Tan0015101 (gene) Snake gourd v1

Overview


Name	Tan0015101
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Wound-responsive family protein
Location	LG02: 2241659 .. 2242981 (-)
RNA-Seq Expression	Tan0015101
Synteny	Tan0015101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATACCGGTGAACGAGTTTCAGGATTTTTCATAACTATTCGATTTAAGAACTTTTCAAGTGCTTGAGGTTGAAGATGAGTTACCTTAACAGAGTTGGAATGGCGGCGAGCGTGGCGGTGGCTCAGGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGTGAGAATCCGGCGGATCTCCGGCCGCTTTCGAGTTTGGTCGGATCTGAAGGTCCCGGAGCCGTCCGGAGCTGTGACGCCGACGAGAGGATAGCGCAGACAGATGATTCTCTTCGGCGAGTTATGTACTTGAACTGTTGGGGCCAGGGTTGATCTGGCTGCTAGGTTACTGTTGGTGACATATGAAGCGATCTGATCGCCGGCCGGTGATCGGGGTCGGACTCGGGGGGGCTACTCAAGGCGAGTTGAAATTCAAGGTATTTGATCTGGAATTGATGCGATGAAGATGAGGAATTGTGATCGATAACTTGAAAAGTATTTGGAAGGATTTCGCTGTTGTAGCTTTGAGATAATTGTACAGATAAGGGGAATGGGTCGGTTTCCTTGAATAATAGAAAATCTTTAAATTGAAGTTTCTTGTGCCGTTAATTAAGCTTTAAATTTAACTGAACTGAAGCAACTGGTGGCGATCGAAACGATCAAATTCAGATCTGTGTAAGTTGCTTGATGAATCGAAAACTTATTTGGGTGTGAGCCAATTTTATTGTTTAAAAGCCCGCATGTTTCAGAACTTCCACAGTAGACAGGAAATTTTATGAACTTGAAATCAAAGAACTTAGTCAATCTGCAGAAAAAGAACAAGCAAACCAAGATGACGAACTGACGAAGCGGATCAATTAGACTCATTCAGAGTCTGTTTGATCATGTTCTCGTTTCTTATTTATTGAGAATTTTCTGTTTTCTTGATTCCGGCACGTCTATGAATGGAATTTCTTGTCTTGCTGTTCGCCCTTCAGGTCGTGAATTTTCAGATGGTTTCTAAAACAGCTGTCATCTGAATGATTTCAAACTGTACTTCAAGAATTTCCTCTCAGTTTTCTTTCACTTCTGAATTCATCAGATACCGCAAAAAACTCCATAATCTTATCAAGCACTTGAAATGGAGAAGTTTTGACAGTAAAGAACAGGATTGGTTTTAACATCACTGTTTAATAATACGTGGCCAAACAGCCACAAAATGATTTTTGATCCTTTCAAAATCACTTTATTCTTCCACAAATGTGCTTCCAAGATTTCCAAATGTAAGCCTTGAAAAGTATTTACAAACTTCAATTCCCAAA

mRNA sequence

GCAATACCGGTGAACGAGTTTCAGGATTTTTCATAACTATTCGATTTAAGAACTTTTCAAGTGCTTGAGGTTGAAGATGAGTTACCTTAACAGAGTTGGAATGGCGGCGAGCGTGGCGGTGGCTCAGGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGTGAGAATCCGGCGGATCTCCGGCCGCTTTCGAGTTTGGTCGGATCTGAAGGTCCCGGAGCCGTCCGGAGCTGTGACGCCGACGAGAGGATAGCGCAGACAGATGATTCTCTTCGGCGAGTTATGTACTTGAACTGTTGGGGCCAGGGTTGATCTGGCTGCTAGGTTACTGTTGGTGACATATGAAGCGATCTGATCGCCGGCCGGTGATCGGGGTCGGACTCGGGGGGGCTACTCAAGGCGAGTTGAAATTCAAGGTATTTGATCTGGAATTGATGCGATGAAGATGAGGAATTGTGATCGATAACTTGAAAAGTATTTGGAAGGATTTCGCTGTTGTAGCTTTGAGATAATTGTACAGATAAGGGGAATGGGTCGGTTTCCTTGAATAATAGAAAATCTTTAAATTGAAGTTTCTTGTGCCGTTAATTAAGCTTTAAATTTAACTGAACTGAAGCAACTGGTGGCGATCGAAACGATCAAATTCAGATCTGTGTAAGTTGCTTGATGAATCGAAAACTTATTTGGGTGTGAGCCAATTTTATTGTTTAAAAGCCCGCATGTTTCAGAACTTCCACAGTAGACAGGAAATTTTATGAACTTGAAATCAAAGAACTTAGTCAATCTGCAGAAAAAGAACAAGCAAACCAAGATGACGAACTGACGAAGCGGATCAATTAGACTCATTCAGAGTCTGTTTGATCATGTTCTCGTTTCTTATTTATTGAGAATTTTCTGTTTTCTTGATTCCGGCACGTCTATGAATGGAATTTCTTGTCTTGCTGTTCGCCCTTCAGGTCGTGAATTTTCAGATGGTTTCTAAAACAGCTGTCATCTGAATGATTTCAAACTGTACTTCAAGAATTTCCTCTCAGTTTTCTTTCACTTCTGAATTCATCAGATACCGCAAAAAACTCCATAATCTTATCAAGCACTTGAAATGGAGAAGTTTTGACAGTAAAGAACAGGATTGGTTTTAACATCACTGTTTAATAATACGTGGCCAAACAGCCACAAAATGATTTTTGATCCTTTCAAAATCACTTTATTCTTCCACAAATGTGCTTCCAAGATTTCCAAATGTAAGCCTTGAAAAGTATTTACAAACTTCAATTCCCAAA

Coding sequence (CDS)

ATGAGTTACCTTAACAGAGTTGGAATGGCGGCGAGCGTGGCGGTGGCTCAGGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGTGAGAATCCGGCGGATCTCCGGCCGCTTTCGAGTTTGGTCGGATCTGAAGGTCCCGGAGCCGTCCGGAGCTGTGACGCCGACGAGAGGATAGCGCAGACAGATGATTCTCTTCGGCGAGTTATGTACTTGAACTGTTGGGGCCAGGGTTGA

Protein sequence

MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEGPGAVRSCDADERIAQTDDSLRRVMYLNCWGQG

Homology

[Close]

BLAST of Tan0015101 vs. NCBI nr
Match: KAG7011951.1 (hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
          PGAVRS DADER+AQT+DSLRRVMYLNCWGQG
Sbjct: 61 PGAVRSLDADERMAQTEDSLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. NCBI nr
Match: KAG6572339.1 (hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.4 bits (459), Expect = 3.5e-42
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
          PGAVR+ DADER+AQT+DSLRRVMYLNCWGQG
Sbjct: 61 PGAVRNLDADERMAQTEDSLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. NCBI nr
Match: KAE8645762.1 (hypothetical protein Csa_020269 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 6.6e-41
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
           G+VRSCD DERIAQ++DSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. NCBI nr
Match: KAA0031600.1 (wound-responsive family protein [Cucumis melo var. makuwa] >TYK07052.1 wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.2 bits (448), Expect = 6.6e-41
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
           G+VRSCD DERIAQ++DSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. NCBI nr
Match: KAG6589197.1 (hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022897.1 hypothetical protein SDJN02_16633, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKS RQGR+LLSSGENPADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSFRQGRKLLSSGENPADLRPLSSLVGSEG 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
          P AV+S DA ERIAQ+++SLRRVMYLNCWGQG
Sbjct: 61 PEAVQSFDAAERIAQSEESLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. ExPASy TrEMBL
Match: A0A5A7SLJ2 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003700 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.2e-41
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
           G+VRSCD DERIAQ++DSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. ExPASy TrEMBL
Match: A0A0A0K6Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.2e-41
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
           G+VRSCD DERIAQ++DSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. ExPASy TrEMBL
Match: A0A2N9HZV9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.9e-24
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNRV MAA VAV QG T+ GHKWKSG+KS++  ++ L SG + +DLRPLS ++GS+ 
Sbjct: 1  MSYLNRVWMAAGVAVVQGKTDQGHKWKSGIKSVQLRKQKLFSGNDTSDLRPLSGMIGSDF 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
           G + + DADER    D+SLRRVMYLNCWGQG
Sbjct: 61 QGFLGNSDADERPMHADESLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. ExPASy TrEMBL
Match: A0A5N6RB28 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014541 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-23
Identity = 58/92 (63.04%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSYLNR+ MAASVAV QGHT+ G K K GLKSL+ G+R   SG + ADLRP+S ++G + 
Sbjct: 1  MSYLNRIWMAASVAVVQGHTDQGRKVKPGLKSLQLGKRKFFSGSDSADLRPISGMIGLDF 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
           G + S DADER  Q ++SLRRVMYLNCWGQG
Sbjct: 61 AGFLGSSDADERPRQAEESLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. ExPASy TrEMBL
Match: A0A6A1VB48 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G020117 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.5e-22
Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60
          MSY+NRV MAASVAV QGH + G K KSG+ SL+ GRR   SG + +D+RPLS ++GS+ 
Sbjct: 1  MSYINRVWMAASVAVVQGHRDQGCKLKSGVDSLQHGRRKFFSGNDSSDIRPLSGMMGSDL 60

Query: 61 PGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
           G + + D+DER  Q D+SLRRVMYLNCWGQG
Sbjct: 61 DGFLGNTDSDERRRQADESLRRVMYLNCWGQG 92

[Close]

BLAST of Tan0015101 vs. TAIR 10
Match: AT4G28240.1 (Wound-responsive family protein )

HSP 1 Score: 70.9 bits (172), Expect = 6.2e-13
Identity = 45/94 (47.87%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSS--LVGS 60
          MSYLN+V MAAS    QG+ + G K KSGL S  + +R LSS     DLRPL++  L G 
Sbjct: 1  MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRLSS-----DLRPLAAADLTGD 60

Query: 61 EGPGAVRSCDADERIAQTDDSLRRVMYLNCWGQG 93
            P   R   +    +  D+SLR+VMYLNCW QG
Sbjct: 61 SLPSEERRRTSS---STPDESLRQVMYLNCWAQG 86

The following BLAST results are available for this feature:

BLAST of Tan0015101 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0015101 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011951.1	1.6e-42	96.74	hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6572339.1	3.5e-42	95.65	hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8645762.1	6.6e-41	93.48	hypothetical protein Csa_020269 [Cucumis sativus]	[more]
KAA0031600.1	6.6e-41	93.48	wound-responsive family protein [Cucumis melo var. makuwa] >TYK07052.1 wound-res...	[more]
KAG6589197.1	1.1e-38	90.22	hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Tan0015101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLJ2	3.2e-41	93.48	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0K6Z3	3.2e-41	93.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1	[more]
A0A2N9HZV9	7.9e-24	61.96	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1	[more]
A0A5N6RB28	1.8e-23	63.04	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014541 PE=4 SV=1	[more]
A0A6A1VB48	2.5e-22	60.87	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G020117 PE=4 SV=1	[more]

BLAST of Tan0015101 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28240.1	6.2e-13	47.87	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 9..91 e-value: 3.5E-16 score: 60.0
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 1..92
None	No IPR available	PANTHER	PTHR33090:SF38	DUF3774 DOMAIN PROTEIN	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015101.1	Tan0015101.1	mRNA