postives = 46/83 (55.42%), Query Frame = 0

Query: 78  EDGMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHE 137
           E  + P    A+ + L R      + D + C +C  E      E + ++++MPC H+FH 
Sbjct: 59  EHHLPPPAAKAVVESLPRTVISSAKADLK-CPVCLLEF-----EAEETVIEMPCHHLFHS 118

Query: 138 HCIKEWLNNSHYCPICRFQMPTD 161
           +CI  WL+ ++ CP+CR ++PTD
Sbjct: 119 NCILPWLSKTNSCPLCRHELPTD 135

BLAST of Tan0015277 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-09
Identity = 26/83 (31.33%), Postives = 47/83 (56.63%), Query Frame = 0

Query: 78  EDGMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHE 137
           E  + P    A+ + L R      + + + C +C  E      E++ ++++MPC H+FH 
Sbjct: 59  EHHLPPPAAKAVVESLPRTVIRSSKAELK-CPVCLLEF-----EEEETVIEMPCHHLFHS 118

Query: 138 HCIKEWLNNSHYCPICRFQMPTD 161
           +CI  WL+ ++ CP+CR ++PTD
Sbjct: 119 NCILPWLSKTNSCPLCRHELPTD 135

BLAST of Tan0015277 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09
Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0

Query: 83  PTCGNAIQKMLKRVEFEDMEGDDQI-CVICFEEIKNIGAEKKNSIVKMPCLHVFHEHCIK 142
           P    A+ + L  V     + D  + C +C  E      E++ S+ +MPC H+FH  CI 
Sbjct: 53  PPAAKAVVQSLPVVIISPEQADKGVKCPVCLLEF-----EEQESVREMPCKHLFHTGCIL 112

Query: 143 EWLNNSHYCPICRFQMPTD 161
            WLN ++ CP+CR ++PTD
Sbjct: 113 PWLNKTNSCPLCRLELPTD 126

BLAST of Tan0015277 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-09
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 80  GMVPTCGNAIQKM-LKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHEH 139
           G  P   +AI  +   +V  + ++ +   C +C +E      E  + + +MPC HVFH+ 
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEF-----EDGSDVKQMPCKHVFHQD 246

Query: 140 CIKEWLNNSHYCPICRFQMPTD 161
           C+  WL   + CP+CRF++PTD
Sbjct: 247 CLLPWLELHNSCPVCRFELPTD 263

BLAST of Tan0015277 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.1e-09
Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 80  GMVPTCGNAIQKMLKRVEFEDME-GDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHEH 139
           G  P   +AI+  L RVE  D   G +  C +C E       E +    +MPC H+FH+ 
Sbjct: 171 GNPPASKSAIES-LPRVEISDCHIGSEANCAVCTEIF-----ETETEAREMPCKHLFHDD 230

Query: 140 CIKEWLNNSHYCPICRFQMPTD 161
           CI  WL+  + CP+CRF++P++
Sbjct: 231 CIVPWLSIRNSCPVCRFELPSE 246

BLAST of Tan0015277 vs. NCBI nr
Match: KAG6571896.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.1 bits (383), Expect = 4.0e-33
Identity = 71/152 (46.71%), Postives = 103/152 (67.76%), Query Frame = 0

Query: 10  LAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVMLHEEQR 69
           L+  FQ+++  IDA+ +A+A+ E+WIEIR++ N  +  RVFP+T+ L +W +V  +E   
Sbjct: 90  LSCSFQNFKPEIDAEPVADALIERWIEIRDEANSRSSDRVFPMTVNLTIWHIVARYE--- 149

Query: 70  RRLLDIRSED---GMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSI 129
              + + S     GMVP CG A+ KML+R+E ED    D ICVIC +E+KN   +     
Sbjct: 150 ---IGVGSGGDGCGMVPACGGAVGKMLRRLEREDEV--DGICVICLDELKNKKKKNGRFG 209

Query: 130 VKMPCLHVFHEHCIKEWLNNSHYCPICRFQMP 159
           ++MPCLHVFH +CI++WL NSHYCPICRF++P
Sbjct: 210 LQMPCLHVFHGNCIEDWLKNSHYCPICRFEVP 233

BLAST of Tan0015277 vs. NCBI nr
Match: XP_023511497.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.1 bits (383), Expect = 4.0e-33
Identity = 70/152 (46.05%), Postives = 103/152 (67.76%), Query Frame = 0

