Tan0015056 (gene) Snake gourd v1

Overview


Name	Tan0015056
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Dynein light chain
Location	LG08: 2001211 .. 2004389 (-)
RNA-Seq Expression	Tan0015056
Synteny	Tan0015056

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCCTAAACAAACAAATAAAAGGATTCAAATCCTTTTACAAGTCTCGCAATGTAGCTCATAATGTAGCATCGTGCGAGCCTGGTTCGGTGAGTTCGATGGATGAAGCGCCTGTTTATGCACCTGTACTACTTTATAAGTATAACTGGTTGGGTAGGAAAACTAAGAAAGCAACCGATCAACATGGCGGGCGGAGAGGAATGGAGGGCGGTGGCGGTGACGGTGACGGGGGCGGAGGCGGGGGAAGAAAGATGGTGGTTTTTGAGGGTAGGAAGTCAGTTTCTCATGTGGAAACAAATTTAGGATCAGTGGTTGCATTTCTTCAAGTGAAAGTATTGGTATCAGACATGCCTGAGATAATGCAAATTCAGGCTTTTAGATGTGCAAGGAGGAGTTATGACAGCTTGGAGAAGTTCAGCTCAAAACATATGGCTTATAATATTAAAAAGGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAATTATTTCTGCTCTTTAATTCCTCTTTGGCTTCATTGAAGTAAACAGAAGAGATTTTAGGAACAAATCATTAATGGGGTTTCACAAAGTGAGAAACTAATTTAGCCAAATTTTCCCTTTTCTTGCTTAAAGGATTATTTTTCCTTTTTCTTTTTTGGGCATTGGGAATTTCTTATTGATCTGGTTTTTTGAGGAAATTATCAAAAGAAAGGCAAAGCACAGGTCCCTTTATTTGTTGCTTTCTTCCTTCCTTTTTTTTTTGTCATATTCAGAAAAGAAAAATCAATGAAAAATGAAAATCATTGACTTCGTTTGATTACTATTTGAACGTTTTTAGTTTTTTATTTTTTATTTTTAAAAACTAAGTTTATAAATAATACTTTCACATGTGAGTTTTTTTGTTTTGTTATCTACTCTCTAAGAATATTTTCGAAATCGAAGTCAAACTTTGAAAACTAAATAAAAAAAGTAAATCTCATCTAATAACTATTTAGTTTTTTTTTTTCAATTTTTAAAAACTAAACTTATAAACATTATTTCCAACTATGCGCTTCTTTGTTGGGTTATATTTACTGTTTAACAAATGTTTTCAAAATTCAATCCAAGCTTTCGAAAACTAAAATAAAGTACTATTATTTTCTGAATTGACTCAGAATTCAAATTTTTCCATAGGTCTGTAACACGTAGTTTAAAAAACTTATTTTTATTTTTGAAATTTAACTAAGAATTCAAATCATCCGTTGGTAAAGAAATTGCTAAAAACAATCATAAATTTCCAAATTAAAAAATTAAAAACCAAAATCGTTAATGAAAACCCATCTGAATTCTCTAAACAAAGTCCACTCTCTGTTCCTGATGAGTGAGACAGTTGTTCAAACATTAAATCAGTACTACATTATATATTATCTTAAAATTTTGAGACACAATTCAAATGACCTATAATTTGGTCAAGGATCCGACAACCCCATGTGTTTTAGATCAGTAAACACATATTTTAAGCTAAACAATCTCATATTTCAATTAAATCTAGCCCTTCCTTTTTCTTTATAATAATCCATGTGATTACTTCATTATTGCTTAATTAGTGTTGTTAATTTAGAATTTCATTTATTACTAAATTAGTATCACTAACATTGGTTATATATGATATGAGAATTGAAAAGGGTTGTGAGATTGATAGAAGATTGCAAGAGATAATTTGGTTGTCTATGTGATTGTGAGATGGGTTGCAAAATAGAGTTCTATTTATTTAGGCTAAATTACAAGTTTAGCTCCAGAATTTTTTAAATTGTGTTTATTTAGTATTGGAATTTTAAAAAATATATAATAGATACTTAACTTTAAAAATGTATAATAGATCTCTGAACTTTCAATTTTGTGTCTAATAGGTTTTGACATCTTCAATGTTTTAAAAAGATTAACTGATTTATAGACATAAAATTAAAACTTATGCCAAATAGAACCTTAAACTTTTAATTTTGTGTCATGTAGGTTCATGATTTTTTCTTTTTAAAAAAATTAGATAGATCAAAGAACTTATTAGACAGAAAATAAAAAATTCAGTGATCTGTTGGACACAAATTGAAAGTTTAAGGTTTGTTTGGTATGCAATCCGAATTCTGTTTTATGTTTTCGGATTCATTTAATTCAATGAATATGTGTTTGGCATATGTGTTTTCGAAAACTATTTTCGGATTCTGTGATCCAAATAGTAGAAATTTTGAAAACAACATTTTTATGTTTTCACTGTATCCAGATTCTGAGTTTAAGATTTTAAAATGCATAATTATATCAAATAAAGATAAAAATCTTAATAAATACAATATTTCAGGTTATAAACTCAATTTACTTTCGTTAAATAAAAAATGTATAATATTATATATTACAAATTATATGATATTATATTATAAAATGATAATTCTTTAAAGTTTATAAAAATCATGTTCATAAATTCATTCTTAATGACTTATATTCAATCTAATATTTAGCGTTGTAACTACAACTAATTTCATGATTTATAAATATGTTATAAGACATACTTTAAACAACTATTGAAAACGAAATCAAATTTCTAAAGCTGCTACGAAACACAAATCTGAAAACATGAAACACAACTTTGTTTTCATTGAATCCATTGTTTTCAAATTTTTATTTTCAAACCTTAATAATCATTAGACCACCCTAAAAAATTTAGGGACTAAATTGGTAATTTAACCCCCTCCCAAAAAAGAAGAGGGTAATGATGTAATTTCACTCACAAAAAGCCCATTACTCTACCGGGTATGAAGAATGGATAAAAAGAAATATATGCTATTTCGTACTTTTAACTTTTAAGACCATTTTTGTCAAATGCCCCAAAATTATGACAAGACCCAAAAATGATCTGATAGAATAACTCTTGGAATAAAAACTTTGGTCATGTAAAAAAAAAAAAAGAAAGAGAAAAAGGAAAAAGGAAAAAGAATAAAAACTTTGGAAAACAGAAATTAATAAAAATTAGATGAATTTATACTAATTATAATTAGGGCCTAATGCAGGAGTTTGACAAAATGCATGGGCCGGCATGGCACTGTATTGTGGGCTCAAGTTTTGGGTCATTTGTGACCCATTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTATATATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTACTGAATGA

mRNA sequence

ATGGCCACCCTAAACAAACAAATAAAAGGATTCAAATCCTTTTACAAGTCTCGCAATGTAGCTCATAATGTAGCATCGTGCGAGCCTGGTTCGGTGAGTTCGATGGATGAAGCGCCTGTTTATGCACCTGTACTACTTTATAAGTATAACTGGTTGGGTAGGAAAACTAAGAAAGCAACCGATCAACATGGCGGGCGGAGAGGAATGGAGGGCGGTGGCGGTGACGGTGACGGGGGCGGAGGCGGGGGAAGAAAGATGGTGGTTTTTGAGGGTAGGAAGTCAGTTTCTCATGTGGAAACAAATTTAGGATCAGTGGTTGCATTTCTTCAAGTGAAAGTATTGGTATCAGACATGCCTGAGATAATGCAAATTCAGGCTTTTAGATGTGCAAGGAGGAGTTATGACAGCTTGGAGAAGTTCAGCTCAAAACATATGGCTTATAATATTAAAAAGGAGTTTGACAAAATGCATGGGCCGGCATGGCACTGTATTGTGGGCTCAAGTTTTGGGTCATTTGTGACCCATTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTATATATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTACTGAATGA

Coding sequence (CDS)

ATGGCCACCCTAAACAAACAAATAAAAGGATTCAAATCCTTTTACAAGTCTCGCAATGTAGCTCATAATGTAGCATCGTGCGAGCCTGGTTCGGTGAGTTCGATGGATGAAGCGCCTGTTTATGCACCTGTACTACTTTATAAGTATAACTGGTTGGGTAGGAAAACTAAGAAAGCAACCGATCAACATGGCGGGCGGAGAGGAATGGAGGGCGGTGGCGGTGACGGTGACGGGGGCGGAGGCGGGGGAAGAAAGATGGTGGTTTTTGAGGGTAGGAAGTCAGTTTCTCATGTGGAAACAAATTTAGGATCAGTGGTTGCATTTCTTCAAGTGAAAGTATTGGTATCAGACATGCCTGAGATAATGCAAATTCAGGCTTTTAGATGTGCAAGGAGGAGTTATGACAGCTTGGAGAAGTTCAGCTCAAAACATATGGCTTATAATATTAAAAAGGAGTTTGACAAAATGCATGGGCCGGCATGGCACTGTATTGTGGGCTCAAGTTTTGGGTCATTTGTGACCCATTCAACAGGTTGTTTCCTTTATTTTTCAATGGAGAAATTATATATTTTGTTGTTTAGAACTAAGATTCAGAAAGCTACTGAATGA

Protein sequence

MATLNKQIKGFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKATDQHGGRRGMEGGGGDGDGGGGGGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDMPEIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKIQKATE

Homology

[Close]

BLAST of Tan0015056 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 116 SDMPEIMQIQAFRCARRSYDSLEKFS-SKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVT 175
           +DMPE MQ  A  CA +   +LEKF+  K +A  IKKEFDK + P WHCIVG +FGS+VT
Sbjct: 11  ADMPEDMQQDAVDCATQ---ALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 176 HSTGCFLYFSMEKLYILLFRT 196
           H T  F+YF + ++ +LLF++
Sbjct: 71  HETKHFIYFYLGQVAVLLFKS 88

[Close]

BLAST of Tan0015056 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 111 VKVLVSDMPEIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFG 170
           + V  +DMP+ MQ  A  C  ++++  E    + +A  IKKEFDK + P WHCIVG SFG
Sbjct: 8   INVKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFG 67

Query: 171 SFVTHSTGCFLYFSMEKLYILLFR 195
           SFVTH T  F+YF++ K  +LLF+
Sbjct: 68  SFVTHETKNFIYFNINKHSVLLFK 89

[Close]

BLAST of Tan0015056 vs. ExPASy Swiss-Prot
Match: Q39580 (Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.2e-14
Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 116 SDMPEIMQIQAFRCARRSYDSLEKFS-SKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVT 175
           +DM E MQ  A  CA +   +LEK++  K +A  IKKEFD+ H P WHCIVG +FGS+VT
Sbjct: 13  ADMSEEMQADAVDCATQ---ALEKYNIEKDIAAYIKKEFDRKHNPTWHCIVGRNFGSYVT 72

Query: 176 HSTGCFLYFSMEKLYILLFRT 196
           H T  F+YF + ++ ILLF++
Sbjct: 73  HETKHFIYFYLGQVAILLFKS 90

[Close]

BLAST of Tan0015056 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-13
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 116 SDMPEIMQIQAFRCARRSYDSLEKFS-SKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVT 175
           +DM E MQ  +  CA +   +LEK++  K +A +IKKEFDK + P WHCIVG +FGS+VT
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 176 HSTGCFLYFSMEKLYILLFRT 196
           H T  F+YF + ++ ILLF++
Sbjct: 71  HETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Tan0015056 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-13
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 116 SDMPEIMQIQAFRCARRSYDSLEKFS-SKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVT 175
           +DM E MQ  +  CA +   +LEK++  K +A +IKKEFDK + P WHCIVG +FGS+VT
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVT 70

Query: 176 HSTGCFLYFSMEKLYILLFRT 196
           H T  F+YF + ++ ILLF++
Sbjct: 71  HETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Tan0015056 vs. NCBI nr
Match: XP_022143180.1 (uncharacterized protein LOC111013113 [Momordica charantia])

