Tan0015234 (gene) Snake gourd v1

Overview


Name	Tan0015234
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	NHL domain protein
Location	LG11: 5354423 .. 5355599 (-)
RNA-Seq Expression	Tan0015234
Synteny	Tan0015234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAAACAAAAATGCCATTTTTTTTTAACTAAAAAAAAAAAAAAAAGATGATGGAGAAATTTGGACCAGGAAATGGAAGATTTACAGAGAGAGAAAAAAACATTTGGCGAATGGGATAAGAATTAATTTTCCAGCGTGTTTTCCGTTTCAATTTTCTCCGATACGGCCGCTCTCATATATTAATCTCAGACGAACATCATCTTCTTCCCTCTCCAAAAAAAAAAAAAAGAAAAGAAAAAAGTTCACCGATTCAATTTCAAACAGAGAGAATAGAGAAGAGAAGAGAGAATCTCTGTGTTAATTGATTTGCAGAAAAGTTTGAAAAAACTTTTCTGCAAATCAATTCCAACAGATCGACATACCTCTCTCTCTCTCTCTCTCTCTAAATGTCTGTTGCTCAATCTCCCGACCTATCTTCCGACGAAAATGTCTTCCACGGCGACGATCTTCACGAGGCCGCCTACGCCAGCCGCGGCTGCTGCTGCTGGATCCCTTGCCTGAGGTCCAATCCCTCGCAGTCCTGGTGGAAGCGGATTAGGGCAGCCGATAACGACGACGAGTGGTGGCTCCGAGGCTGGAAGAGGTTCCGTCAGTGGTCCGAAATCGTCGCCGGGCCTAAATGGAAGACCTTCATTCGTCAATTCCACAAGAATCGCAATCGCCAATCCAATTTCCGCTACGATCCTCTCAGTTACGCTCTCAATTTTGATGAAGGTCCAGCCCACGACGATCCGTTCAGCGACGACTTTATGCGCCGCGATTTCTCCTCTCGATTCGCCGCCATTCCGGCCTCTGCCAAGTCGTCCATGGACCTCGGAAAGGATGGGCCGTCCTTCATTTGACGCCGGCGCGCCGGCTGAACAGATGGATGGATGTATCGTGTGGCTCTGGAATCTCGGTGTGCTCGGCTTCCTCTTGCCGGAGCCGTCGTGCGCGGTGGTCGTCGGAGGCGATTCCGGGGGAGGAGGAGCGGAGGGGGATTAGCATTTTGGGGACGACGGGGATTGTGAATGGTGGGGGTAATTTGTGGCCAGCGTTAAAAACTATAAACTCGGTGATTCCATTTTTCTTTTCTTTTCTTTTTTTTTTTTCATTCTGTTTTTTAAGATTATTTTTTTATTTGTTTATAAAAATATATTTTTTTTCAAATGAAATTATAATGATTTTGTGAAATTT

mRNA sequence

TGGAAAACAAAAATGCCATTTTTTTTTAACTAAAAAAAAAAAAAAAAGATGATGGAGAAATTTGGACCAGGAAATGGAAGATTTACAGAGAGAGAAAAAAACATTTGGCGAATGGGATAAGAATTAATTTTCCAGCGTGTTTTCCGTTTCAATTTTCTCCGATACGGCCGCTCTCATATATTAATCTCAGACGAACATCATCTTCTTCCCTCTCCAAAAAAAAAAAAAAGAAAAGAAAAAAGTTCACCGATTCAATTTCAAACAGAGAGAATAGAGAAGAGAAGAGAGAATCTCTGTGTTAATTGATTTGCAGAAAAGTTTGAAAAAACTTTTCTGCAAATCAATTCCAACAGATCGACATACCTCTCTCTCTCTCTCTCTCTCTAAATGTCTGTTGCTCAATCTCCCGACCTATCTTCCGACGAAAATGTCTTCCACGGCGACGATCTTCACGAGGCCGCCTACGCCAGCCGCGGCTGCTGCTGCTGGATCCCTTGCCTGAGGTCCAATCCCTCGCAGTCCTGGTGGAAGCGGATTAGGGCAGCCGATAACGACGACGAGTGGTGGCTCCGAGGCTGGAAGAGGTTCCGTCAGTGGTCCGAAATCGTCGCCGGGCCTAAATGGAAGACCTTCATTCGTCAATTCCACAAGAATCGCAATCGCCAATCCAATTTCCGCTACGATCCTCTCAGTTACGCTCTCAATTTTGATGAAGGTCCAGCCCACGACGATCCGTTCAGCGACGACTTTATGCGCCGCGATTTCTCCTCTCGATTCGCCGCCATTCCGGCCTCTGCCAAGTCGTCCATGGACCTCGGAAAGGATGGGCCGTCCTTCATTTGACGCCGGCGCGCCGGCTGAACAGATGGATGGATGTATCGTGTGGCTCTGGAATCTCGGTGTGCTCGGCTTCCTCTTGCCGGAGCCGTCGTGCGCGGTGGTCGTCGGAGGCGATTCCGGGGGAGGAGGAGCGGAGGGGGATTAGCATTTTGGGGACGACGGGGATTGTGAATGGTGGGGGTAATTTGTGGCCAGCGTTAAAAACTATAAACTCGGTGATTCCATTTTTCTTTTCTTTTCTTTTTTTTTTTTCATTCTGTTTTTTAAGATTATTTTTTTATTTGTTTATAAAAATATATTTTTTTTCAAATGAAATTATAATGATTTTGTGAAATTT

Coding sequence (CDS)

ATGTCTGTTGCTCAATCTCCCGACCTATCTTCCGACGAAAATGTCTTCCACGGCGACGATCTTCACGAGGCCGCCTACGCCAGCCGCGGCTGCTGCTGCTGGATCCCTTGCCTGAGGTCCAATCCCTCGCAGTCCTGGTGGAAGCGGATTAGGGCAGCCGATAACGACGACGAGTGGTGGCTCCGAGGCTGGAAGAGGTTCCGTCAGTGGTCCGAAATCGTCGCCGGGCCTAAATGGAAGACCTTCATTCGTCAATTCCACAAGAATCGCAATCGCCAATCCAATTTCCGCTACGATCCTCTCAGTTACGCTCTCAATTTTGATGAAGGTCCAGCCCACGACGATCCGTTCAGCGACGACTTTATGCGCCGCGATTTCTCCTCTCGATTCGCCGCCATTCCGGCCTCTGCCAAGTCGTCCATGGACCTCGGAAAGGATGGGCCGTCCTTCATTTGA

Protein sequence

MSVAQSPDLSSDENVFHGDDLHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEWWLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSDDFMRRDFSSRFAAIPASAKSSMDLGKDGPSFI

Homology

[Close]

BLAST of Tan0015234 vs. NCBI nr
Match: XP_038889212.1 (uncharacterized protein LOC120079097 [Benincasa hispida])

HSP 1 Score: 302.4 bits (773), Expect = 2.2e-78
Identity = 134/151 (88.74%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVFHGDDLHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEWW 60
           MS+AQSPDLSSDEN FHGDDLH+AA+ SRGCC W+PCLRSNPSQSWW+RIRAADNDDEWW
Sbjct: 1   MSLAQSPDLSSDENAFHGDDLHDAAFVSRGCCLWLPCLRSNPSQSWWERIRAADNDDEWW 60

Query: 61  LRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSDD 120
           LRGWKRFR+WSEI+AGPKWKTFIRQF+KNRNRQS FRYDPLSY+LNFDEGPAHDDPFSDD
Sbjct: 61  LRGWKRFREWSEIIAGPKWKTFIRQFNKNRNRQSTFRYDPLSYSLNFDEGPAHDDPFSDD 120

Query: 121 FMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
            +RRDFS+RFAAIPASAKSSMDLGKDGP FI
Sbjct: 121 LVRRDFSTRFAAIPASAKSSMDLGKDGPPFI 151

[Close]

BLAST of Tan0015234 vs. NCBI nr
Match: XP_031741765.1 (uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical protein Csa_008790 [Cucumis sativus])

HSP 1 Score: 291.6 bits (745), Expect = 3.9e-75
Identity = 132/152 (86.84%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVF-HGDDLHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEW 60
           MS+A SPDLSSDEN F H DDLH+A +A+RGCC WIPCLRSN SQSWW+RIRAADNDDEW
Sbjct: 1   MSLAHSPDLSSDENGFLHNDDLHDAVFATRGCCLWIPCLRSNSSQSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSD 120
           WL+GWKRFR+WSEIVAGPKWKTFIRQFHKNRNRQS FRYDPLSY+LNFDEGPAHDDPF+D
Sbjct: 61  WLKGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHDDPFTD 120

Query: 121 DFMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
           DF+RRDFS+RFAAIPASAKSSMDLGKD PSFI
Sbjct: 121 DFVRRDFSTRFAAIPASAKSSMDLGKDSPSFI 152

[Close]

BLAST of Tan0015234 vs. NCBI nr
Match: KAG6602448.1 (hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033131.1 hypothetical protein SDJN02_07184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 134/152 (88.16%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVFHGDD-LHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEW 60
           MSV+QSPDLSSD N FH DD LHEAA+ASRGCC W+PCLRSNPS+SWW+RIRAADNDDEW
Sbjct: 1   MSVSQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSD 120
           WLRGWKRFR WSEIVAGPKWKTFIRQFHKNR+RQS +RYDPLSYALNFDEGPA DDPFS+
Sbjct: 61  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDEGPALDDPFSE 120

Query: 121 DFMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
           DFMRRDFS RFA+IPASAKSSMDLGKDGPSFI
Sbjct: 121 DFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

[Close]

BLAST of Tan0015234 vs. NCBI nr
Match: XP_022961939.1 (uncharacterized protein LOC111462557 [Cucurbita moschata])

HSP 1 Score: 289.3 bits (739), Expect = 2.0e-74
Identity = 134/152 (88.16%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVFHGDD-LHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEW 60
           MSV QSPDLSSD N FH DD LHEAA+ASRGCC W+PCLRSNPS+SWW+RIRAADNDDEW
Sbjct: 1   MSVPQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSD 120
           WLRGWKRFR WSEIVAGPKWKTFIRQFHKNR+RQS +RYDPLSYALNFDEGPA DDPFS+
Sbjct: 61  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDEGPALDDPFSE 120

Query: 121 DFMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
           DFMRRDFS RFA+IPASAKSSMDLGKDGPSFI
Sbjct: 121 DFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

[Close]

BLAST of Tan0015234 vs. NCBI nr
Match: XP_023533538.1 (uncharacterized protein LOC111795380 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.1 bits (736), Expect = 4.4e-74
Identity = 133/152 (87.50%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVFHGDD-LHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEW 60
           MSV+QSPDLSSD N FH DD LHEAA+ASRGCC W+PCLRS+PS+SWW+RIRAADNDDEW
Sbjct: 1   MSVSQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSSPSKSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSD 120
           WLRGWKRFR WSEIVAGPKWKTFIRQFHKNR+RQS +RYDPLSYALNFDEGPA DDPFS+
Sbjct: 61  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDEGPALDDPFSE 120

Query: 121 DFMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
           DFMRRDFS RFA+IPASAKSSMDLGKDGPSFI
Sbjct: 121 DFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

[Close]

BLAST of Tan0015234 vs. ExPASy TrEMBL
Match: A0A0A0KRY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 132/152 (86.84%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVF-HGDDLHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEW 60
           MS+A SPDLSSDEN F H DDLH+A +A+RGCC WIPCLRSN SQSWW+RIRAADNDDEW
Sbjct: 1   MSLAHSPDLSSDENGFLHNDDLHDAVFATRGCCLWIPCLRSNSSQSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSD 120
           WL+GWKRFR+WSEIVAGPKWKTFIRQFHKNRNRQS FRYDPLSY+LNFDEGPAHDDPF+D
Sbjct: 61  WLKGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHDDPFTD 120

Query: 121 DFMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
           DF+RRDFS+RFAAIPASAKSSMDLGKD PSFI
Sbjct: 121 DFVRRDFSTRFAAIPASAKSSMDLGKDSPSFI 152

[Close]

BLAST of Tan0015234 vs. ExPASy TrEMBL
Match: A0A6J1HFG4 (uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC111462557 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.5e-75
Identity = 134/152 (88.16%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVFHGDD-LHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEW 60
           MSV QSPDLSSD N FH DD LHEAA+ASRGCC W+PCLRSNPS+SWW+RIRAADNDDEW
Sbjct: 1   MSVPQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKSWWERIRAADNDDEW 60

Query: 61  WLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSD 120
           WLRGWKRFR WSEIVAGPKWKTFIRQFHKNR+RQS +RYDPLSYALNFDEGPA DDPFS+
Sbjct: 61  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDEGPALDDPFSE 120

Query: 121 DFMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
           DFMRRDFS RFA+IPASAKSSMDLGKDGPSFI
Sbjct: 121 DFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

[Close]

BLAST of Tan0015234 vs. ExPASy TrEMBL
Match: A0A6J1JTQ3 (uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.0e-73
Identity = 131/152 (86.18%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVFHGDD-LHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEW 60
           MSV+QSPDLSSD N FH DD LHEAA+ASRGCC W+PCLRSNPS++WW+RIRAADNDDEW
Sbjct: 1   MSVSQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKTWWERIRAADNDDEW 60

Query: 61  WLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSD 120
           WLRGWKRFR WSEIVAGPKWKTFIRQFHKNR+RQS +RYDPLSYALNFD+GPA DDPF +
Sbjct: 61  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKNRHRQSTYRYDPLSYALNFDDGPALDDPFRE 120

Query: 121 DFMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
           DFMRRDFS RFA+IPASAKSSMDLGKDGPSFI
Sbjct: 121 DFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

[Close]

BLAST of Tan0015234 vs. ExPASy TrEMBL
Match: A0A1S4E267 (uncharacterized protein LOC107991628 OS=Cucumis melo OX=3656 GN=LOC107991628 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.8e-73
Identity = 127/151 (84.11%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVFHGDDLHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEWW 60
           MS+AQSPD SSDEN FH +DLH+A +A+ GCC WIPCLRSN SQSWW+RIRAADNDDEWW
Sbjct: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60

Query: 61  LRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSDD 120
           LRGWKRFR+WSEIVAGPKWKTFIRQFHKNRNRQS FRYDPLSY+LNFDEGPAH+D F+DD
Sbjct: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120

Query: 121 FMRRDFSSRFAAIPASAKSSMDLGKDGPSFI 152
           F+RRDFS+RFAAIPASAKSSMDL KD PS I
Sbjct: 121 FVRRDFSTRFAAIPASAKSSMDLVKDSPSLI 151

[Close]

BLAST of Tan0015234 vs. ExPASy TrEMBL
Match: A0A5A7T228 (Putative NHL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00830 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.7e-71
Identity = 124/146 (84.93%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MSVAQSPDLSSDENVFHGDDLHEAAYASRGCCCWIPCLRSNPSQSWWKRIRAADNDDEWW 60
           MS+AQSPD SSDEN FH +DLH+A +A+ GCC WIPCLRSN SQSWW+RIRAADNDDEWW
Sbjct: 1   MSLAQSPDFSSDENGFHSNDLHDAVFATHGCCFWIPCLRSNSSQSWWERIRAADNDDEWW 60

Query: 61  LRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNRQSNFRYDPLSYALNFDEGPAHDDPFSDD 120
           LRGWKRFR+WSEIVAGPKWKTFIRQFHKNRNRQS FRYDPLSY+LNFDEGPAH+D F+DD
Sbjct: 61  LRGWKRFREWSEIVAGPKWKTFIRQFHKNRNRQSTFRYDPLSYSLNFDEGPAHEDSFTDD 120

Query: 121 FMRRDFSSRFAAIPASAKSSMDLGKD 147
           F+RRDFS+RFAAIPASAKSSMDL KD
Sbjct: 121 FVRRDFSTRFAAIPASAKSSMDLVKD 146

[Close]

BLAST of Tan0015234 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 135.6 bits (340), Expect = 3.4e-32
Identity = 72/150 (48.00%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 19  DDLHEAAYASRGCCCWIPCLRSN----PSQS-WWKRIRAADN---DDEWWLRGWKRFRQW 78
           D++HEA +A RGCC  +PCL S+    P+ S WW+RIR  D    D+ WW+ GW + R+W
Sbjct: 598 DEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSGWMKMREW 657

Query: 79  SEIVAGPKWKTFIRQFHK------------NRNRQSNFRYDPLSYALNFDEGPAHDDPFS 138
           SEIVAGPKWKTFIR+F +            NR    +FRYD  SY+LNFD+G      F 
Sbjct: 658 SEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLNFDDG-KQTGHFE 717

Query: 139 DDFMRRDFSSRFAA--IPASAKSSMDLGKD 147
           D+F  RD+S RFAA  +P S K S+D   D
Sbjct: 718 DEFPYRDYSMRFAAPSLPVSTKCSIDFDND 746

[Close]

BLAST of Tan0015234 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 134.0 bits (336), Expect = 9.8e-32
Identity = 75/177 (42.37%), Postives = 99/177 (55.93%), Query Frame = 0


Query: 5   QSPDLSSDENVFHGDDLHEAAYASRGCCCWIPCLRSNPSQS-----WWKRIRAADN---D 64
           QSP ++    V   DD+HEA +A RGCC  +PCL S+   +     WW+RI   D    D
Sbjct: 4   QSPPIA---EVDATDDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPD 63

Query: 65  DEWWLRGWKRFRQWSEIVAGPKWKTFIRQFHKNR----------------------NR-- 124
           + WW+RGW+R R+WSE+VAGP+WKT+IR+F ++                       NR  
Sbjct: 64  ERWWIRGWRRMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSS 123

Query: 125 -QSNFRYDPLSYALNFDEGPAHDDPFSDDFMRRDFSSRFAA--IPASAKSSMDLGKD 147
            Q  FRYD LSY+LNFD+G      F D+F  RD+S RFAA  +P S K S+D   D
Sbjct: 124 DQGKFRYDQLSYSLNFDDG-NQTGHFDDEFPYRDYSMRFAAPSLPVSTKCSIDFDSD 176

[Close]

BLAST of Tan0015234 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 6.6e-20
Identity = 49/118 (41.53%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 37  CLRSNPSQSWWKRI-RAADNDDEWWLRGWKRFRQWSEIVAGPKWKTFIRQFHKNRNR--- 96
           C  +    SWW+RI R    +  WW+R + + R+WSEIVAGP+WKTFIR+F+++  R   
Sbjct: 15  CCSTTVKSSWWQRIHRNNHQEPRWWVRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQD 74

Query: 97  ---QSNFRYDPLSYALNFDEGPAHDDPFSDDFMRRDFSSRFAAIP-ASAKSSMDLGKD 147
                 FRYDP+SY L+F++    DD  +     R FS R+A++P AS KS   +  D
Sbjct: 75  WDDSDKFRYDPVSYTLSFEDEDKDDDDEAGVGGVRSFSMRYASVPVASGKSPAVISVD 132

[Close]

BLAST of Tan0015234 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 92.8 bits (229), Expect = 2.5e-19
Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 31  CCCWIPCLRSNPS----QSWWKRIRAAD---------NDDEWWLRGWKRFRQWSEIVAGP 90
           CCC+    RS  S     S W RIR  D         ++  WW+R   + R+WSEIVAGP
Sbjct: 20  CCCFPSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWWIRASLKIREWSEIVAGP 79

Query: 91  KWKTFIRQFHKNRNR------QSNFRYDPLSYALNFDEGPAHDDPFSDDFM----RRDFS 135
           +WKTFIR+F+++  R         F+YDPLSY+LNFD     DD   D+++     R FS
Sbjct: 80  RWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFD-----DDDEEDEYVGLGGLRSFS 139

[Close]

BLAST of Tan0015234 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 4.9e-07
Identity = 29/83 (34.94%), Postives = 40/83 (48.19%), Query Frame = 0


Query: 43  SQSWWKRIRAADNDDEWWLRGWKRFRQWSEIVAGPKWKTFIRQF---HKNRNRQSNFRYD 102
           S+  W      +    W     K  ++ SE +AGPKWK FIR F    K   R  +F YD
Sbjct: 42  SRGGWSGCLQEERRGNWGSEKLKGLKEISEKIAGPKWKNFIRSFSSGRKKMRRDVDFTYD 101

Query: 103 PLSYALNFDEGPAHDDPFSDDFM 123
             +Y+LNFD+G    D   + F+
Sbjct: 102 LKNYSLNFDDGGDGKDSSPERFV 124

The following BLAST results are available for this feature:

BLAST of Tan0015234 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0015234 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889212.1	2.2e-78	88.74	uncharacterized protein LOC120079097 [Benincasa hispida]	[more]
XP_031741765.1	3.9e-75	86.84	uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical ...	[more]
KAG6602448.1	1.1e-74	88.16	hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022961939.1	2.0e-74	88.16	uncharacterized protein LOC111462557 [Cucurbita moschata]	[more]
XP_023533538.1	4.4e-74	87.50	uncharacterized protein LOC111795380 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0015234 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRY7	1.9e-75	86.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1	[more]
A0A6J1HFG4	9.5e-75	88.16	uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC1114625...	[more]
A0A6J1JTQ3	1.0e-73	86.18	uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422...	[more]
A0A1S4E267	6.8e-73	84.11	uncharacterized protein LOC107991628 OS=Cucumis melo OX=3656 GN=LOC107991628 PE=...	[more]
A0A5A7T228	3.7e-71	84.93	Putative NHL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Tan0015234 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14890.1	3.4e-32	48.00	NHL domain-containing protein	[more]
AT3G01430.1	9.8e-32	42.37	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT3G48020.1	6.6e-20	41.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G62865.1	2.5e-19	41.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25240.1	4.9e-07	34.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076:SF1	NHL DOMAIN PROTEIN	coord: 10..150
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 10..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015234.1	Tan0015234.1	mRNA