Query: 10  LAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVMLHEEQR 69
           L+  FQ+++  IDA+ +A+A+ E+WIEIR++ N  +  RVFP+T+ L +W +V  +E   
Sbjct: 90  LSCSFQNFKPEIDAEPVADALIERWIEIRDEANSRSSDRVFPMTVNLTIWHIVARYE--- 149

Query: 70  RRLLDIRSED---GMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSI 129
              + + S     GMVP CG A+ KML+R++ ED    D ICVIC +E+KN   +     
Sbjct: 150 ---IGVGSGGDGCGMVPACGGAVAKMLRRLKREDEV--DGICVICLDELKNKKKKNGRFT 209

Query: 130 VKMPCLHVFHEHCIKEWLNNSHYCPICRFQMP 159
           ++MPCLHVFH +CI++WL NSHYCPICRF++P
Sbjct: 210 LQMPCLHVFHGNCIEDWLKNSHYCPICRFEVP 233

BLAST of Tan0015277 vs. NCBI nr
Match: XP_022952293.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucurbita moschata] >KAG7011584.1 HRD1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 8.8e-33
Identity = 70/152 (46.05%), Postives = 103/152 (67.76%), Query Frame = 0

Query: 10  LAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVMLHEEQR 69
           L+  FQ+++  IDA+ +A+A+ E+WIEIR++ N  +  RVFP+T+ L +W +V  +E   
Sbjct: 90  LSCSFQNFKPEIDAEPVADALIERWIEIRDEANSRSSDRVFPMTVNLTMWHIVARYE--- 149

Query: 70  RRLLDIRSED---GMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSI 129
              + + S     GMVP CG A+ KML+R++ ED    D ICVIC +E+KN   +     
Sbjct: 150 ---IGVGSGGDGCGMVPACGGAVAKMLRRLKREDEV--DGICVICLDELKNKKKKNGRFG 209

Query: 130 VKMPCLHVFHEHCIKEWLNNSHYCPICRFQMP 159
           ++MPCLHVFH +CI++WL NSHYCPICRF++P
Sbjct: 210 LQMPCLHVFHGNCIEDWLKNSHYCPICRFEVP 233

BLAST of Tan0015277 vs. NCBI nr
Match: XP_022972455.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucurbita maxima])

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-32
Identity = 70/152 (46.05%), Postives = 102/152 (67.11%), Query Frame = 0

Query: 10  LAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVMLHEEQR 69
           L+  FQ+++  IDA+ +A+A+ E+WIEIR++ N  +  RVFP+T+ L +W +V  +E   
Sbjct: 90  LSSSFQNFKPEIDAEPVADALIERWIEIRDEANSRSSDRVFPMTVNLTMWHIVARYE--- 149

Query: 70  RRLLDIRSED---GMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSI 129
              + + S     GMVP CG A+ KML+R+E ED    D ICVIC +E+K    +     
Sbjct: 150 ---IGVGSGGDGCGMVPACGGAVGKMLRRLEREDEV--DGICVICLDELKKKKKKNGRFG 209

Query: 130 VKMPCLHVFHEHCIKEWLNNSHYCPICRFQMP 159
           ++MPCLHVFH +CI++WL NSHYCPICRF++P
Sbjct: 210 LQMPCLHVFHGNCIEDWLKNSHYCPICRFEVP 233

BLAST of Tan0015277 vs. NCBI nr
Match: XP_022961194.1 (probable E3 ubiquitin-protein ligase ZFP1 [Cucurbita moschata])

HSP 1 Score: 147.9 bits (372), Expect = 7.5e-32
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 0

Query: 5   ALRPYLAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVML 64
           AL+  L+  F  Y + +D K +A+ IK KWIEIR + + NAFGRVF LT+TLK+W+V M 
Sbjct: 88  ALQNCLSVHFDDYSELVDVKKVADEIKRKWIEIRVREDLNAFGRVFRLTVTLKVWNVGMF 147

Query: 65  HEEQRRRLLDIRSEDGMVPTC--GNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEK 124
           +          R EDG V +C     I+ ML RV FE++E DD +CVIC EE++     +
Sbjct: 148 YNG--------RVEDG-VMSCDRSRGIEMMLMRVRFEEIESDD-VCVICLEELE----RR 207

Query: 125 KNSIVKMPCLHVFHEHCIKEWLNNSHYCPICRFQMP 159
           K S+V MPC HVFH +CI +WL +++ CP+CRFQMP
Sbjct: 208 KKSLVGMPCFHVFHRNCIVKWLADTNSCPVCRFQMP 229

BLAST of Tan0015277 vs. ExPASy TrEMBL
Match: A0A6J1GK53 (ERAD-associated E3 ubiquitin-protein ligase HRD1-like OS=Cucurbita moschata OX=3662 GN=LOC111455016 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.3e-33
Identity = 70/152 (46.05%), Postives = 103/152 (67.76%), Query Frame = 0

Query: 10  LAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVMLHEEQR 69
           L+  FQ+++  IDA+ +A+A+ E+WIEIR++ N  +  RVFP+T+ L +W +V  +E   
Sbjct: 90  LSCSFQNFKPEIDAEPVADALIERWIEIRDEANSRSSDRVFPMTVNLTMWHIVARYE--- 149

Query: 70  RRLLDIRSED---GMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSI 129
              + + S     GMVP CG A+ KML+R++ ED    D ICVIC +E+KN   +     
Sbjct: 150 ---IGVGSGGDGCGMVPACGGAVAKMLRRLKREDEV--DGICVICLDELKNKKKKNGRFG 209

Query: 130 VKMPCLHVFHEHCIKEWLNNSHYCPICRFQMP 159
           ++MPCLHVFH +CI++WL NSHYCPICRF++P
Sbjct: 210 LQMPCLHVFHGNCIEDWLKNSHYCPICRFEVP 233

BLAST of Tan0015277 vs. ExPASy TrEMBL
Match: A0A6J1I8N9 (ERAD-associated E3 ubiquitin-protein ligase HRD1-like OS=Cucurbita maxima OX=3661 GN=LOC111471014 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 9.5e-33
Identity = 70/152 (46.05%), Postives = 102/152 (67.11%), Query Frame = 0

Query: 10  LAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVMLHEEQR 69
           L+  FQ+++  IDA+ +A+A+ E+WIEIR++ N  +  RVFP+T+ L +W +V  +E   
Sbjct: 90  LSSSFQNFKPEIDAEPVADALIERWIEIRDEANSRSSDRVFPMTVNLTMWHIVARYE--- 149

Query: 70  RRLLDIRSED---GMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSI 129
              + + S     GMVP CG A+ KML+R+E ED    D ICVIC +E+K    +     
Sbjct: 150 ---IGVGSGGDGCGMVPACGGAVGKMLRRLEREDEV--DGICVICLDELKKKKKKNGRFG 209

Query: 130 VKMPCLHVFHEHCIKEWLNNSHYCPICRFQMP 159
           ++MPCLHVFH +CI++WL NSHYCPICRF++P
Sbjct: 210 LQMPCLHVFHGNCIEDWLKNSHYCPICRFEVP 233

BLAST of Tan0015277 vs. ExPASy TrEMBL
Match: A0A6J1HDB7 (probable E3 ubiquitin-protein ligase ZFP1 OS=Cucurbita moschata OX=3662 GN=LOC111461780 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 0

Query: 5   ALRPYLAFQFQSYRDYIDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSVVML 64
           AL+  L+  F  Y + +D K +A+ IK KWIEIR + + NAFGRVF LT+TLK+W+V M 
Sbjct: 88  ALQNCLSVHFDDYSELVDVKKVADEIKRKWIEIRVREDLNAFGRVFRLTVTLKVWNVGMF 147

Query: 65  HEEQRRRLLDIRSEDGMVPTC--GNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEK 124
           +          R EDG V +C     I+ ML RV FE++E DD +CVIC EE++     +
Sbjct: 148 YNG--------RVEDG-VMSCDRSRGIEMMLMRVRFEEIESDD-VCVICLEELE----RR 207

Query: 125 KNSIVKMPCLHVFHEHCIKEWLNNSHYCPICRFQMP 159
           K S+V MPC HVFH +CI +WL +++ CP+CRFQMP
Sbjct: 208 KKSLVGMPCFHVFHRNCIVKWLADTNSCPVCRFQMP 229

BLAST of Tan0015277 vs. ExPASy TrEMBL
Match: A0A6J1DWD8 (RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111025085 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.9e-29
Identity = 70/171 (40.94%), Postives = 103/171 (60.23%), Query Frame = 0

Query: 6   LRPYLAFQFQSYRDYIDAKTIANAIKEKWIEIRNKG------------NPNAFGRVFPLT 65
           L+ +L++QF+ Y D I+ + + + I   W+ ++ +G            N NAFGRVFPL 
Sbjct: 23  LQRFLSWQFKEYEDSINIQVMTHQIINHWLHVKREGVAATTQDHNDNSNSNAFGRVFPLE 82

Query: 66  ITLKLWSVVMLHEEQRRRLLDIRSEDGMVPTCGNAIQKMLKRVEFEDMEGDD-QICVICF 125
           +TL LW+ V+ ++           +  MVP     I+KMLK V+FE++  +    CVIC 
Sbjct: 83  VTLHLWNSVIHYD----------YDYAMVPASEVGIEKMLKTVKFEEIVLESATTCVICL 142

Query: 126 EEIKNIGAEKKNS---IVKMPCLHVFHEHCIKEWLNNSHYCPICRFQMPTD 161
           EEI  +  +  +S   ++++PCLHVFH  CIK+WLNNSHYCP CRFQMPT+
Sbjct: 143 EEITTMPNQDIDSGMLLLQIPCLHVFHGRCIKKWLNNSHYCPTCRFQMPTN 183

BLAST of Tan0015277 vs. ExPASy TrEMBL
Match: A0A6J1BQW1 (uncharacterized protein LOC111004784 OS=Momordica charantia OX=3673 GN=LOC111004784 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.3e-29
Identity = 73/170 (42.94%), Postives = 106/170 (62.35%), Query Frame = 0

Query: 5   ALRPYLAFQFQSYRD--YIDAKTIANAIKEKWIEIRNKGNPNA---FGRVFPLTITLKLW 64
           +L  +L+ +F +Y++    +  TI + I   W EI+ +   N     G+V PLT+TL+LW
Sbjct: 91  SLHQFLSSKFPAYQNDTVFNIHTITDKIIATWAEIKQQQEQNLSVFVGKVLPLTVTLRLW 150

Query: 65  SVVMLHEEQRRRLLDIRSEDGMVPTCGNAIQKMLKRVEFE-DMEGDDQI--CVICFEEIK 124
           +VV+   E          +  M+PT   A+++MLKRV+ E   + DDQI  CVIC E+I 
Sbjct: 151 NVVVTRHETP------MEDRFMIPTSDFAVEEMLKRVKVEQQFDDDDQIRSCVICLEDI- 210

Query: 125 NIGAEKKNS------IVKMPCLHVFHEHCIKEWLNNSHYCPICRFQMPTD 161
           ++  EK+ +      +++MPCLHVFHE CIK+WL +SHYCPICRFQMPTD
Sbjct: 211 SVNMEKEENGEVILLLLQMPCLHVFHEECIKKWLKSSHYCPICRFQMPTD 253

BLAST of Tan0015277 vs. TAIR 10
Match: AT5G01980.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 45/165 (27.27%), Postives = 78/165 (47.27%), Query Frame = 0

Query: 4   TALRPYLAFQFQSYRDY--IDAKTIANAIKEKWIEIRNKGNPNAFGRVFPLTITLKLWSV 63
           T  R YLA   +SY      D+  +  + +++ IE R+  + N F  +  L  +    +V
Sbjct: 238 TRYRNYLASPSESYSSMTRFDSPELERSFRQRIIERRHSLSRNIFTGLEDLDFSPYAANV 297

Query: 64  -VMLHEEQRRRLLDIRSED-----GMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEI 123
              L E     LL+  +E      G  P   + ++ + + +  E+      +C IC E  
Sbjct: 298 GDYLDERGFDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIAEEHVMKGLVCAICKELF 357

Query: 124 KNIGAEKKNSIVKMPCLHVFHEHCIKEWLNNSHYCPICRFQMPTD 161
                  +N   ++PCLH++H HCI  WL+  + CP+CR+++PTD
Sbjct: 358 -----SLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYELPTD 397

BLAST of Tan0015277 vs. TAIR 10
Match: AT1G14200.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10
Identity = 28/83 (33.73%), Postives = 42/83 (50.60%), Query Frame = 0