HSP 1 Score: 315.5 bits (807), Expect = 3.4e-82
Identity = 166/203 (81.77%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MATLNKQIKGFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKAT 60
           MATLNKQIKGFKSFYKSR+ A + A+ +P   + +D  PV      YKYNWLGRK+KKAT
Sbjct: 1   MATLNKQIKGFKSFYKSRDGARDTAAFDP---APLDRVPV------YKYNWLGRKSKKAT 60

Query: 61  DQHGGRRGMEGGGGDGDGGGG-GGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDMP 120
           DQHGGRRGMEGGGG GDGG G GGRK++V EGRKSVSHVETNL SV AFLQVKVLVSDMP
Sbjct: 61  DQHGGRRGMEGGGGGGDGGEGMGGRKLLVVEGRKSVSHVETNLASVAAFLQVKVLVSDMP 120

Query: 121 EIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGC 180
           E+MQ+QAFR ARRSYDSLEKFSSKHMA++IKKEFDK+HGPAWHCIVGSSFGSFVTHSTGC
Sbjct: 121 EMMQLQAFRSARRSYDSLEKFSSKHMAHSIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGC 180

Query: 181 FLYFSMEKLYILLFRTKIQKATE 203
           FLYFSMEKLYILLFRTKIQKATE
Sbjct: 181 FLYFSMEKLYILLFRTKIQKATE 194

[Close]

BLAST of Tan0015056 vs. NCBI nr
Match: XP_031736570.1 (uncharacterized protein LOC101208065 [Cucumis sativus] >KAE8651528.1 hypothetical protein Csa_019270 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 2.5e-77
Identity = 164/211 (77.73%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MATLNKQIKGFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKAT 60
           MATLNKQ+KGFKSFYKSR+   NV+S EP S+SS+D+  +      YKYNWLGRK+KKAT
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSVDKTSI------YKYNWLGRKSKKAT 60

Query: 61  DQHGGRRGMEGGGGDGDGGGG---------GGRKMVVFEGRKSVSHVETNLGSVVAFLQV 120
           +QHG      GGGG G GGGG         GGRK+VV EGRKSVSHVETNLGSV +FLQV
Sbjct: 61  EQHG------GGGGGGGGGGGVGGIREEIMGGRKVVV-EGRKSVSHVETNLGSVASFLQV 120

Query: 121 KVLVSDMPEIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGS 180
           KVLVSDMPEIMQIQAFR ARRSYDSLEKFSSKHMAYNIKKEFDK++GPAWHCIVGSSFGS
Sbjct: 121 KVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGS 180

Query: 181 FVTHSTGCFLYFSMEKLYILLFRTKIQKATE 203
           FVTHSTGCFLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 FVTHSTGCFLYFSMEKLYILLFRTKIQKAIE 198

[Close]

BLAST of Tan0015056 vs. NCBI nr
Match: XP_023538230.1 (uncharacterized protein LOC111799067 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.0 bits (759), Expect = 1.3e-76
Identity = 163/206 (79.13%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 1   MATLNKQIK-GFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKA 60
           MATLNKQ+K GFKSFYKSR+ A +V +CE  SV           V +YKYNWLGRK+KK 
Sbjct: 1   MATLNKQMKGGFKSFYKSRDGARDVQACESVSVDK---------VSVYKYNWLGRKSKKV 60

Query: 61  TDQHGGRRGMEGGGGDGDGGGGG---GRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVS 120
             QHGG RG + GGGDGDGGGGG   GRKMVV EGRKSVSHVETNLGSV +FLQVKVLVS
Sbjct: 61  VHQHGGSRGAK-GGGDGDGGGGGGTEGRKMVV-EGRKSVSHVETNLGSVASFLQVKVLVS 120

Query: 121 DMPEIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHS 180
           DMPE+MQIQAFRCARRSYDSLEK SSK MAYN+KKEFDK+HGPAWHCIVGSSFGSFVTHS
Sbjct: 121 DMPEMMQIQAFRCARRSYDSLEKLSSKLMAYNLKKEFDKVHGPAWHCIVGSSFGSFVTHS 180

Query: 181 TGCFLYFSMEKLYILLFRTKIQKATE 203
           TGCFLYFSME+LYILLFRTKIQKATE
Sbjct: 181 TGCFLYFSMEELYILLFRTKIQKATE 195

[Close]

BLAST of Tan0015056 vs. NCBI nr
Match: XP_038890919.1 (uncharacterized protein LOC120080348 [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 2.1e-76
Identity = 160/202 (79.21%), Postives = 167/202 (82.67%), Query Frame = 0


Query: 1   MATLNKQIKGFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKAT 60
           M TLNKQ+KGFKSFYKSR+   NV + EP S SSMD+  +      YKYNWLGRKTKKAT
Sbjct: 1   MTTLNKQMKGFKSFYKSRDGGRNVPTREPVSTSSMDKTSI------YKYNWLGRKTKKAT 60

Query: 61  DQHGGRRGMEGGGGDGDGGGGGGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDMPE 120
           DQH GR G E  GG          + VV EGRKSVSHVETNLGSV AFLQVKVLVSDMPE
Sbjct: 61  DQH-GRGGEEIMGG----------RKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPE 120

Query: 121 IMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGCF 180
           IMQIQAFR ARRSYDSLEKFSSKHMAYNIKKEFDK+HGPAWHCIVGSSFGSFVTHSTGCF
Sbjct: 121 IMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGCF 180

Query: 181 LYFSMEKLYILLFRTKIQKATE 203
           LYFSMEKLYILLFRTKIQKATE
Sbjct: 181 LYFSMEKLYILLFRTKIQKATE 185

[Close]

BLAST of Tan0015056 vs. NCBI nr
Match: XP_022965961.1 (uncharacterized protein LOC111465683 [Cucurbita maxima])

HSP 1 Score: 295.8 bits (756), Expect = 2.8e-76
Identity = 162/203 (79.80%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 1   MATLNKQIK-GFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKA 60
           M T+NKQ+K GFKSFYKSR+ A NV +CE  SV   D+A V      YKYNWLGRK+KKA
Sbjct: 1   MTTVNKQMKGGFKSFYKSRDGACNVQACESVSV---DKAYV------YKYNWLGRKSKKA 60

Query: 61  TDQHGGRRGMEGGGGDGDGGGGGGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDMP 120
             QHGG RG +GGGG  +GGG  GRKMVV EGRKSVSHVETNLGSV +FLQVKVLVSDMP
Sbjct: 61  VHQHGGPRGAKGGGGGDEGGGTEGRKMVV-EGRKSVSHVETNLGSVASFLQVKVLVSDMP 120

Query: 121 EIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGC 180
           E+MQIQAFRCARRSYDSLEKFSSK MAYN+KKEFDK+HGPAWHCIVGSSFGSFVTHSTGC
Sbjct: 121 EMMQIQAFRCARRSYDSLEKFSSKLMAYNLKKEFDKVHGPAWHCIVGSSFGSFVTHSTGC 180

Query: 181 FLYFSMEKLYILLFRTKIQKATE 203
           FLYFSME+LYILLFRTKIQKATE
Sbjct: 181 FLYFSMEELYILLFRTKIQKATE 193

[Close]

BLAST of Tan0015056 vs. ExPASy TrEMBL
Match: A0A6J1CN34 (uncharacterized protein LOC111013113 OS=Momordica charantia OX=3673 GN=LOC111013113 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 166/203 (81.77%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MATLNKQIKGFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKAT 60
           MATLNKQIKGFKSFYKSR+ A + A+ +P   + +D  PV      YKYNWLGRK+KKAT
Sbjct: 1   MATLNKQIKGFKSFYKSRDGARDTAAFDP---APLDRVPV------YKYNWLGRKSKKAT 60

Query: 61  DQHGGRRGMEGGGGDGDGGGG-GGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDMP 120
           DQHGGRRGMEGGGG GDGG G GGRK++V EGRKSVSHVETNL SV AFLQVKVLVSDMP
Sbjct: 61  DQHGGRRGMEGGGGGGDGGEGMGGRKLLVVEGRKSVSHVETNLASVAAFLQVKVLVSDMP 120

Query: 121 EIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGC 180
           E+MQ+QAFR ARRSYDSLEKFSSKHMA++IKKEFDK+HGPAWHCIVGSSFGSFVTHSTGC
Sbjct: 121 EMMQLQAFRSARRSYDSLEKFSSKHMAHSIKKEFDKVHGPAWHCIVGSSFGSFVTHSTGC 180

Query: 181 FLYFSMEKLYILLFRTKIQKATE 203
           FLYFSMEKLYILLFRTKIQKATE
Sbjct: 181 FLYFSMEKLYILLFRTKIQKATE 194

[Close]

BLAST of Tan0015056 vs. ExPASy TrEMBL
Match: A0A6J1HN27 (uncharacterized protein LOC111465683 OS=Cucurbita maxima OX=3661 GN=LOC111465683 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.4e-76
Identity = 162/203 (79.80%), Postives = 175/203 (86.21%), Query Frame = 0


Query: 1   MATLNKQIK-GFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKA 60
           M T+NKQ+K GFKSFYKSR+ A NV +CE  SV   D+A V      YKYNWLGRK+KKA
Sbjct: 1   MTTVNKQMKGGFKSFYKSRDGACNVQACESVSV---DKAYV------YKYNWLGRKSKKA 60

Query: 61  TDQHGGRRGMEGGGGDGDGGGGGGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDMP 120
             QHGG RG +GGGG  +GGG  GRKMVV EGRKSVSHVETNLGSV +FLQVKVLVSDMP
Sbjct: 61  VHQHGGPRGAKGGGGGDEGGGTEGRKMVV-EGRKSVSHVETNLGSVASFLQVKVLVSDMP 120

Query: 121 EIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGC 180
           E+MQIQAFRCARRSYDSLEKFSSK MAYN+KKEFDK+HGPAWHCIVGSSFGSFVTHSTGC
Sbjct: 121 EMMQIQAFRCARRSYDSLEKFSSKLMAYNLKKEFDKVHGPAWHCIVGSSFGSFVTHSTGC 180

Query: 181 FLYFSMEKLYILLFRTKIQKATE 203
           FLYFSME+LYILLFRTKIQKATE
Sbjct: 181 FLYFSMEELYILLFRTKIQKATE 193

[Close]

BLAST of Tan0015056 vs. ExPASy TrEMBL
Match: A0A0A0LKY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006120 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.8e-76
Identity = 163/206 (79.13%), Postives = 176/206 (85.44%), Query Frame = 0


Query: 1   MATLNKQIKGFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKAT 60
           MATLNKQ+KGFKSFYKSR+   NV+S EP S+SS+D+  +      YKYNWLGRK+KKAT
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSVDKTSI------YKYNWLGRKSKKAT 60

Query: 61  DQHGGRRGMEGGGGDGDGGGG----GGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVS 120
           +QHGG     GGGG G GG      GGRK+VV EGRKSVSHVETNLGSV +FLQVKVLVS
Sbjct: 61  EQHGG-----GGGGGGVGGIREEIMGGRKVVV-EGRKSVSHVETNLGSVASFLQVKVLVS 120

Query: 121 DMPEIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHS 180
           DMPEIMQIQAFR ARRSYDSLEKFSSKHMAYNIKKEFDK++GPAWHCIVGSSFGSFVTHS
Sbjct: 121 DMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHS 180

Query: 181 TGCFLYFSMEKLYILLFRTKIQKATE 203
           TGCFLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 TGCFLYFSMEKLYILLFRTKIQKAIE 194

[Close]

BLAST of Tan0015056 vs. ExPASy TrEMBL
Match: A0A6J1FJ58 (uncharacterized protein LOC111444374 OS=Cucurbita moschata OX=3662 GN=LOC111444374 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.8e-76
Identity = 164/204 (80.39%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MATLNKQIK-GFKSFYKSRNVAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKA 60
           MATLNKQ+K GFKSFYKSR+ A NV +CE  SV   D+A V      YKYNWLGRK+KK 
Sbjct: 10  MATLNKQMKGGFKSFYKSRDGACNVQACESVSV---DKASV------YKYNWLGRKSKKV 69

Query: 61  TDQHGGRRGMEGGGGDGDGGGG-GGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDM 120
             QHGG RG + GGGDGDG GG  GRKMVV EGRKSVSHVETNLGSV +FLQVKVLVSDM
Sbjct: 70  VHQHGGSRGAK-GGGDGDGSGGTEGRKMVV-EGRKSVSHVETNLGSVASFLQVKVLVSDM 129

Query: 121 PEIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTG 180
           PE+MQIQAFRCARRSYDSLEK SSK MAYN+KKEFDK+HGPAWHCIVGSSFGSFVTHSTG
Sbjct: 130 PEMMQIQAFRCARRSYDSLEKLSSKLMAYNLKKEFDKVHGPAWHCIVGSSFGSFVTHSTG 189

Query: 181 CFLYFSMEKLYILLFRTKIQKATE 203
           CFLYFSME+LYILLFRTKIQKATE
Sbjct: 190 CFLYFSMEELYILLFRTKIQKATE 202

[Close]

BLAST of Tan0015056 vs. ExPASy TrEMBL
Match: A0A1S3C671 (uncharacterized protein LOC103497357 OS=Cucumis melo OX=3656 GN=LOC103497357 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.3e-74
Identity = 158/203 (77.83%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 1   MATLNKQIKGFKSFYKSRN-VAHNVASCEPGSVSSMDEAPVYAPVLLYKYNWLGRKTKKA 60
           MATLNKQ+KGFKSFYKSR+    NV+S EP S SS+D+  +      YKYNWLGRK+KKA
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSI------YKYNWLGRKSKKA 60

Query: 61  TDQHGGRRGMEGGGGDGDGGGGGGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDMP 120
           TDQH G     GGG  G G    G + VV EGRKSVSHVETNLGSV +FLQVKVLVSDMP
Sbjct: 61  TDQHSG-----GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMP 120

Query: 121 EIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGC 180
           EIMQIQAFR ARRSYDSLEKFSSKHMAYNIKKEFDK++GPAWHCIVGSSFGSFVTHSTGC
Sbjct: 121 EIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKEFDKVYGPAWHCIVGSSFGSFVTHSTGC 180

Query: 181 FLYFSMEKLYILLFRTKIQKATE 203
           FLYFSMEKLYILLFRTKIQKA E
Sbjct: 181 FLYFSMEKLYILLFRTKIQKAIE 192

[Close]

BLAST of Tan0015056 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.0e-40
Identity = 82/126 (65.08%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 80  GGGGRKMVVFEGRKSVSHVE----TNLGSVVAFLQVKVLVSDMPEIMQIQAFRCARRSYD 139
           GGG  +    EGRKSVSHVE      + +    L V++L +DMP  MQ  AFRCAR + D
Sbjct: 86  GGGAAE----EGRKSVSHVERDTAARIEAAAEMLTVRILAADMPGFMQAHAFRCARMTLD 145

Query: 140 SLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRT 199
           SLEKFSSKHMA+N+KKEFDK +GPAWHCIVGSSFGSFVTHSTGCF+YFSM+KLY+LLF+T
Sbjct: 146 SLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHSTGCFIYFSMDKLYVLLFKT 205

Query: 200 KIQKAT 202
           K++ A+
Sbjct: 206 KVRPAS 207

[Close]

BLAST of Tan0015056 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-20
Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 111 VKVLVSDMPEIMQIQAFRCARRSYDSLE-KFSSKHMAYNIKKEFDKMHGPAWHCIVGSSF 170
           V+V  SDMP   Q +AF  +R   ++   K  +K +A+ +KK+FD  +GPAWHCIVG+SF
Sbjct: 36  VRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSF 95

Query: 171 GSFVTHSTGCFLYFSMEKLYILLFRTKIQ 199
           GS+VTHSTG FLYF ++K+Y+LLF+T ++
Sbjct: 96  GSYVTHSTGGFLYFQIDKVYVLLFKTAVE 124

[Close]

BLAST of Tan0015056 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 82.4 bits (202), Expect = 4.5e-16
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 109 LQVKVLV--SDMPEIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVG 168
           L+ K +V  SDMP  MQ+QA   A ++ D  + F  K +A +IKKEFD+ +G  W C+VG
Sbjct: 2   LEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVG 61

Query: 169 SSFGSFVTHSTGCFLYFSMEKLYILLFR 195
           S+FG F THS G F+YF +E L  L+F+
Sbjct: 62  SNFGCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]

BLAST of Tan0015056 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 110 QVKVLVSDMPEIMQIQAFRCARRSYDSLEKFSSKHMAYNIKKEFDKMHGPAWHCIVGSSF 169
           + KV  +DMP  MQ+QA + A +S D  + F S  +A +IKKEFD+ +G  W C+VG++F
Sbjct: 5   KAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNF 64

Query: 170 GSFVTHSTGCFLYFSMEKLYILLFR 195
           G F THS G F+YF +  L  L+F+
Sbjct: 65  GCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]

BLAST of Tan0015056 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 78.6 bits (192), Expect = 6.5e-15
Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 80  GGGGRKMVVFEGRKSVSHVETNLGSVVAFLQVKVLVSDMPEIMQIQAFRCARRSYDSLEK 139
           GG   + ++ + R S+  VE    S  A  +  +  +DM + MQ +A   A     + EK
Sbjct: 12  GGAPAQTILDDRRSSLPEVE---ASPPAGKRAVIKSADMKDDMQKEAIEIA---ISAFEK 71

Query: 140 FS-SKHMAYNIKKEFDKMHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRT 196
           +S  K +A NIKKEFDK HG  WHCIVG +FGS+VTH T  F+YF +++  +LLF++
Sbjct: 72  YSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 122

The following BLAST results are available for this feature:

BLAST of Tan0015056 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	2.4e-14	51.85	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q86A88	3.2e-14	47.62	Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=...	[more]
Q39580	9.2e-14	50.62	Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=30...	[more]
P61285	2.0e-13	49.38	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	2.0e-13	49.38	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]

BLAST of Tan0015056 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143180.1	3.4e-82	81.77	uncharacterized protein LOC111013113 [Momordica charantia]	[more]
XP_031736570.1	2.5e-77	77.73	uncharacterized protein LOC101208065 [Cucumis sativus] >KAE8651528.1 hypothetica...	[more]
XP_023538230.1	1.3e-76	79.13	uncharacterized protein LOC111799067 [Cucurbita pepo subsp. pepo]	[more]
XP_038890919.1	2.1e-76	79.21	uncharacterized protein LOC120080348 [Benincasa hispida]	[more]
XP_022965961.1	2.8e-76	79.80	uncharacterized protein LOC111465683 [Cucurbita maxima]	[more]

BLAST of Tan0015056 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN34	1.7e-82	81.77	uncharacterized protein LOC111013113 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1HN27	1.4e-76	79.80	uncharacterized protein LOC111465683 OS=Cucurbita maxima OX=3661 GN=LOC111465683...	[more]
A0A0A0LKY0	1.8e-76	79.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006120 PE=4 SV=1	[more]
A0A6J1FJ58	8.8e-76	80.39	uncharacterized protein LOC111444374 OS=Cucurbita moschata OX=3662 GN=LOC1114443...	[more]
A0A1S3C671	6.3e-74	77.83	uncharacterized protein LOC103497357 OS=Cucumis melo OX=3656 GN=LOC103497357 PE=...	[more]

BLAST of Tan0015056 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	2.0e-40	65.08	Dynein light chain type 1 family protein	[more]
AT1G23220.1	2.3e-20	51.69	Dynein light chain type 1 family protein	[more]
AT1G52240.2	4.5e-16	47.73	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	1.7e-15	45.88	Dynein light chain type 1 family protein	[more]
AT4G15930.1	6.5e-15	41.03	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 106..195 e-value: 9.4E-39 score: 144.7
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 111..195 e-value: 2.5E-30 score: 104.7
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 86..201
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 92..195 e-value: 1.4E-31 score: 110.4
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 108..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..83
None	No IPR available	PANTHER	PTHR11886:SF37	DYNEIN LIGHT CHAIN-LIKE PROTEIN	coord: 86..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015056.1	Tan0015056.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex