Tan0014399 (gene) Snake gourd v1

Overview


Name	Tan0014399
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	transcription factor bHLH162-like
Location	LG05: 5484665 .. 5486335 (-)
RNA-Seq Expression	Tan0014399
Synteny	Tan0014399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATTATTCCATGAAGGGTACTCGTGAAGATACGAATCAACGAAATGTTAATACTAATATCAAGGTTGAAAGAAAGGTCATGGAGAAGAATCGAAGAAACCAGATGAAATTGCTCTACTCCAAACTCAATTCTCTCCTCCCAACTCATCACTCCAACGTAATTTTTTTTTTTTCAATCCTTTTCGTATTTGGTTAACGTTTTTAAATTTTGCTCTTAATTGGGTCTCCACTAAAACTTGCAAATTTTAAAATTGGAGGTTAATTTTTTTTTTTTTTTTTTTTTGGGTAGGAATCGCCACCGACAGTTTCGGATCAGATAGAGGAAGCTACAAAATACATAAAATCACTTGAGTCAAAGCTGAAGAAGGATGGGGAGAAGAAGGAGAGCTTTTTGAGGAGATCATCGTCGTCGGCGTCGACGAGTTGCCGGAATCATAATAATAATTCACCTGAATTGAAAATCAAAGAGATGGGTTCAGCCGTGGAGGTTGTTTTAACAACTGGGTTAGAGGATCAGTTTGTATTCTACAAGATTATTCGAATCTTCCATGAAGAGCGAGTCAAGATCATCAATGCCAGTTATTCCGTTCTTGGGAACGTCGCATTTTATTCACTCCATGCTGAGGTATATATGTAGTCTATTAGCTCGTTTGATAACCGTTTAGATCTGTTTGATAACTAATTTTTTATTTTTTAAAATTTAGCCTAAAAATAGGATTTCTACCGATGATTTTCTATATTTTCTTATATATTTTGTAGTTACGTTTTTCAAAAAATCAAATTAAATTTTGGGAACTAAAAAAGGTAGTTTTAAAAAACTTAATTTTATTTTTAGAATTTGGCTAATAATTCAAGTACTCCCTGAATGGAGATAAACCCTATTGTAGAGAAATTAAGAGAAAACAAACTTAATTTTTCAAAAACCAAAAATTAAGATCAAAATGGTTATCAAACGGGATCTTAATTTATGTATTTTGGTGTTTGAAAATTAAGCCTAAAAATACTACTTCTACCAATAAATTTCTATATTTCCTTATCTCATTTGTAACTATGTTTTCAAAAACCAAACTAAATTTTGAAAATTAAAAAAAAAAATAGTTTCCAAAAATTAGTTTTTGTTTTTTAAATTTAGCTAGAAACATAAATAGTACCTCGATAAGCAGAGAAGATAAAGAGAAATTGGGTAAAAACAAGCTTAATTTTTAAAAACCAATAACAAAAAAGTTATCAAACGGAGATTTAGTTTAAACTTTTGAATTCGAGAGTGGTTTAGTGTATATATATTGTTATTGTAAATGGTTTTTGGGTTTTGGTTATGGAGTAGATTGAAGACGTGGTGTATGAATTTGGAGCGACGAAACTAACGGAGAGGCTAAAAAGATTAGTTTACGAATCGAAGAGTGAAGCAAAAATGCAGGCTGCAGCAGCTTCTTCGAGCGATCATGGCGCCGGCACTCATGCGGCGGCGGCGTATACTCCGACGACGAGTTCCGATGTCCATTTTTGGAGCCACTAGATTTGAAGACAAATGGGACTGAAATTTCTGTTGCTATCATAGCTTGAGAAAATTTCAAGAGTTTGTTAGAGATATGGAAATGTGGCTTATGCTTGTATGTGTTGAAAGTTTGTTTGTTTGTAATTTTTTTAAGATTTAAGATGTCTTTGTGTTAG

