Tan0014820 (gene) Snake gourd v1

Overview


Name	Tan0014820
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	glutaredoxin
Location	LG11: 5660967 .. 5663274 (-)
RNA-Seq Expression	Tan0014820
Synteny	Tan0014820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCACAAGTCACTTCCATTTGCACTGATGTTTTCATTTTGAATTCGCGATTCTTTGTTCTGTCTCATTTCCTTCGGAGGTTGCATCGTTAGGGTTGCAGATCGAGCAGATTCAATCATGGCGTTGGACAAGGCCAAAGAGATTGTCACTACCAATCCCGTCGCCGTCTTCAGGTTCCTCTCTCGATCTTTGCGGTTCTCTTTTTATGAATCTATTTCTCGTGTTTGCCAATGGTTTTTTGCGGATTGCAAAATTGATGCTGTTGTTGTTCTATTTCAAATCACAGCAAGACCTCTTGTCCATACTGCGTTGAGGTGAAGAGACTGTTGACTAATCTGGGAGCCAGTTTTAAGGCTGTTGAATTGGATACTGAGAGTACGTAGTCTATATTTCTTCGTTTGAATTCTTTGCGCTCGATTATTCAATCTCATCTTGTATACATGCCTGCCATCTGTTTGGTTATCGATGAATCGTGCGCTCGTATATTCTGTGTTCTGCGTTCTGCTGCTTGCGGATTTAGGTTTAGTAATAATTTCATTGTTTTTTGTAGCTTCTTGAAATTAACGGAATCTTAATTGACTTTGCCTTATGCATTCTGTTTTCCTTTATTCGTTGCTGTACTTGGATTTACGCGCTATTTACGTCGATTCTTTGGGATTCGGATTTTTTAATATCACTAGTTCGTGGATGTTGTCTATGGAGAGATCTGTCTTTCGATGCATGTTCTTGCTCTAATGATTTAAGACAAGAAAAACTTTCAAAAGGAGAACTAAAAGCTTTTTTAACTATTCATTGTTGTCTCGAATCAACTGTTGGCAAATTTGGAATGCCTTTTCATGCTCCAAAGTGTGGATTCAGTTTGAAAGATGGATATTGAAAAGGAGTCTGGGGAAAGGGCAAGTAGGAATGTATGTTGAATGTTTGAAGACTCACAGAGCATTTGTTTGTAACCTTTCTATGTAAAGTAAAGTACTGTCTCGATTTTATTTTCCACTTCGTTGGCTGCAAACAGCGAATATTTGGTTAAATTCAACTGGGTCCATCCTAATCCTTTGGCATCTTTAAGTGTGACTTTTCTTTTATCGCAAGACTGGATTCTTAGTTCAACTGGGTCCATCCTAATCCTTTGGCATCTTGAAGTGTGATTTTTCTTTTATGGCAAGATTGGATTCTTGAATTGCATGCCCTTGAGTTTTCTACCCTTTCAGCACTGAGCAGGATGAGCACAATTCCGAGATGATCATTAATTTTATATGCTTTTTTTTGGTCCAACAATGGAGGATTCGACTCATGACCTCATGATTATAAATCATAAATCATAGTTCTAGTGGCATCAATTTTATATTCTTTCAAAGCTTTCTAAATCAATTTTATGTGCAATTTGACTGTTGATTAATTGGATTAAATTGATTCTAAAGGTGATGGAAGAGACGTACAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTGCCCAATGTGTTCATAGGTGGGAAGCACATTGGTGGCTGTGATGGTAAATATTTACTACCCTCTCAACTTAAATGACGATTATTACATGCTTTTGCCTCATTTCTTCTCTGTTTCCATGTCTGAGAGTATTACATGTTAATGTTAATATATACACATGCATACCTAATGCATTCGTAAGCTTTTGAGTTTAGTAATAATTTAATTTAACCTAGTATCGAAATAGAAGTCTTAAATTTGAAACTCCTACCATATCATTTCTTTTTTAATTGTTGATATCCATTCACGTGTTAGATTTTGTAAATCAAATTACTATCAAACCCACATGTAAGAACTTGGGAGAGAAATTAAGGATAAGCTTAATAAATAAAAATCCCTTGATGTCTCATGAGTTTGGGCTTTGGCGCAGGCGCAGGTGCGTGTGCCTTGGGTATAGGGGAACAAAGCTCCGGCCCTGATTATCCCGAATATATATAACAGATTAAATACACCCTAATTTATCAGCCTGAGATTCTAGATTTGGTAGTGAATTAACAATAAATATTTTATTTTCTAGTTTCTCATTAAGATTTTCTTTTTGTTGCTTCGCAGCAACAGTAGCACTTCATGGTAAAAAGGGTCTGGTTCCTCTCCTGACTGAAGCGGGAGCAATTGCCAAAGTTTCTGCTTAGAGAAGAAGTCTAAATCATGTTATTGCATAGGGAAATTACATAAATAAACGTGGCATTTCTACAAAAGAAAATGCTTTCACTGTGGAACTCTAGTTGTTTCTAGAAATTACTGTAAGGAACTTGTGCTTCCTTTGCATCTATAATATATGCCCCAGGTTTCCTATA

mRNA sequence

CTTTCACAAGTCACTTCCATTTGCACTGATGTTTTCATTTTGAATTCGCGATTCTTTGTTCTGTCTCATTTCCTTCGGAGGTTGCATCGTTAGGGTTGCAGATCGAGCAGATTCAATCATGGCGTTGGACAAGGCCAAAGAGATTGTCACTACCAATCCCGTCGCCGTCTTCAGCAAGACCTCTTGTCCATACTGCGTTGAGGTGAAGAGACTGTTGACTAATCTGGGAGCCAGTTTTAAGGCTGTTGAATTGGATACTGAGAGTGATGGAAGAGACGTACAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTGCCCAATGTGTTCATAGGTGGGAAGCACATTGGTGGCTGTGATGCAACAGTAGCACTTCATGGTAAAAAGGGTCTGGTTCCTCTCCTGACTGAAGCGGGAGCAATTGCCAAAGTTTCTGCTTAGAGAAGAAGTCTAAATCATGTTATTGCATAGGGAAATTACATAAATAAACGTGGCATTTCTACAAAAGAAAATGCTTTCACTGTGGAACTCTAGTTGTTTCTAGAAATTACTGTAAGGAACTTGTGCTTCCTTTGCATCTATAATATATGCCCCAGGTTTCCTATA

Coding sequence (CDS)

ATGGCGTTGGACAAGGCCAAAGAGATTGTCACTACCAATCCCGTCGCCGTCTTCAGCAAGACCTCTTGTCCATACTGCGTTGAGGTGAAGAGACTGTTGACTAATCTGGGAGCCAGTTTTAAGGCTGTTGAATTGGATACTGAGAGTGATGGAAGAGACGTACAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTGCCCAATGTGTTCATAGGTGGGAAGCACATTGGTGGCTGTGATGCAACAGTAGCACTTCATGGTAAAAAGGGTCTGGTTCCTCTCCTGACTGAAGCGGGAGCAATTGCCAAAGTTTCTGCTTAG

Protein sequence

MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQWTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA

Homology

[Close]

BLAST of Tan0014820 vs. ExPASy Swiss-Prot
Match: Q9ZR41 (Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.0e-40
Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           M+L KAKEIV+ NPVAVFSKT CP+CV VK LL+ LGA+FKAVELD+E DG ++QAALA+
Sbjct: 1   MSLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVS 107
           WTGQRTVPNVFIG KHIGGCDAT ALH +  L+PLLTEAGAIAK S
Sbjct: 61  WTGQRTVPNVFIGRKHIGGCDATTALHREGKLLPLLTEAGAIAKTS 106

[Close]

BLAST of Tan0014820 vs. ExPASy Swiss-Prot
Match: Q9FNE2 (Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-37
Identity = 78/107 (72.90%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MA+ KAKEIV +  V VFSKT CPYCV VK LL  LGA FKAVELDTESDG  +Q+ LA+
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGG HIGGCDAT  LH    LVPLLTEAGAIA  +A
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Tan0014820 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.1e-37
Identity = 72/102 (70.59%), Postives = 84/102 (82.35%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MA+ K KE+V++N V VFSKT CPYC  VK+LL  LGA +K VELDTESDG ++Q ALA+
Sbjct: 1   MAMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAI 103
           WTGQRTVPNVFIGGKHIGGCD+T A H +  LVPLLTEAGA+
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEAGAV 102

[Close]

BLAST of Tan0014820 vs. ExPASy Swiss-Prot
Match: Q6K953 (Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC4 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.1e-37
Identity = 77/106 (72.64%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MALDKAKEIV ++PV VFSKT CP+C  VKRLL  L AS+KAVELD ESDG ++Q+ALA 
Sbjct: 27  MALDKAKEIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALAD 86

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVS 107
           WTGQRTVP VFI GKHIGGCD T+A+H    LVPLLTEAGAIA  S
Sbjct: 87  WTGQRTVPCVFIKGKHIGGCDDTMAMHKGGNLVPLLTEAGAIATPS 132

[Close]

BLAST of Tan0014820 vs. ExPASy Swiss-Prot
Match: O81187 (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-36
Identity = 70/102 (68.63%), Postives = 84/102 (82.35%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MA+ KA+E+V++N V VFSKT CPYC  VK+LL  LGA FK +ELD+ESDG D+Q ALA+
Sbjct: 1   MAMIKAQELVSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAI 103
           WTGQRTVPNVFIGGKHIGGCD T  +H +  L+PLLTEAGA+
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGAV 102

[Close]

BLAST of Tan0014820 vs. NCBI nr
Match: XP_022993774.1 (glutaredoxin isoform X1 [Cucurbita maxima] >XP_023551689.1 glutaredoxin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.0 bits (476), Expect = 4.3e-44
Identity = 92/107 (85.98%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAK+IV +NPVAVFSKTSCPYCV+VKRLLT LGA+FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVASNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ K GLVPLL EAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Tan0014820 vs. NCBI nr
Match: KAG7016200.1 (hypothetical protein SDJN02_21305 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187.2 bits (474), Expect = 7.4e-44
Identity = 92/107 (85.98%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAK+IV +NPVAVFSKTSCPYCV+VKRLLT LGA+FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ K GLVPLL EAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Tan0014820 vs. NCBI nr
Match: KAG6578661.1 (Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 7.4e-44
Identity = 92/107 (85.98%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAK+IV +NPVAVFSKTSCPYCV+VKRLLT LGA+FKAVELDTESDG ++QAALAQ
Sbjct: 315 MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 374

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ K GLVPLL EAGA AKVSA
Sbjct: 375 WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 421

[Close]

BLAST of Tan0014820 vs. NCBI nr
Match: XP_022938379.1 (glutaredoxin [Cucurbita moschata])

HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43
Identity = 91/107 (85.05%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAK+IV +NPVAVFSKTSCPYCV+VKRLLT LG +FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGVNFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ K GLVPLL EAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Tan0014820 vs. NCBI nr
Match: XP_022134425.1 (glutaredoxin [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 88/107 (82.24%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAKEIV++NPVAVFSK+ CP+CV+VK+LLT +GASFKAVELD ESDG ++QAALAQ
Sbjct: 1   MALEKAKEIVSSNPVAVFSKSYCPFCVDVKKLLTEVGASFKAVELDRESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVALH K GLVP+L EAGA+AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALHKKGGLVPMLAEAGAVAKVSA 107

[Close]

BLAST of Tan0014820 vs. ExPASy TrEMBL
Match: A0A6J1K114 (glutaredoxin isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489683 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-44
Identity = 92/107 (85.98%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAK+IV +NPVAVFSKTSCPYCV+VKRLLT LGA+FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVASNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ K GLVPLL EAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Tan0014820 vs. ExPASy TrEMBL
Match: A0A6J1FDX0 (glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444645 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.0e-43
Identity = 91/107 (85.05%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAK+IV +NPVAVFSKTSCPYCV+VKRLLT LG +FKAVELDTESDG ++QAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGVNFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ K GLVPLL EAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Tan0014820 vs. ExPASy TrEMBL
Match: A0A6J1BY96 (glutaredoxin OS=Momordica charantia OX=3673 GN=LOC111006676 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43
Identity = 88/107 (82.24%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAKEIV++NPVAVFSK+ CP+CV+VK+LLT +GASFKAVELD ESDG ++QAALAQ
Sbjct: 1   MALEKAKEIVSSNPVAVFSKSYCPFCVDVKKLLTEVGASFKAVELDRESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVALH K GLVP+L EAGA+AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALHKKGGLVPMLAEAGAVAKVSA 107

[Close]

BLAST of Tan0014820 vs. ExPASy TrEMBL
Match: A0A0A0KR45 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G523190 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.1e-40
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAKEIV +NPVAVFSK+ CP+CV+VKRLLT LG SFKA+ELDTESDGR++QAALAQ
Sbjct: 1   MALEKAKEIVASNPVAVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           +TGQRTVPNVFIGGKHIGGCD T+AL+    LVPLL EAGAIAKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Tan0014820 vs. ExPASy TrEMBL
Match: A0A5A7T277 (Glutaredoxin-C6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G001730 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.2e-40
Identity = 85/107 (79.44%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MAL+KAKEIV +NPV VFSK+ CP+CV+VKRLLT LG SFKA+ELDTESDGR+VQAALAQ
Sbjct: 1   MALEKAKEIVASNPVTVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREVQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           +TGQRTVPNVFIGGKHIGGCD T+AL+    LVPLL EAGAIAKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Tan0014820 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-38
Identity = 78/107 (72.90%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           MA+ KAKEIV +  V VFSKT CPYCV VK LL  LGA FKAVELDTESDG  +Q+ LA+
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQRTVPNVFIGG HIGGCDAT  LH    LVPLLTEAGAIA  +A
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Tan0014820 vs. TAIR 10
Match: AT5G40370.2 (Glutaredoxin family protein )

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-32
Identity = 67/91 (73.63%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 17  VFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQWTGQRTVPNVFIGGKH 76
           + SKT CPYCV VK LL  LGA FKAVELDTESDG  +Q+ LA+WTGQRTVPNVFIGG H
Sbjct: 42  ICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNH 101

Query: 77  IGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           IGGCDAT  LH    LVPLLTEAGAIA  +A
Sbjct: 102 IGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 132

[Close]

BLAST of Tan0014820 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 6.9e-32
Identity = 66/107 (61.68%), Postives = 82/107 (76.64%), Query Frame = 0


Query: 1   MALDKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELDTESDGRDVQAALAQ 60
           + ++KAKEIV+  PV VFSKT C YC  VK+LLT LGA+FK +ELD  SDG ++Q+AL++
Sbjct: 17  VVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSE 76

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEAGAIAKVSA 108
           WTGQ TVPNVFI G HIGGCD  +  + +  LVPLLTEAGAIA  S+
Sbjct: 77  WTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIADNSS 123

[Close]

BLAST of Tan0014820 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 2.6e-18
Identity = 49/97 (50.52%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 4   DKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELD-TESDGRDVQAALAQWT 63
           +  K  V  NPV V+SKT C Y  +VK L  +L      VELD   S+G  +Q  L + T
Sbjct: 76  ETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLGSEGSQLQNVLEKIT 135

Query: 64  GQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEA 100
           GQ TVPNVFIGGKHIGGC  T+ LH K  L  +L EA
Sbjct: 136 GQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEA 172

[Close]

BLAST of Tan0014820 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 87.0 bits (214), Expect = 9.7e-18
Identity = 47/97 (48.45%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 4   DKAKEIVTTNPVAVFSKTSCPYCVEVKRLLTNLGASFKAVELD-TESDGRDVQAALAQWT 63
           +  ++ VT N V ++SKT C YC EVK L   LG     VELD     G  +Q  L + T
Sbjct: 71  ESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLT 130

Query: 64  GQRTVPNVFIGGKHIGGCDATVALHGKKGLVPLLTEA 100
           GQ TVPNVF+ GKHIGGC  TV L+ K  L  +L EA
Sbjct: 131 GQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEA 167

The following BLAST results are available for this feature:

BLAST of Tan0014820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR41	4.0e-40	76.42	Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
Q9FNE2	2.4e-37	72.90	Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1	[more]
P55143	3.1e-37	70.59	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
Q6K953	4.1e-37	72.64	Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC4...	[more]
O81187	3.5e-36	68.63	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]

BLAST of Tan0014820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993774.1	4.3e-44	85.98	glutaredoxin isoform X1 [Cucurbita maxima] >XP_023551689.1 glutaredoxin [Cucurbi...	[more]
KAG7016200.1	7.4e-44	85.98	hypothetical protein SDJN02_21305 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578661.1	7.4e-44	85.98	Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita...	[more]
XP_022938379.1	2.2e-43	85.05	glutaredoxin [Cucurbita moschata]	[more]
XP_022134425.1	1.1e-42	82.24	glutaredoxin [Momordica charantia]	[more]

BLAST of Tan0014820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K114	2.1e-44	85.98	glutaredoxin isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489683 PE=3 SV=1	[more]
A0A6J1FDX0	1.0e-43	85.05	glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444645 PE=3 SV=1	[more]
A0A6J1BY96	5.2e-43	82.24	glutaredoxin OS=Momordica charantia OX=3673 GN=LOC111006676 PE=3 SV=1	[more]
A0A0A0KR45	4.1e-40	79.44	Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G523190 PE=3 SV=1	[more]
A0A5A7T277	9.2e-40	79.44	Glutaredoxin-C6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G0017...	[more]

BLAST of Tan0014820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40370.1	1.7e-38	72.90	Glutaredoxin family protein	[more]
AT5G40370.2	1.1e-32	73.63	Glutaredoxin family protein	[more]
AT5G63030.1	6.9e-32	61.68	Thioredoxin superfamily protein	[more]
AT2G20270.1	2.6e-18	50.52	Thioredoxin superfamily protein	[more]
AT4G28730.1	9.7e-18	48.45	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 74..87 score: 47.62 coord: 60..73 score: 63.1 coord: 15..33 score: 49.12
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 15..77 e-value: 1.1E-20 score: 73.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..107 e-value: 7.9E-39 score: 133.8
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 1..106
None	No IPR available	PANTHER	PTHR45694:SF14	GLUTAREDOXIN-C2	coord: 1..106
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 3..103 score: 25.575853
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 14..95 e-value: 2.62377E-45 score: 139.212
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 15..92 e-value: 1.1E-27 score: 94.0
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 17..33
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014820.1	Tan0014820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity