Tan0015065 (gene) Snake gourd v1

Overview


Name	Tan0015065
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	E3 ubiquitin-protein ligase RNF181-like
Location	LG03: 42472119 .. 42472823 (-)
RNA-Seq Expression	Tan0015065
Synteny	Tan0015065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCACTACTTCCACACCCATTCAGTATCGTCTCTACGGCGGCGACACCACCGCCTCCTCCGCCCAACGTTCCCACCAAGTTCTGGAAGTCCGATTACGCTATCTCTGCCGTCTGATCTACGTTTCTCCCTCCGCCGGAGTTCCTCCCCAAACCATCCATGAAACCGCACCCACCCTACTGAAAAATGCTCTGTTCCATCTCTCTCTGCGCCAACTCCAGGATCCCTTGTCCTACGTCACCCAGTTTCTCTCTTCACTCAACATCCGCGCCGCTATTTCCGATGTCATTGCTCCGAATATCGCGTTCTTCATCACCCAAATCTCCGGCGGAAACAGAGAGACGAACTTCCACATCGTCGCGGAGATCGATTTCATCCGACTGATCACCTGGATGGGAACAACTCCTGAATCGTACCACGAATGGACCAACGGCGGTCCGGTGGTGGAGGAGACGGTGGTTCTGGAAGAGGCTACGCCGGCGATGGAGAGACTGAGAATGGAGAAATTAGAAGAGAATGAGGAAGATGATGAATTTGGGGATTGCAGTATCTGTTTGGATGAAATGAATTGCAAGAAGAGAGAGGTGATAAAGATTCCCTGTGGGCATGTGTATCATCAATCATGCATCTTCACGTGGCTTAACACTAACAATTCTTGTCCTTTGTGTAGAAGGCCATTGCCATTGGAGAACTCACACTGA

mRNA sequence

ATGTCTTTCACTACTTCCACACCCATTCAGTATCGTCTCTACGGCGGCGACACCACCGCCTCCTCCGCCCAACGTTCCCACCAAGTTCTGGAAGTCCGATTACGCTATCTCTGCCGTCTGATCTACGTTTCTCCCTCCGCCGGAGTTCCTCCCCAAACCATCCATGAAACCGCACCCACCCTACTGAAAAATGCTCTGTTCCATCTCTCTCTGCGCCAACTCCAGGATCCCTTGTCCTACGTCACCCAGTTTCTCTCTTCACTCAACATCCGCGCCGCTATTTCCGATGTCATTGCTCCGAATATCGCGTTCTTCATCACCCAAATCTCCGGCGGAAACAGAGAGACGAACTTCCACATCGTCGCGGAGATCGATTTCATCCGACTGATCACCTGGATGGGAACAACTCCTGAATCGTACCACGAATGGACCAACGGCGGTCCGGTGGTGGAGGAGACGGTGGTTCTGGAAGAGGCTACGCCGGCGATGGAGAGACTGAGAATGGAGAAATTAGAAGAGAATGAGGAAGATGATGAATTTGGGGATTGCAGTATCTGTTTGGATGAAATGAATTGCAAGAAGAGAGAGGTGATAAAGATTCCCTGTGGGCATGTGTATCATCAATCATGCATCTTCACGTGGCTTAACACTAACAATTCTTGTCCTTTGTGTAGAAGGCCATTGCCATTGGAGAACTCACACTGA

Coding sequence (CDS)

ATGTCTTTCACTACTTCCACACCCATTCAGTATCGTCTCTACGGCGGCGACACCACCGCCTCCTCCGCCCAACGTTCCCACCAAGTTCTGGAAGTCCGATTACGCTATCTCTGCCGTCTGATCTACGTTTCTCCCTCCGCCGGAGTTCCTCCCCAAACCATCCATGAAACCGCACCCACCCTACTGAAAAATGCTCTGTTCCATCTCTCTCTGCGCCAACTCCAGGATCCCTTGTCCTACGTCACCCAGTTTCTCTCTTCACTCAACATCCGCGCCGCTATTTCCGATGTCATTGCTCCGAATATCGCGTTCTTCATCACCCAAATCTCCGGCGGAAACAGAGAGACGAACTTCCACATCGTCGCGGAGATCGATTTCATCCGACTGATCACCTGGATGGGAACAACTCCTGAATCGTACCACGAATGGACCAACGGCGGTCCGGTGGTGGAGGAGACGGTGGTTCTGGAAGAGGCTACGCCGGCGATGGAGAGACTGAGAATGGAGAAATTAGAAGAGAATGAGGAAGATGATGAATTTGGGGATTGCAGTATCTGTTTGGATGAAATGAATTGCAAGAAGAGAGAGGTGATAAAGATTCCCTGTGGGCATGTGTATCATCAATCATGCATCTTCACGTGGCTTAACACTAACAATTCTTGTCCTTTGTGTAGAAGGCCATTGCCATTGGAGAACTCACACTGA

Protein sequence

MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPTLLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHIVAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMERLRMEKLEENEEDDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLENSH

Homology

[Close]

BLAST of Tan0015065 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-10
Identity = 25/71 (35.21%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 162 AMERLRMEKLEENEEDDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSC 221
           A+E L +  + ++  + EF  C++C+D+   +  E  ++PC H+YH+ C+  WL  +NSC
Sbjct: 203 AIEALPLVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWLELHNSC 262

Query: 222 PLCRRPLPLEN 233
           P+CR  LP ++
Sbjct: 263 PVCRHELPTDD 272

[Close]

BLAST of Tan0015065 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.6e-09
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 162 AMERLRMEKLEENEEDDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSC 221
           A++ L   K+ ++    E   C++C+DE      +V ++PC HV+HQ C+  WL  +NSC
Sbjct: 195 AIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWLELHNSC 254

Query: 222 PLCRRPLPLEN 233
           P+CR  LP ++
Sbjct: 255 PVCRFELPTDD 264

[Close]

BLAST of Tan0015065 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 175 EEDDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLENS 234
           E+ D+   C +CL E   ++  V ++PC H++H  CI  WLN  NSCPLCR  LP +N+
Sbjct: 71  EQADKGVKCPVCLLEFE-EQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTDNA 128

[Close]

BLAST of Tan0015065 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 183 CSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLEN 233
           C +CL E   ++  VI++PC H++H +CI  WL+  NSCPLCR  LP ++
Sbjct: 88  CPVCLLEFE-EEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]

BLAST of Tan0015065 vs. ExPASy Swiss-Prot
Match: Q9CY62 (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-08
Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 183 CSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLEN 233
           C +CL E   ++  VI++PC H++H +CI  WL+  NSCPLCR  LP ++
Sbjct: 88  CPVCLLEFEAEE-TVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 136

[Close]

BLAST of Tan0015065 vs. NCBI nr
Match: KAG6603237.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-63
Identity = 136/233 (58.37%), Postives = 164/233 (70.39%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MSF  STPIQYRLY    TA++   +H+ LEVR+R   RLI  S   GVPPQ + ET PT
Sbjct: 1   MSFAASTPIQYRLY----TAAAQSETHKALEVRMRSFNRLISASSFTGVPPQILFETRPT 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
            + +ALFHLSLRQL DPL ++ + LS+L+I AA  +VI   IA  ITQ+S GNRET+FHI
Sbjct: 61  PVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAAACEVIGWKIASQITQLSAGNRETSFHI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMERLRMEKLE--ENEEDD 180
           V E+DFI+ I WMG     +    NGG +VEET+VL+E  PA  R R   +   E EE+ 
Sbjct: 121 VVEVDFIQNI-WMGQVAGMHQGQGNGGGLVEETLVLDE-LPARRRQRRGVVARVEVEEEK 180

Query: 181 EFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLE 232
           E GDC ICLDEM  KKREVI+ PCGHVYH+SCIF WLN +NSCPLC+RPLPLE
Sbjct: 181 ELGDCCICLDEMMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLE 227

[Close]

BLAST of Tan0015065 vs. NCBI nr
Match: KAG6603243.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.9 bits (642), Expect = 5.4e-63
Identity = 135/233 (57.94%), Postives = 163/233 (69.96%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MSF  STPIQYRLY    TA++   +H+ LEVR+R   RLI  S   GVPPQ + ET PT
Sbjct: 1   MSFAASTPIQYRLY----TAAAQSETHKALEVRMRSFNRLISASSFPGVPPQILFETRPT 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
            + +ALFHLSLRQL DPL ++ + LS+L+I AA  +VI   IA  I Q+S GNRET+FHI
Sbjct: 61  PVNDALFHLSLRQLHDPLFHIPRLLSTLHIHAAACEVIGWKIASQIAQLSAGNRETSFHI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMERLRMEKLE--ENEEDD 180
           V E+DFI+ I WMG     +    NGG +VEET+VL+E  PA  R R   +   E EE+ 
Sbjct: 121 VVEVDFIQNI-WMGQVAGMHQGQGNGGGLVEETLVLDE-LPARRRQRRGVVARVEVEEEK 180

Query: 181 EFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLE 232
           E GDC ICLDEM  KKREVI+ PCGHVYH+SCIF WLN +NSCPLC+RPLPLE
Sbjct: 181 ELGDCCICLDEMMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLE 227

[Close]

BLAST of Tan0015065 vs. NCBI nr
Match: XP_038883574.1 (E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida])

HSP 1 Score: 234.6 bits (597), Expect = 8.9e-58
Identity = 120/235 (51.06%), Postives = 160/235 (68.09%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MS   STPIQYRLYG     + +   + VLEV+  Y  R+I VSP  G PP+ +HET   
Sbjct: 1   MSSAASTPIQYRLYG-----TGSGTGNGVLEVQTSYFERMISVSPVTGRPPRILHETPRI 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
              NALF+LSL QLQ+PL Y++QFLSSLNI  A  +++A  IA +I ++   NRE+NF I
Sbjct: 61  PFHNALFYLSLHQLQNPLFYISQFLSSLNICPAACEIMARQIASYIDRMINENRESNFRI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATP---AMERLRMEKLEENEED 180
           +AE+DF R+I WM       H    G  + EETVV +EA P    +E++ +E++ E +  
Sbjct: 121 IAEVDFSRVI-WM-----EEHSIYGGDAMAEETVVFDEAPPPRRGVEKVAVERVRELKSQ 180

Query: 181 DEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLEN 233
           +E GDC ICL+E++C+KREVI+IPCGHVYH+SC+F WL  NNSCPLCR+PLPL +
Sbjct: 181 EELGDCCICLEELSCEKREVIRIPCGHVYHESCVFKWLRKNNSCPLCRKPLPLND 224

[Close]

BLAST of Tan0015065 vs. NCBI nr
Match: XP_016899530.1 (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa] >TYK29842.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 234.6 bits (597), Expect = 8.9e-58
Identity = 123/235 (52.34%), Postives = 159/235 (67.66%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MSF  S PIQYRLYG  T  +       +LEVR+ +  ++I +SP  G P Q +H+T   
Sbjct: 1   MSFAISNPIQYRLYGSGTGGNG------ILEVRISFFEQMISLSPVTGRPHQILHQTPRI 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
              NAL +L+LRQLQ PL Y+TQFLSSLNIR A S  +A  IA  I Q+   N + NFHI
Sbjct: 61  PYHNALVYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMER----LRMEKLEENEE 180
           +AE+DFIR+I W+    +S       G   EETVV +EA PA++R     R E+L+  E+
Sbjct: 121 IAEVDFIRVI-WLELEEQSM------GAGAEETVVFDEAPPALKRGVGKARGERLKSEEK 180

Query: 181 DDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLE 232
            ++ GDCSICLDE++C+KREVI+IPCGHVYH+SCIF WL  +NSCPLCR+PLPL+
Sbjct: 181 VEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPLK 222

[Close]

BLAST of Tan0015065 vs. NCBI nr
Match: XP_004144954.1 (uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical protein Csa_020356 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 3.4e-57
Identity = 124/232 (53.45%), Postives = 156/232 (67.24%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MSF  S PIQYRLY   T  +       VL+V + ++ ++I VSP  G P + +H+T   
Sbjct: 1   MSFAISNPIQYRLYASGTGGNG------VLQVNISFIQQIISVSPLTGRPHEVLHQTPRI 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
              NALF+LSLRQLQ PL Y+TQ LSSLNIR A S  +A  IA  I Q+   N ETNFHI
Sbjct: 61  PYHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMER----LRMEKLEENEE 180
           +AE+DFIRLI W+ +          GG   EETVVL+EA PA++R     R E+L   E+
Sbjct: 121 LAEVDFIRLI-WLPS-------MGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEK 180

Query: 181 DDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPL 229
            +E GDCSICLDE++C+KREV++IPCGHVYH+SCIF WL  +NSCPLCR+PL
Sbjct: 181 MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 218

[Close]

BLAST of Tan0015065 vs. ExPASy TrEMBL
Match: A0A5D3E1S5 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00800 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 4.3e-58
Identity = 123/235 (52.34%), Postives = 159/235 (67.66%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MSF  S PIQYRLYG  T  +       +LEVR+ +  ++I +SP  G P Q +H+T   
Sbjct: 1   MSFAISNPIQYRLYGSGTGGNG------ILEVRISFFEQMISLSPVTGRPHQILHQTPRI 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
              NAL +L+LRQLQ PL Y+TQFLSSLNIR A S  +A  IA  I Q+   N + NFHI
Sbjct: 61  PYHNALVYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMER----LRMEKLEENEE 180
           +AE+DFIR+I W+    +S       G   EETVV +EA PA++R     R E+L+  E+
Sbjct: 121 IAEVDFIRVI-WLELEEQSM------GAGAEETVVFDEAPPALKRGVGKARGERLKSEEK 180

Query: 181 DDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLE 232
            ++ GDCSICLDE++C+KREVI+IPCGHVYH+SCIF WL  +NSCPLCR+PLPL+
Sbjct: 181 VEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPLK 222

[Close]

BLAST of Tan0015065 vs. ExPASy TrEMBL
Match: A0A1S4DUZ4 (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 4.3e-58
Identity = 123/235 (52.34%), Postives = 159/235 (67.66%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MSF  S PIQYRLYG  T  +       +LEVR+ +  ++I +SP  G P Q +H+T   
Sbjct: 1   MSFAISNPIQYRLYGSGTGGNG------ILEVRISFFEQMISLSPVTGRPHQILHQTPRI 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
              NAL +L+LRQLQ PL Y+TQFLSSLNIR A S  +A  IA  I Q+   N + NFHI
Sbjct: 61  PYHNALVYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMER----LRMEKLEENEE 180
           +AE+DFIR+I W+    +S       G   EETVV +EA PA++R     R E+L+  E+
Sbjct: 121 IAEVDFIRVI-WLELEEQSM------GAGAEETVVFDEAPPALKRGVGKARGERLKSEEK 180

Query: 181 DDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLE 232
            ++ GDCSICLDE++C+KREVI+IPCGHVYH+SCIF WL  +NSCPLCR+PLPL+
Sbjct: 181 VEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPLK 222

[Close]

BLAST of Tan0015065 vs. ExPASy TrEMBL
Match: A0A0A0K696 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 124/232 (53.45%), Postives = 156/232 (67.24%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MSF  S PIQYRLY   T  +       VL+V + ++ ++I VSP  G P + +H+T   
Sbjct: 1   MSFAISNPIQYRLYASGTGGNG------VLQVNISFIQQIISVSPLTGRPHEVLHQTPRI 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
              NALF+LSLRQLQ PL Y+TQ LSSLNIR A S  +A  IA  I Q+   N ETNFHI
Sbjct: 61  PYHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMER----LRMEKLEENEE 180
           +AE+DFIRLI W+ +          GG   EETVVL+EA PA++R     R E+L   E+
Sbjct: 121 LAEVDFIRLI-WLPS-------MGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEK 180

Query: 181 DDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPL 229
            +E GDCSICLDE++C+KREV++IPCGHVYH+SCIF WL  +NSCPLCR+PL
Sbjct: 181 MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 218

[Close]

BLAST of Tan0015065 vs. ExPASy TrEMBL
Match: A0A0A0K2W2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 124/232 (53.45%), Postives = 156/232 (67.24%), Query Frame = 0


Query: 1   MSFTTSTPIQYRLYGGDTTASSAQRSHQVLEVRLRYLCRLIYVSPSAGVPPQTIHETAPT 60
           MSF  S PIQYRLY   T  +       VL+V + ++ ++I VSP  G P + +H+T   
Sbjct: 1   MSFAISNPIQYRLYASGTGGNG------VLQVNISFIQQIISVSPLTGRPHEVLHQTPRI 60

Query: 61  LLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAISDVIAPNIAFFITQISGGNRETNFHI 120
              NALF+LSLRQLQ PL Y+TQ LSSLNIR A S  +A  IA  I Q+   N ETNFHI
Sbjct: 61  PYHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHI 120

Query: 121 VAEIDFIRLITWMGTTPESYHEWTNGGPVVEETVVLEEATPAMER----LRMEKLEENEE 180
           +AE+DFIRLI W+ +          GG   EETVVL+EA PA++R     R E+L   E+
Sbjct: 121 LAEVDFIRLI-WLPS-------MGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEK 180

Query: 181 DDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPL 229
            +E GDCSICLDE++C+KREV++IPCGHVYH+SCIF WL  +NSCPLCR+PL
Sbjct: 181 MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 218

[Close]

BLAST of Tan0015065 vs. ExPASy TrEMBL
Match: A0A6J1EKL4 (E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111435522 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 2.4e-53
Identity = 117/200 (58.50%), Postives = 139/200 (69.50%), Query Frame = 0


Query: 34  LRYLCRLIYVSPSAGVPPQTIHETAPTLLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAA 93
           +R   RLI  S   GVPPQ + ET PT + +ALFHLSLRQL DPL ++ + LS+L+I AA
Sbjct: 1   MRSFNRLISASSFPGVPPQILFETRPTPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAA 60

Query: 94  ISDVIAPNIAFFITQISGGNRETNFHIVAEIDFIRLITWMGTTPESYHEWTNGGPVVEET 153
             +VI   IA  I Q+S GNRET+FHIV E+DFI+ I WMG          NGG +VEET
Sbjct: 61  ACEVIGWKIASQIAQLSAGNRETSFHIVVEVDFIQNI-WMGQVAGMRQGQGNGGGLVEET 120

Query: 154 VVLEEATPAMERLRMEKLE--ENEEDDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCI 213
           VVL+E  PA  R R   +   E EE+ E GDC ICLDEM  KKREVI+ PCGHVYH+SCI
Sbjct: 121 VVLDE-LPARRRQRRGVVARVEVEEEKELGDCCICLDEMMNKKREVIRTPCGHVYHESCI 180

Query: 214 FTWLNTNNSCPLCRRPLPLE 232
           F WLN +NSCPLC+RPLPLE
Sbjct: 181 FQWLNLHNSCPLCKRPLPLE 198

[Close]

BLAST of Tan0015065 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 27/73 (36.99%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 161 PAMERLRMEKLEENEEDDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNS 220
           P +  L   K+      ++   C++C++E      +  ++PC H+YH+ CI  WL  NNS
Sbjct: 202 PTINSLPSVKITPQHLTNDMSQCTVCMEEF-IVGGDATELPCKHIYHKDCIVPWLRLNNS 261

Query: 221 CPLCRRPLPLENS 234
           CP+CRR LPL N+
Sbjct: 262 CPICRRDLPLVNT 273

[Close]

BLAST of Tan0015065 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-11
Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 171 LEENEEDDEFG-DCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLP 230
           L E E DD+ G  C++C DEMN   +  +++PC H YH  CI  WL   N+CP+CR  LP
Sbjct: 296 LLEGENDDDGGLVCAVCKDEMNIGNK-AVQLPCNHKYHSECIVPWLKVRNTCPVCRYELP 355

Query: 231 LENS 234
            +++
Sbjct: 356 TDDA 358

[Close]

BLAST of Tan0015065 vs. TAIR 10
Match: AT5G37200.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 163 MERLRMEKLEENEEDDEFGDCSICLDEMNCKKREVIKIP-CGHVYHQSCIFTWLNTNNSC 222
           +E  R+E  +  EED+    CSIC+++ +    ++I++P C H++HQ C+F WL   NSC
Sbjct: 142 VEEQRVESADLEEEDE---TCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSC 201

Query: 223 PLCRR 227
           PLCR+
Sbjct: 202 PLCRK 203

[Close]

BLAST of Tan0015065 vs. TAIR 10
Match: AT1G18760.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-10
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 183 CSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSCPLCRRPLPLEN 233
           C+ICL+E N    +V+ +PCGH +   C+ TW  TN+ CPLCR  LP E+
Sbjct: 175 CTICLEEFN-DGTKVMTLPCGHEFDDECVLTWFETNHDCPLCRFKLPCED 223

[Close]

BLAST of Tan0015065 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-10
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 162 AMERLRMEKLEENEEDDEFGDCSICLDEMNCKKREVIKIPCGHVYHQSCIFTWLNTNNSC 221
           A++ L   K+ ++    E   C++C+DE      +V ++PC HV+HQ C+  WL  +NSC
Sbjct: 195 AIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWLELHNSC 254

Query: 222 PLCRRPLPLEN 233
           P+CR  LP ++
Sbjct: 255 PVCRFELPTDD 264

The following BLAST results are available for this feature:

BLAST of Tan0015065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	3.2e-10	35.21	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	4.6e-09	36.62	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q7ZW78	1.0e-08	44.07	E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2	[more]
Q6AXU4	1.8e-08	46.00	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]
Q9CY62	2.3e-08	46.00	E3 ubiquitin-protein ligase RNF181 OS=Mus musculus OX=10090 GN=Rnf181 PE=1 SV=1	[more]

BLAST of Tan0015065 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603237.1	1.1e-63	58.37	E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ...	[more]
KAG6603243.1	5.4e-63	57.94	E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ...	[more]
XP_038883574.1	8.9e-58	51.06	E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]	[more]
XP_016899530.1	8.9e-58	52.34	PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 ...	[more]
XP_004144954.1	3.4e-57	53.45	uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical ...	[more]

BLAST of Tan0015065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E1S5	4.3e-58	52.34	E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DUZ4	4.3e-58	52.34	E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ...	[more]
A0A0A0K696	1.6e-57	53.45	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 P...	[more]
A0A0A0K2W2	1.6e-57	53.45	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 P...	[more]
A0A6J1EKL4	2.4e-53	58.50	E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Tan0015065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60360.1	1.3e-11	36.99	RING/U-box superfamily protein	[more]
AT5G08139.1	3.9e-11	43.75	RING/U-box superfamily protein	[more]
AT5G37200.1	1.1e-10	41.54	RING/U-box superfamily protein	[more]
AT1G18760.1	3.3e-10	48.00	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT3G19950.1	3.3e-10	36.62	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 183..224 e-value: 9.6E-8 score: 41.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 182..225 e-value: 2.2E-13 score: 50.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 183..225 score: 13.448223
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 159..231 e-value: 7.1E-20 score: 72.0
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 5..226
None	No IPR available	PANTHER	PTHR22765:SF329	SUBFAMILY NOT NAMED	coord: 5..226
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 168..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015065.1	Tan0015065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044267	cellular protein metabolic process