mRNA sequence

TGATTATTCCATGAAGGGTACTCGTGAAGATACGAATCAACGAAATGTTAATACTAATATCAAGGTTGAAAGAAAGGTCATGGAGAAGAATCGAAGAAACCAGATGAAATTGCTCTACTCCAAACTCAATTCTCTCCTCCCAACTCATCACTCCAACGAATCGCCACCGACAGTTTCGGATCAGATAGAGGAAGCTACAAAATACATAAAATCACTTGAGTCAAAGCTGAAGAAGGATGGGGAGAAGAAGGAGAGCTTTTTGAGGAGATCATCGTCGTCGGCGTCGACGAGTTGCCGGAATCATAATAATAATTCACCTGAATTGAAAATCAAAGAGATGGGTTCAGCCGTGGAGGTTGTTTTAACAACTGGGTTAGAGGATCAGTTTGTATTCTACAAGATTATTCGAATCTTCCATGAAGAGCGAGTCAAGATCATCAATGCCAGTTATTCCGTTCTTGGGAACGTCGCATTTTATTCACTCCATGCTGAGATTGAAGACGTGGTGTATGAATTTGGAGCGACGAAACTAACGGAGAGGCTAAAAAGATTAGTTTACGAATCGAAGAGTGAAGCAAAAATGCAGGCTGCAGCAGCTTCTTCGAGCGATCATGGCGCCGGCACTCATGCGGCGGCGGCGTATACTCCGACGACGAGTTCCGATGTCCATTTTTGGAGCCACTAGATTTGAAGACAAATGGGACTGAAATTTCTGTTGCTATCATAGCTTGAGAAAATTTCAAGAGTTTGTTAGAGATATGGAAATGTGGCTTATGCTTGTATGTGTTGAAAGTTTGTTTGTTTGTAATTTTTTTAAGATTTAAGATGTCTTTGTGTTAG

Coding sequence (CDS)

ATGAAGGGTACTCGTGAAGATACGAATCAACGAAATGTTAATACTAATATCAAGGTTGAAAGAAAGGTCATGGAGAAGAATCGAAGAAACCAGATGAAATTGCTCTACTCCAAACTCAATTCTCTCCTCCCAACTCATCACTCCAACGAATCGCCACCGACAGTTTCGGATCAGATAGAGGAAGCTACAAAATACATAAAATCACTTGAGTCAAAGCTGAAGAAGGATGGGGAGAAGAAGGAGAGCTTTTTGAGGAGATCATCGTCGTCGGCGTCGACGAGTTGCCGGAATCATAATAATAATTCACCTGAATTGAAAATCAAAGAGATGGGTTCAGCCGTGGAGGTTGTTTTAACAACTGGGTTAGAGGATCAGTTTGTATTCTACAAGATTATTCGAATCTTCCATGAAGAGCGAGTCAAGATCATCAATGCCAGTTATTCCGTTCTTGGGAACGTCGCATTTTATTCACTCCATGCTGAGATTGAAGACGTGGTGTATGAATTTGGAGCGACGAAACTAACGGAGAGGCTAAAAAGATTAGTTTACGAATCGAAGAGTGAAGCAAAAATGCAGGCTGCAGCAGCTTCTTCGAGCGATCATGGCGCCGGCACTCATGCGGCGGCGGCGTATACTCCGACGACGAGTTCCGATGTCCATTTTTGGAGCCACTAG

Protein sequence

MKGTREDTNQRNVNTNIKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDGEKKESFLRRSSSSASTSCRNHNNNSPELKIKEMGSAVEVVLTTGLEDQFVFYKIIRIFHEERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRLVYESKSEAKMQAAAASSSDHGAGTHAAAAYTPTTSSDVHFWSH

Homology

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BLAST of Tan0014399 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-21
Identity = 71/188 (37.77%), Postives = 119/188 (63.30%), Query Frame = 0


Query: 7   DTNQRNVNTNIKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYI 66
           + +  N   +  V+RK +EKNRR QMK LYS+L SLLP HHS+  P T+ DQ++EA  YI
Sbjct: 2   EPSHSNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLP-HHSSTEPLTLPDQLDEAANYI 61

Query: 67  KSLESKLKKDGEKKESF-----LRRSSSSASTSCRNHNNNS-----PELKIKEMGSAVEV 126
           K L+  ++K  E+K +      L + +S  S+S  +  + S     P+++I+E GS   +
Sbjct: 62  KKLQVNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHI 121

Query: 127 VLTTGLEDQFVFYKIIRIFHEE-RVKIINASYSVLGNVAFYSLHAEIEDVVYEFGA-TKL 183
            L T LE +F+F +IIR+  EE   +I +A YS++ +  F++LH ++E+  +++GA +++
Sbjct: 122 FLVTSLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEE--HDYGARSQI 181

[Close]

BLAST of Tan0014399 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 45/172 (26.16%), Postives = 84/172 (48.84%), Query Frame = 0


Query: 18  KVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDG 77
           K+  +  E+ RR +M  LY+ L SLLP H       T SDQ+ EA  YIK L+ K+K+  
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRST-SDQVNEAVNYIKYLQRKIKELS 62

Query: 78  EKKESFLRRSSSSASTSCRNHNNNSPEL-------KIKEMGSAVEVVLTTG-LEDQFVFY 137
            +++  +  S  S   S         E+        +++    VE++L++     Q  F 
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFS 122

Query: 138 KIIRIFHEERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRL 182
            ++++  E  + ++N+  S++ +   Y++ AE+ D+       +L +RL R+
Sbjct: 123 SVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of Tan0014399 vs. NCBI nr
Match: XP_038902351.1 (transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 234.6 bits (597), Expect = 8.5e-58
Identity = 144/221 (65.16%), Postives = 167/221 (75.57%), Query Frame = 0


Query: 9   NQRNVNTNIKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKS 68
           N+   + N KVERKVMEKNRRN+MK LY+ LNSLLP  HSNE P TV DQI++A KYIKS
Sbjct: 4   NRELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKYIKS 63

Query: 69  LESKLKKDGEKKESFLRRSSSSASTS-----CRNHNNNSPELKIKEMGSAVEVVLTTGLE 128
           LE  LKKD EKKE  LR+S  S+S+S       + N N PELKIKEMGSAVEVVLTTGLE
Sbjct: 64  LEINLKKDEEKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTTGLE 123

Query: 129 DQFVFYKIIRIFHEERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRLVY 188
           D+ +FY+IIRIF EERV+IIN SYS+L N   YSLH EIEDVVYEFG TKL ERLK+LV+
Sbjct: 124 DRSIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKKLVH 183

Query: 189 ESKSEAKMQAAAASSSDHGAGTHAAAAYTPTTSSDVHFWSH 225
           E  ++ ++QA A SSS HG GT+  A   PT SSD +FWSH
Sbjct: 184 EPNNDPEIQAVAVSSS-HG-GTNFPAD-VPTMSSDYNFWSH 221

[Close]

BLAST of Tan0014399 vs. NCBI nr
Match: KAG6604789.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.8 bits (582), Expect = 4.7e-56
Identity = 147/225 (65.33%), Postives = 167/225 (74.22%), Query Frame = 0


Query: 1   MKGTREDTNQRN---VNTNIKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSD 60
           M+  RE  NQ+N   VNTN KVERKVMEKNRRNQMKLLYS LNSLLP + S +SP TVSD
Sbjct: 1   MESNREAGNQQNQQDVNTN-KVERKVMEKNRRNQMKLLYSNLNSLLPPNKSTDSPLTVSD 60

Query: 61  QIEEATKYIKSLESKLKKDGEKKESFLRR-SSSSASTSCRNHNNNSPELKIKEMGSAVEV 120
           QIEEA KYIKSLE KL+K  EKKE  L R + SSA +   + NNNSPEL+IKEMGS VEV
Sbjct: 61  QIEEAIKYIKSLEMKLQKCMEKKERILARLNMSSALSDGASTNNNSPELRIKEMGSIVEV 120

Query: 121 VLTTGLEDQFVFYKIIRIFHEERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTE 180
           V T G EDQ +F ++I +FHEER +IIN +YSV  N+  YS+HAEIEDVVYE GA KL E
Sbjct: 121 VFTRGFEDQPLFDELIGVFHEERAEIINLNYSVHENMFLYSIHAEIEDVVYELGAKKLVE 180

Query: 181 RLKRLVYESKSEAKMQAAAASSSDHGAGTHAAAAYTPTTSSDVHF 222
           RL +LVYE KS+A+M A  ASSS HG GTH   A  PT SS  HF
Sbjct: 181 RLNKLVYEWKSDAEMVAGGASSSGHG-GTH-PPANIPTMSSGSHF 222

[Close]

BLAST of Tan0014399 vs. NCBI nr
Match: XP_023512282.1 (transcription factor bHLH162-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 3.0e-55
Identity = 131/192 (68.23%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 32  MKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDGEKKESFLRRSSSSA 91
           MKLLYSKLNSLLPTHHSNE P +VSDQIEEA KYIKSLE KLKKD EKKE F RRSSSS+
Sbjct: 1   MKLLYSKLNSLLPTHHSNELPLSVSDQIEEAIKYIKSLELKLKKDEEKKERFTRRSSSSS 60

Query: 92  S--TSCRNHNNNSPELKIKEMGSAVEVVLTTGLEDQFVFYKIIRIFHEERVKIINASYSV 151
           S     R  N N PEL+IKEMGS VEVVL+TGLED+F+FY+II IF+EER +I+N SYSV
Sbjct: 61  SYMAPTRTRNRNGPELRIKEMGSVVEVVLSTGLEDRFIFYEIIHIFYEERAEIVNVSYSV 120

Query: 152 LGNVAFYSLHAEIEDVVYEFGATKLTERLKRLVYESKSEAKMQAAAASSSDHGAGTHAAA 211
           +GN   YSLHAEIEDVVYEFGATK TER+KRLVY  +++A+M+AA +SSS  G       
Sbjct: 121 VGNSVLYSLHAEIEDVVYEFGATKPTERIKRLVYGWENDAEMKAAGSSSSHGGI---RRP 180

Query: 212 AYTPTTSSDVHF 222
              P+T SD  F
Sbjct: 181 GNGPSTCSDNQF 189

[Close]

BLAST of Tan0014399 vs. NCBI nr
Match: KAG6604790.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-54
Identity = 139/213 (65.26%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 2   KGTREDTNQRNVNTNIKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEE 61
           +G     NQ+N +TN KVERKV+EKNRRNQMKLLYS LNSLLP + S +SP TV DQIEE
Sbjct: 3   RGREAAGNQQNGSTN-KVERKVLEKNRRNQMKLLYSNLNSLLPPNKSTDSPLTVLDQIEE 62

Query: 62  ATKYIKSLESKLKKDGEKKESFLRRSSSSASTSCRNHNNNSPELKIKEMGSAVEVVLTTG 121
           A KYI+SL  KL K  EKK+  L       S   R+ ++N PELKIKEMGSAVEVV TT 
Sbjct: 63  AIKYIQSLTVKLDKVKEKKKRIL------TSAPTRSPSSNLPELKIKEMGSAVEVVFTTE 122

Query: 122 LEDQFVFYKIIRIFHEERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRL 181
           L D+F+FY+IIRIFHEERV+IINA+YSVL +   YSLHAEIEDV+Y FGATKLTERLKRL
Sbjct: 123 LNDRFLFYEIIRIFHEERVEIINATYSVLDDTVLYSLHAEIEDVLYAFGATKLTERLKRL 182

Query: 182 VYESKSEAKMQAAAASSSDHGAGTHAAAAYTPT 215
            YE KS+A+ QAA ASSS +G G+H +   TPT
Sbjct: 183 AYEWKSDAEQQAAGASSSGYG-GSHPSED-TPT 206

[Close]

BLAST of Tan0014399 vs. NCBI nr
Match: XP_023532358.1 (transcription factor bHLH162-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.0 bits (567), Expect = 2.6e-54
Identity = 138/213 (64.79%), Postives = 162/213 (76.06%), Query Frame = 0


Query: 2   KGTREDTNQRNVNTNIKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEE 61
           +G     NQ+N +TN KVERKV+EKNRRNQMKLLYS LNSLLP + S +SP T+ DQIEE
Sbjct: 3   RGREAAGNQQNGSTN-KVERKVLEKNRRNQMKLLYSNLNSLLPPNQSTDSPLTMLDQIEE 62

Query: 62  ATKYIKSLESKLKKDGEKKESFLRRSSSSASTSCRNHNNNSPELKIKEMGSAVEVVLTTG 121
           A KYI+SL  KL K  EKK+  L       S   R+ ++N PELKIKEMGSAVEVV TT 
Sbjct: 63  AIKYIQSLTVKLDKVKEKKKRIL------TSAPTRSPSSNLPELKIKEMGSAVEVVFTTE 122

Query: 122 LEDQFVFYKIIRIFHEERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRL 181
           L D+F+FY+IIRIFHEERV+IINA+YSVL +   YSLHAEIEDV+Y FGATKLTERLKRL
Sbjct: 123 LNDRFLFYEIIRIFHEERVEIINATYSVLDDTVLYSLHAEIEDVLYAFGATKLTERLKRL 182

Query: 182 VYESKSEAKMQAAAASSSDHGAGTHAAAAYTPT 215
            YE KS+A+ QAA ASSS +G G+H +   TPT
Sbjct: 183 AYEWKSDAEQQAAGASSSGYG-GSHPSED-TPT 206

[Close]

BLAST of Tan0014399 vs. ExPASy TrEMBL
Match: A0A6J1G8B1 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111451747 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.8e-54
Identity = 138/213 (64.79%), Postives = 161/213 (75.59%), Query Frame = 0


Query: 2   KGTREDTNQRNVNTNIKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEE 61
           +G     NQ+N +TN KVERKV+EKNRRNQMKLLYSKLNSLLP + S +SP TV DQIEE
Sbjct: 3   RGREAAGNQQNGSTN-KVERKVLEKNRRNQMKLLYSKLNSLLPPNQSTDSPLTVLDQIEE 62

Query: 62  ATKYIKSLESKLKKDGEKKESFLRRSSSSASTSCRNHNNNSPELKIKEMGSAVEVVLTTG 121
           A KYI+SL  KL K  EKK+  L       S   R+ ++N PELKIKEMGSAVEVV  T 
Sbjct: 63  AIKYIQSLTVKLDKVKEKKKRIL------MSAPTRSPSSNLPELKIKEMGSAVEVVFMTE 122

Query: 122 LEDQFVFYKIIRIFHEERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRL 181
           L D+F+FY+IIRIFHEER +IINA+YSVL +   YSLHAEIEDV+Y FGATKLTERLKRL
Sbjct: 123 LNDRFLFYEIIRIFHEERAEIINATYSVLDDTVLYSLHAEIEDVMYAFGATKLTERLKRL 182

Query: 182 VYESKSEAKMQAAAASSSDHGAGTHAAAAYTPT 215
            YE KS+A+ QAA ASSS +G G+H +   TPT
Sbjct: 183 AYEWKSDAEQQAAGASSSGYG-GSHPSED-TPT 206

[Close]

BLAST of Tan0014399 vs. ExPASy TrEMBL
Match: A0A6J1CGH0 (transcription factor bHLH162-like OS=Momordica charantia OX=3673 GN=LOC111011315 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 4.7e-54
Identity = 141/208 (67.79%), Postives = 159/208 (76.44%), Query Frame = 0


Query: 18  KVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDG 77
           KVERKVMEKNRRNQMKLLYSKL SLLP   SN +   VSDQ+EEA  YIKSLE+KLK+  
Sbjct: 25  KVERKVMEKNRRNQMKLLYSKLKSLLPDQPSNVA-MNVSDQVEEAINYIKSLETKLKRQQ 84

Query: 78  EKKESFLRRSSSSASTSCRNHNNNSPELKIKEMGSAVEVVLTTGLEDQFVFYKIIRIFHE 137
           EKKE  LR   SS+    R    N PELKI+EMGSAVEVVLT+GL D F+FY+II IF E
Sbjct: 85  EKKEWLLRSGRSSSDDVGR----NLPELKIREMGSAVEVVLTSGLGDWFIFYQIIHIFPE 144

Query: 138 ERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRLVYESKSEAKM-QAAAA 197
           ER +IINASYSVLG   FY+LHAEIEDVVYEFGA KLTERLK+LVY S S+A++ Q +AA
Sbjct: 145 ERAQIINASYSVLGTTVFYTLHAEIEDVVYEFGARKLTERLKKLVYGSTSDAEITQPSAA 204

Query: 198 SSSDHGAGTHAAAAYTPTTSSDVHFWSH 225
           +S  H  G  AAAAYTPTT +  HF SH
Sbjct: 205 ASYIHPPG--AAAAYTPTTYNP-HFRSH 224

[Close]

BLAST of Tan0014399 vs. ExPASy TrEMBL
Match: A0A6J1FXP8 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111448656 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.0e-53
Identity = 130/195 (66.67%), Postives = 152/195 (77.95%), Query Frame = 0


Query: 32  MKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDGEKKESFLRRSSSSA 91
           MK LYSKLNSLLPTHHSNE P +V DQIEEA KYIKSLE KLKKD EKKE F RRSSSS+
Sbjct: 1   MKSLYSKLNSLLPTHHSNELPLSVLDQIEEAIKYIKSLELKLKKDEEKKERFTRRSSSSS 60

Query: 92  -STSCRNHNNNSPELKIKEMGSAVEVVLTTGL-EDQFVFYKIIRIFHEERVKIINASYSV 151
                R+ N N PEL+IKEMGSAVEVVL+TGL ED+F+FY+II IF+EER +I+N SYSV
Sbjct: 61  YMAPTRSRNRNGPELRIKEMGSAVEVVLSTGLEEDRFIFYEIIHIFYEERAEIVNVSYSV 120

Query: 152 LGNVAFYSLHAEIEDVVYEFGATKLTERLKRLVYESKSEAKMQAAAASSSDHGAGTHAAA 211
           +GN   YSL+AEIEDVVYEFGATK TER+KRLVY  +++A+M+AA +SSS  G       
Sbjct: 121 VGNSVLYSLYAEIEDVVYEFGATKPTERIKRLVYGWENDAEMKAAGSSSSHGGI---RRP 180

Query: 212 AYTPTTSSDVHFWSH 225
              P+T SD  F+SH
Sbjct: 181 GNGPSTCSDNQFYSH 192

[Close]

BLAST of Tan0014399 vs. ExPASy TrEMBL
Match: A0A6J1JF05 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111483908 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.4e-51
Identity = 125/192 (65.10%), Postives = 149/192 (77.60%), Query Frame = 0


Query: 32  MKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDGEKKESFLRRSSSSA 91
           MK LYSKLNSLLPTHHSNE P +VSDQIEEA KYIKSLE KLKK+ EKKE F R+SSSS 
Sbjct: 1   MKSLYSKLNSLLPTHHSNEMPLSVSDQIEEAIKYIKSLELKLKKNEEKKERFTRQSSSSL 60

Query: 92  STS-CRNHNNNSPELKIKEMGSAVEVVLTTGL-EDQFVFYKIIRIFHEERVKIINASYSV 151
            T+  R+ N N PEL+IKE+GSAVEVVL+ GL ED+F+FY+II IF++ER +I+N SYSV
Sbjct: 61  YTAPTRSRNRNGPELRIKEIGSAVEVVLSIGLEEDRFIFYEIIHIFYQERAEIVNVSYSV 120

Query: 152 LGNVAFYSLHAEIEDVVYEFGATKLTERLKRLVYESKSEAKMQAAAASSSDHGAGTHAAA 211
           +GN   YSLHAEIEDVVYEFGATK TER+KRLVY   ++ +M+AA +SSS  G+      
Sbjct: 121 VGNSVLYSLHAEIEDVVYEFGATKPTERIKRLVYGWANDGEMKAAGSSSSFGGS---RRP 180

Query: 212 AYTPTTSSDVHF 222
              P+T SD  F
Sbjct: 181 GNGPSTCSDNQF 189

[Close]

BLAST of Tan0014399 vs. ExPASy TrEMBL
Match: A0A6J1G8Q1 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111451748 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 128/199 (64.32%), Postives = 150/199 (75.38%), Query Frame = 0


Query: 24  MEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDGEKKESF 83
           MEKNRRNQMKLLYS LNSLLP + S +SP TVSDQIEEA KYIKSLE KL+K  EKKE  
Sbjct: 1   MEKNRRNQMKLLYSNLNSLLPPNQSTDSPLTVSDQIEEAIKYIKSLEMKLQKCKEKKERI 60

Query: 84  LRRSSSSASTSCR-NHNNNSPELKIKEMGSAVEVVLTTGLEDQFVFYKIIRIFHEERVKI 143
           L R + S++ S R + NNNSPEL+IKEMGS VEVV T G ED+ +F ++I +FHEER +I
Sbjct: 61  LARLNMSSALSDRASTNNNSPELRIKEMGSIVEVVFTRGFEDRSLFDELIGVFHEERAEI 120

Query: 144 INASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRLVYESKSEAKMQAAAASSSDHG 203
           IN +YSV  ++  YS+HA+IEDVVYE GA KL ERL +LVYE KS+A+M A  ASSS HG
Sbjct: 121 INLNYSVHEDMFLYSIHAQIEDVVYELGAKKLVERLNKLVYEWKSDAEMLAGGASSSGHG 180

Query: 204 AGTHAAAAYTPTTSSDVHF 222
            GTH   A  PT SS  HF
Sbjct: 181 -GTH-PPANIPTMSSGRHF 197

[Close]

BLAST of Tan0014399 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 71/188 (37.77%), Postives = 119/188 (63.30%), Query Frame = 0


Query: 7   DTNQRNVNTNIKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYI 66
           + +  N   +  V+RK +EKNRR QMK LYS+L SLLP HHS+  P T+ DQ++EA  YI
Sbjct: 2   EPSHSNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLP-HHSSTEPLTLPDQLDEAANYI 61

Query: 67  KSLESKLKKDGEKKESF-----LRRSSSSASTSCRNHNNNS-----PELKIKEMGSAVEV 126
           K L+  ++K  E+K +      L + +S  S+S  +  + S     P+++I+E GS   +
Sbjct: 62  KKLQVNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKLPKIEIQETGSIFHI 121

Query: 127 VLTTGLEDQFVFYKIIRIFHEE-RVKIINASYSVLGNVAFYSLHAEIEDVVYEFGA-TKL 183
            L T LE +F+F +IIR+  EE   +I +A YS++ +  F++LH ++E+  +++GA +++
Sbjct: 122 FLVTSLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEE--HDYGARSQI 181

[Close]

BLAST of Tan0014399 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 9.5e-07
Identity = 45/172 (26.16%), Postives = 84/172 (48.84%), Query Frame = 0


Query: 18  KVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDG 77
           K+  +  E+ RR +M  LY+ L SLLP H       T SDQ+ EA  YIK L+ K+K+  
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRST-SDQVNEAVNYIKYLQRKIKELS 62

Query: 78  EKKESFLRRSSSSASTSCRNHNNNSPEL-------KIKEMGSAVEVVLTTG-LEDQFVFY 137
            +++  +  S  S   S         E+        +++    VE++L++     Q  F 
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFS 122

Query: 138 KIIRIFHEERVKIINASYSVLGNVAFYSLHAEIEDVVYEFGATKLTERLKRL 182
            ++++  E  + ++N+  S++ +   Y++ AE+ D+       +L +RL R+
Sbjct: 123 SVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of Tan0014399 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 40/149 (26.85%), Postives = 74/149 (49.66%), Query Frame = 0


Query: 18  KVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPPTVSDQIEEATKYIKSLESKLKKDG 77
           K+  K +EK RR +M  LY+ L SLLP     +   + SDQ++ A  YI  L+  +K   
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFI-QGKRSTSDQVKGAVNYIDYLQRNIKDIN 62

Query: 78  EKKESFLRRSSSS-ASTSCRNHNNNSPELKIKEMGSAVEVVLTTGLEDQFVFYKIIRIFH 137
            K++  +  S  S  S++ +  N  S  + I+     +E+VL+     Q  F  ++++  
Sbjct: 63  SKRDDLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSI---LQTPFSSVLQVLR 122

Query: 138 EERVKIINASYSVLGNVAFYSLHAEIEDV 166
           E  + ++    S + +   ++L AE+ D+
Sbjct: 123 EHGLYVLGYICSSVNDRLIHTLQAEVNDL 147

The following BLAST results are available for this feature:

BLAST of Tan0014399 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	1.7e-21	37.77	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]
Q9FLI1	1.3e-05	26.16	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]

BLAST of Tan0014399 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902351.1	8.5e-58	65.16	transcription factor bHLH162-like [Benincasa hispida]	[more]
KAG6604789.1	4.7e-56	65.33	Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma...	[more]
XP_023512282.1	3.0e-55	68.23	transcription factor bHLH162-like [Cucurbita pepo subsp. pepo]	[more]
KAG6604790.1	1.5e-54	65.26	Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma...	[more]
XP_023532358.1	2.6e-54	64.79	transcription factor bHLH162-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0014399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8B1	2.8e-54	64.79	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111451747 ...	[more]
A0A6J1CGH0	4.7e-54	67.79	transcription factor bHLH162-like OS=Momordica charantia OX=3673 GN=LOC111011315...	[more]
A0A6J1FXP8	1.0e-53	66.67	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111448656 ...	[more]
A0A6J1JF05	6.4e-51	65.10	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111483908 PE...	[more]
A0A6J1G8Q1	1.1e-50	64.32	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111451748 ...	[more]

BLAST of Tan0014399 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	1.2e-22	37.77	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	9.5e-07	26.16	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	2.0e-04	26.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 22..75 e-value: 1.6E-5 score: 34.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 20..70 e-value: 2.4E-8 score: 33.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 16..69 score: 12.264783
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 18..94 e-value: 9.3E-9 score: 37.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 17..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..104
None	No IPR available	PANTHER	PTHR13935:SF63	HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN	coord: 17..189
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 17..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014399.1	Tan0014399.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity