Tan0015259 (gene) Snake gourd v1

Overview


Name	Tan0015259
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CAP-Gly domain-containing linker protein 1-like
Location	LG10: 8813964 .. 8816866 (+)
RNA-Seq Expression	Tan0015259
Synteny	Tan0015259

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGTTCATCTTTTTTCCCTAGACAGTTCACACAAGAGGGGGGAACTGAGCAAAGTGGTGAAGCGTGGCATTGGGTTTTGGTTCAAAATTCAAATCTTCGACAAACTCGTCCCCATCTTCTCTCATTTTTCTTCGTTCTTCCTCTCAATTCCCTCCATTCATTTTCCCTCTTTCCTCAATTTTTTGAATTTTGATTTCGATTTCCTTCTGAAACCCTAATTTTCAATTCATCAGATTCTGATTTTGCATATCTTCCCATCTCCATTTCCAGCCAATTCGATCTCTGCTTCAATGGAAAACGCCGACTCTTCCACTCCCTCCGCCCCTGCCCCCGCTCCTCTATCAGCAGTGAGTTCCGTTGTTTTCTTCGTTTTGAGTTTCTTATTGTGGTTGATTTGTTTTTCGAACATACAAACTTGTTCTTGTAATTACTTACTCTGGGCTTTCTGTTTGTATCTAACATTGTTGTTTTTGTTTATCTTGGTGACAGAAAAAAGAGAATCTGACCCCCATTGGGTCGAAAATTACGGTACTATTTTTCTCATTATGTCTTTTTTAATGCTTGTGTACATTAAATTGATTTGTGAATTTTACTGTCGCTTGCGATGTTGAGATTATGAATTTGGATTGTAGGATAGTTGTGGACTAAATTGCTTATTATTTGAAGTTGGGAATAGGAACTGGTTAAGACCTTGACTTCTGTGCGGTATTTGTTTTGGGACTTTTCTGATTGTGAATCGCTGAAGAGTGTTAAGAATTTATATGGAGTAGATTAAATATACCAGAACCTATCAGCTTAAGTTAAATGTTTGGATCCAGTAGTAAGTAGTTTAACAATTAACACGATATGAAAGTAGGAAATTTAAGCCTCTTTTGATAACCATTTGGTTTTTAGTTTTTGTTTTTGAAAATTAAGCTTGTTTTCTCTCAATTTCTCTTCAATAGTTTTCACTTCCCTTGAGAAAGCATTTGAATTCTTTGCTAAATTCTAAAAACAAAAACAAGTTTTTGAAAACCAGTTTTTTTTAGTTTTCAAAATATGGCTTAGTTTTTTAAAATATAGGTAAAATGTAGATAACAAAATAAGTAAATTTTTAGGTGGAAGTTGTATTTCTAGGCTTAATTTTCCAAAACCAAATATAAAAACCAAATGGTTATCAAACAGGATCTTAGAGTTCAAATTTCTTTAGTGTCATTTTCTTCCTGTTGCATATAATTCTCCGCGTGTTGGGTTATGTTCTCATTTCCAACTTTAGAAGTGCGAGGAGTGTTAATACTTAAGATCATATTTAAAAGATTTCTAGTGATGATTTAACAAAGAGTCCATATATTATCATTGCTTCAAAGTTTTCTGGATTCAGGATTGCTGCACTTTAACCCAATCTTCTGAGATTTAATATTTTTGTTCTCAGGAATTGAACGAATCAAGAGCAGAGCTGCTTAATAGAATTCAATCTCTTAAGCAGGTGAAGTCTAAATATACAATGTCCTAACCGTGAGCCTGATTGCGTTGGGAATTCTTGTTCAATTAATTGTTTCTGTTCTCTGATTTTGTGAACTTTCCTTGTGTTTGGGCATTTCAGGATCTCCAGAATTGGAGGTCAAAGCTAGACACGCAGGTTCATACCTACCGCAGTGTAAGTTAATAGTGGTGAACTTCTTGTACTGCTTGTTATCTTCTTCTTCATTCTTTTTTATGTATTCATATATTTCTTAAAAGTAACTTCACCCTGCCAGCATGCTATGTTTTAAGATATTTGTGTTGGTTTTCTTTGATGGGTCTACACGATCCATAAACAAGTTGGTCATCCAAGTGGACTTGTTTGTTTTTTTTTTAATATAAGAAATAATTTCATTGATAAATAAAATGGAGGAGATTCTGCACACCAATAGGTGAATTACAAGAATGACCATCAATTAGAAGTGGACTACTGTAATCAATATCTTGTGGCTTATACGTATGGCCGGTTACTGTAGTCTTGAAATGATGTTGGATAACTGTTCTTGGTAGTTCAAAGAGATTTCAAGTCCGCTATTGTTTCCAGCGTAGGATATTTAATCCCTTAATACCTTGGTTTGGAAGAAAAAAAGAAACGGGATATTAATGAAATAAGAATTTTCCTTTTCTTGGTCATAGATATTCCCTTTTGTTTTTGCTTTTTGTGTCTGTATGTTCCAGCAGCACTTGACAAGTTGACATATACCTTCAATTTTCATACAGGAACTCTCCGAACTCAAGAAATCGCTCAATGTTGAGGTAGAGCAACTTCGAACGGTATGCAATGCTTCACAGATTGAATGTGCTTTTAAACTTTTTTATGCCATTTGGAAGGGTAATAAATTGGCAACATGAAAGCAGGAATTCCAAGAATTAAGGACCACCCTTCAGCAGCAACAAGAAGATGTAACCACTAGCCTGAGGAACTTGGGTGTAAGTTCTAATTCTAATGACTTTCATACACAAATGGTCAGATGAATTTCCTCAAAACAACACCAACCCTCCCAGTCCGACCGTATATGTTAACCGCTATTGAAGAAAAATTATGAATCTTGGCAGCTTCAGGATGTCTCTGTGGACAATAACGAGACTCAACATCGACATCCTGGATCGGAAAGCAGCGATGAGGAAGACGAAGATGAGGCAAAGAAGGATGGAGGACATGGCTTAACAGAGGATAAGGGAAATGAAGCTGAAAATTAAGAGGCACTTTGTAGCACGTACGTTGTAAGTTTTTCATTGCATTAAAAAATAACCTTTAGCTGCCCTCTTGTGTTCGTTATGTCGCGATGGATTTCTACATTTTTCTGTTTTGCATCATGCTCTATTTAGATTTCAATCTTTGTAATGGGATTCTTTTCAATATTTCCCATTGAGGTTTTATGAGAATCTCTATTATCTC

mRNA sequence

AAAAAAGTTCATCTTTTTTCCCTAGACAGTTCACACAAGAGGGGGGAACTGAGCAAAGTGGTGAAGCGTGGCATTGGGTTTTGCCAATTCGATCTCTGCTTCAATGGAAAACGCCGACTCTTCCACTCCCTCCGCCCCTGCCCCCGCTCCTCTATCAGCAAAAAAAGAGAATCTGACCCCCATTGGGTCGAAAATTACGGAATTGAACGAATCAAGAGCAGAGCTGCTTAATAGAATTCAATCTCTTAAGCAGGATCTCCAGAATTGGAGGTCAAAGCTAGACACGCAGGTTCATACCTACCGCAGTGAACTCTCCGAACTCAAGAAATCGCTCAATGTTGAGGTAGAGCAACTTCGAACGGAATTCCAAGAATTAAGGACCACCCTTCAGCAGCAACAAGAAGATGTAACCACTAGCCTGAGGAACTTGGGTCTTCAGGATGTCTCTGTGGACAATAACGAGACTCAACATCGACATCCTGGATCGGAAAGCAGCGATGAGGAAGACGAAGATGAGGCAAAGAAGGATGGAGGACATGGCTTAACAGAGGATAAGGGAAATGAAGCTGAAAATTAAGAGGCACTTTGTAGCACGTACGTTGTAAGTTTTTCATTGCATTAAAAAATAACCTTTAGCTGCCCTCTTGTGTTCGTTATGTCGCGATGGATTTCTACATTTTTCTGTTTTGCATCATGCTCTATTTAGATTTCAATCTTTGTAATGGGATTCTTTTCAATATTTCCCATTGAGGTTTTATGAGAATCTCTATTATCTC

Coding sequence (CDS)

ATGGAAAACGCCGACTCTTCCACTCCCTCCGCCCCTGCCCCCGCTCCTCTATCAGCAAAAAAAGAGAATCTGACCCCCATTGGGTCGAAAATTACGGAATTGAACGAATCAAGAGCAGAGCTGCTTAATAGAATTCAATCTCTTAAGCAGGATCTCCAGAATTGGAGGTCAAAGCTAGACACGCAGGTTCATACCTACCGCAGTGAACTCTCCGAACTCAAGAAATCGCTCAATGTTGAGGTAGAGCAACTTCGAACGGAATTCCAAGAATTAAGGACCACCCTTCAGCAGCAACAAGAAGATGTAACCACTAGCCTGAGGAACTTGGGTCTTCAGGATGTCTCTGTGGACAATAACGAGACTCAACATCGACATCCTGGATCGGAAAGCAGCGATGAGGAAGACGAAGATGAGGCAAAGAAGGATGGAGGACATGGCTTAACAGAGGATAAGGGAAATGAAGCTGAAAATTAA

Protein sequence

MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLDTQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNETQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN

Homology

[Close]

BLAST of Tan0015259 vs. NCBI nr
Match: XP_022973788.1 (uncharacterized protein LOC111472345 [Cucurbita maxima] >XP_022975171.1 uncharacterized protein LOC111474206 [Cucurbita maxima])

HSP 1 Score: 241.1 bits (614), Expect = 6.4e-60
Identity = 135/157 (85.99%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M NADSSTPS PAPAP+SAKKENLTPIG KI ELNESRAELL+RIQ LKQDLQNWR KLD
Sbjct: 1   MANADSSTPSTPAPAPMSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQVHTYRSELSELKKSLN+EVEQLRTEFQELRTTLQQQQEDVTTSLRNLG+QD S DNN+
Sbjct: 61  TQVHTYRSELSELKKSLNLEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGVQDDSKDNNK 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           T+H+HP +ESSD+EDEDE KKDG HGLTE KGNEAE+
Sbjct: 121 TRHQHPVAESSDKEDEDEGKKDGLHGLTECKGNEAEH 157

[Close]

BLAST of Tan0015259 vs. NCBI nr
Match: KAG6597517.1 (hypothetical protein SDJN03_10697, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59
Identity = 135/157 (85.99%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M NADSSTPS PAPAP SAKKENLTPIG KI ELNESRAELL+RIQ LKQDLQNWR KLD
Sbjct: 1   MANADSSTPSTPAPAPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQV+TYRSELSELKKSLNVEVEQLRTEF+ELRTTLQQQQEDVTTSLRNLG+QD S DNN+
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQEDVTTSLRNLGVQDDSKDNNK 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           T+H+HP +ESSD+EDEDE KKDG HGLTE KGNEAEN
Sbjct: 121 TRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN 157

[Close]

BLAST of Tan0015259 vs. NCBI nr
Match: XP_022948034.1 (CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata] >KAG7028975.1 hypothetical protein SDJN02_10158 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.0 bits (606), Expect = 5.4e-59
Identity = 134/157 (85.35%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M NADSSTPS PAP P SAKKENLTPIG KI ELNESRAELL+RIQ LKQDLQNWR KLD
Sbjct: 1   MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQV+TYRSELSELKKSLNVEVEQLRTEF+ELRTTLQQQQEDVTTSLRNLG+QD S DNN+
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQEDVTTSLRNLGVQDDSKDNNK 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           T+H+HP +ESSD+EDEDE KKDG HGLTE KGNEAEN
Sbjct: 121 TRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN 157

[Close]

BLAST of Tan0015259 vs. NCBI nr
Match: XP_023539906.1 (CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.3 bits (599), Expect = 3.5e-58
Identity = 133/157 (84.71%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M +ADSSTPS PAPAP SAKKENLTPIG KI ELNESRAELL+RIQ LKQDLQNWR KLD
Sbjct: 1   MASADSSTPSTPAPAPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQV+TYRSELSELKKSLNVEVEQLRTEF+ELRTTLQQQQEDVTTSLRNLG+QD S DNN+
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQEDVTTSLRNLGVQDDSKDNNK 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           T+H+HP +ESSD+EDEDE KKDG HGLTE KGNE EN
Sbjct: 121 TRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEYEN 157

[Close]

BLAST of Tan0015259 vs. NCBI nr
Match: XP_004134206.1 (CAP-Gly domain-containing linker protein 1 [Cucumis sativus] >KAE8650394.1 hypothetical protein Csa_010955 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57
Identity = 137/157 (87.26%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M ++DSSTPS   PAPLSAKKENLTPIGSKITELNESR+ELLNRIQSLKQDLQNWRSKLD
Sbjct: 1   MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQVHTYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE
Sbjct: 61  TQVHTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           TQH+HP   S D+ED DEAKKD    LTE+KGNEAEN
Sbjct: 121 TQHQHPVG-SPDKEDADEAKKD---NLTEEKGNEAEN 150

[Close]

BLAST of Tan0015259 vs. ExPASy TrEMBL
Match: A0A6J1IDF2 (uncharacterized protein LOC111472345 OS=Cucurbita maxima OX=3661 GN=LOC111474206 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 135/157 (85.99%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M NADSSTPS PAPAP+SAKKENLTPIG KI ELNESRAELL+RIQ LKQDLQNWR KLD
Sbjct: 1   MANADSSTPSTPAPAPMSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQVHTYRSELSELKKSLN+EVEQLRTEFQELRTTLQQQQEDVTTSLRNLG+QD S DNN+
Sbjct: 61  TQVHTYRSELSELKKSLNLEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGVQDDSKDNNK 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           T+H+HP +ESSD+EDEDE KKDG HGLTE KGNEAE+
Sbjct: 121 TRHQHPVAESSDKEDEDEGKKDGLHGLTECKGNEAEH 157

[Close]

BLAST of Tan0015259 vs. ExPASy TrEMBL
Match: A0A6J1G8M8 (CAP-Gly domain-containing linker protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451732 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.6e-59
Identity = 134/157 (85.35%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M NADSSTPS PAP P SAKKENLTPIG KI ELNESRAELL+RIQ LKQDLQNWR KLD
Sbjct: 1   MANADSSTPSTPAPVPTSAKKENLTPIGLKIMELNESRAELLDRIQFLKQDLQNWRLKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQV+TYRSELSELKKSLNVEVEQLRTEF+ELRTTLQQQQEDVTTSLRNLG+QD S DNN+
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEQLRTEFRELRTTLQQQQEDVTTSLRNLGVQDDSKDNNK 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           T+H+HP +ESSD+EDEDE KKDG HGLTE KGNEAEN
Sbjct: 121 TRHQHPVAESSDKEDEDEGKKDGLHGLTEGKGNEAEN 157

[Close]

BLAST of Tan0015259 vs. ExPASy TrEMBL
Match: A0A5D3D134 (CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00970 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.2e-57
Identity = 136/157 (86.62%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M ++DSSTPS   PAPLSAKKENLTPIGSKITELNESR+ELLNRIQSLKQDLQNWRSKLD
Sbjct: 1   MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQV+TYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD NE
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNE 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           TQH+HP   S D+ED DEAKKD   GLTE+KGNEAEN
Sbjct: 121 TQHQHPAG-SRDKEDADEAKKD---GLTEEKGNEAEN 150

[Close]

BLAST of Tan0015259 vs. ExPASy TrEMBL
Match: A0A1S3AY29 (CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483838 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.2e-57
Identity = 136/157 (86.62%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M ++DSSTPS   PAPLSAKKENLTPIGSKITELNESR+ELLNRIQSLKQDLQNWRSKLD
Sbjct: 1   MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQV+TYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD NE
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDTNE 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           TQH+HP   S D+ED DEAKKD   GLTE+KGNEAEN
Sbjct: 121 TQHQHPAG-SRDKEDADEAKKD---GLTEEKGNEAEN 150

[Close]

BLAST of Tan0015259 vs. ExPASy TrEMBL
Match: A0A6J1IY17 (CAP-Gly domain-containing linker protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479493 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.5e-56
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MENADSSTPSAPAPAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKLD 60
           M +ADSS+PS PAPAPLSAK ENLTPIGSKI+ELNESRAELLNRIQSLKQDLQNWRSKLD
Sbjct: 1   MADADSSSPSVPAPAPLSAKNENLTPIGSKISELNESRAELLNRIQSLKQDLQNWRSKLD 60

Query: 61  TQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120
           TQV+TYRSELSELKKSLNVEVE LRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE
Sbjct: 61  TQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE 120

Query: 121 TQHRHPGSESSDEEDEDEAKKDGGHGLTEDKGNEAEN 158
           T+H+HP +E S++ED  EA K+ G G TE+KGNEA N
Sbjct: 121 TRHQHP-AEISEKEDAGEATKE-GCGSTEEKGNEAGN 155

[Close]

BLAST of Tan0015259 vs. TAIR 10
Match: AT4G15790.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to 380 proteins in 121 species: Archae - 4; Bacteria - 107; Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-33
Identity = 75/114 (65.79%), Postives = 95/114 (83.33%), Query Frame = 0


Query: 2   ENADSSTPSAP--APAPLSAKKENLTPIGSKITELNESRAELLNRIQSLKQDLQNWRSKL 61
           + +DS++P AP    +P + KK+N  P+ SK+TELNESRAELLNRIQ+LKQDLQ+WR KL
Sbjct: 4   QTSDSTSPVAPLSVSSPTATKKDNTNPVDSKLTELNESRAELLNRIQNLKQDLQSWRGKL 63

Query: 62  DTQVHTYRSELSELKKSLNVEVEQLRTEFQELRTTLQQQQEDVTTSLRNLGLQD 114
           DTQV  YR ELS LKK+LN+EVEQLR EF++L+TTL QQQ+DV+ SL++LGLQD
Sbjct: 64  DTQVKVYREELSGLKKTLNLEVEQLREEFKDLKTTLNQQQDDVSASLKSLGLQD 117

The following BLAST results are available for this feature:

BLAST of Tan0015259 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0015259 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973788.1	6.4e-60	85.99	uncharacterized protein LOC111472345 [Cucurbita maxima] >XP_022975171.1 uncharac...	[more]
KAG6597517.1	1.8e-59	85.99	hypothetical protein SDJN03_10697, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022948034.1	5.4e-59	85.35	CAP-Gly domain-containing linker protein 1-like [Cucurbita moschata] >KAG7028975...	[more]
XP_023539906.1	3.5e-58	84.71	CAP-Gly domain-containing linker protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_004134206.1	3.0e-57	87.26	CAP-Gly domain-containing linker protein 1 [Cucumis sativus] >KAE8650394.1 hypot...	[more]

BLAST of Tan0015259 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IDF2	3.1e-60	85.99	uncharacterized protein LOC111472345 OS=Cucurbita maxima OX=3661 GN=LOC111474206...	[more]
A0A6J1G8M8	2.6e-59	85.35	CAP-Gly domain-containing linker protein 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3D134	4.2e-57	86.62	CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S3AY29	4.2e-57	86.62	CAP-Gly domain-containing linker protein 1 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1IY17	3.5e-56	84.71	CAP-Gly domain-containing linker protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Tan0015259 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15790.1	4.1e-33	65.79	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..101
None	No IPR available	COILS	Coil	Coil	coord: 31..58
None	No IPR available	GENE3D	1.20.1170.10		coord: 11..114 e-value: 9.5E-7 score: 30.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..157
None	No IPR available	PANTHER	PTHR34681	UVEAL AUTOANTIGEN WITH COILED-COIL/ANKYRIN	coord: 1..141
None	No IPR available	PANTHER	PTHR34681:SF2	UVEAL AUTOANTIGEN WITH COILED-COIL/ANKYRIN	coord: 1..141
None	No IPR available	SUPERFAMILY	75704	Mitotic arrest deficient-like 1, Mad1	coord: 20..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015259.1	Tan0015259.1	mRNA
Tan0015259.2	Tan0015259.2	mRNA