Query: 78  EDGMVPTCGNAIQKMLKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHE 137
           + G  P   + ++ M + V  ED E     C IC +E       K +   +MPC H FH 
Sbjct: 79  KQGRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDE-----WSKGDVAAEMPCKHKFHS 138

Query: 138 HCIKEWLNNSHYCPICRFQMPTD 161
            C++EWL     CP+CR++MP +
Sbjct: 139 KCVEEWLGRHATCPMCRYEMPVE 156

BLAST of Tan0015277 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.8e-10
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 80  GMVPTCGNAIQKM-LKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHEH 139
           G  P   +AI  +   +V  + ++ +   C +C +E      E  + + +MPC HVFH+ 
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEF-----EDGSDVKQMPCKHVFHQD 246

Query: 140 CIKEWLNNSHYCPICRFQMPTD 161
           C+  WL   + CP+CRF++PTD
Sbjct: 247 CLLPWLELHNSCPVCRFELPTD 263

BLAST of Tan0015277 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.8e-10
Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 0

Query: 80  GMVPTCGNAIQKM-LKRVEFEDMEGDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHEH 139
           G+ PT  + +  + +  +E E+ +    +C +C +E+ NIG    N  V++PC H +H  
Sbjct: 280 GLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEM-NIG----NKAVQLPCNHKYHSE 339

Query: 140 CIKEWLNNSHYCPICRFQMPTD 161
           CI  WL   + CP+CR+++PTD
Sbjct: 340 CIVPWLKVRNTCPVCRYELPTD 356

BLAST of Tan0015277 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 62.0 bits (149), Expect = 5.0e-10
Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 80  GMVPTCGNAIQKMLKRVEFEDME-GDDQICVICFEEIKNIGAEKKNSIVKMPCLHVFHEH 139
           G  P   +AI+  L RVE  D   G +  C +C E       E +    +MPC H+FH+ 
Sbjct: 171 GNPPASKSAIES-LPRVEISDCHIGSEANCAVCTEIF-----ETETEAREMPCKHLFHDD 230

Query: 140 CIKEWLNNSHYCPICRFQMPTD 161
           CI  WL+  + CP+CRF++P++
Sbjct: 231 CIVPWLSIRNSCPVCRFELPSE 246

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9CY621.4e-0932.53E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1[more]
Q6AXU42.4e-0931.33E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ... [more]
Q7ZW784.1e-0935.44E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2[more]
Q8LPN75.4e-0932.93E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
Q940T57.1e-0936.59E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ... [more]
Match NameE-valueIdentityDescription
KAG6571896.14.0e-3346.71E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023511497.14.0e-3346.05ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucurbita pepo subsp. pep... [more]
XP_022952293.18.8e-3346.05ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucurbita moschata] >KAG7... [more]
XP_022972455.12.0e-3246.05ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Cucurbita maxima][more]
XP_022961194.17.5e-3248.08probable E3 ubiquitin-protein ligase ZFP1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1GK534.3e-3346.05ERAD-associated E3 ubiquitin-protein ligase HRD1-like OS=Cucurbita moschata OX=3... [more]
A0A6J1I8N99.5e-3346.05ERAD-associated E3 ubiquitin-protein ligase HRD1-like OS=Cucurbita maxima OX=366... [more]
A0A6J1HDB73.6e-3248.08probable E3 ubiquitin-protein ligase ZFP1 OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1DWD82.9e-2940.94RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111025085... [more]
A0A6J1BQW18.3e-2942.94uncharacterized protein LOC111004784 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
Match NameE-valueIdentityDescription
AT5G01980.11.1e-1227.27RING/U-box superfamily protein [more]
AT1G14200.12.3e-1033.73RING/U-box superfamily protein [more]
AT3G19950.13.8e-1032.93RING/U-box superfamily protein [more]
AT5G08139.13.8e-1034.15RING/U-box superfamily protein [more]
AT5G59550.15.0e-1036.59zinc finger (C3HC4-type RING finger) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 108..153
e-value: 1.6E-7
score: 41.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 107..154
e-value: 1.3E-11
score: 44.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 108..154
score: 13.153163
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 107..154
e-value: 0.0017
score: 13.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 75..159
e-value: 2.2E-18
score: 67.7
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 64..160
NoneNo IPR availablePANTHERPTHR15710:SF63RING/U-BOX SUPERFAMILY PROTEINcoord: 64..160
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 88..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0015277.1Tan0015277.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding