Tan0014264 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATGCTTCAAGGTTTTGAATGCAATAGAGGATCTTGATGGAGAGTCTTATACTAAAATACTCAAACTTTTGCATGGAGATGTTGCTTGGAGAAAGTTATTTTTGCTTATGCCTGATGCGAGGAAGAAAGATTTCATACGTAGTATCTAGATTTCACAATGCTTTTTAGTATCTCATTCGTAGGAAGAAAATTATTTTTGGTTTTTTTTTGGCTTTTTGACTCGAACTTGAAGCTTGGTTGTATTGATATTGTATTTCTGGTGACTATTTTTGGGATATTAACTTTTGTGATGTCATTTGCTTTTTCTCATATTAAACTTAATCATCGAATTATGTGATTTGATTATATGCTTTCATGTTGCTCATGTTTGATTCAGGGATATCCTTATGGATTTAATTGAAGACAATGACTTGATATTAGATTCTGACGAAGACGATGATGTTGTATACATCTTTTTGAATTTATTGTTCGTTGGCTTTCACAAGATGCAATCTTCTAAGCAACCATGTAGAACATCTTTACTAAAAGGTCATGATTATGTGATTGAGCTACTAAGTGGCAACGAGACAAGATGCTTTGATTGCTTTAGGATGAAAAAAAATACATTCATAGCTTTTTGTGAAGATTTAAAAGCGAAAACAAATTTGAAAGCTTCTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTGATCATATCACATAATGAGAAAAATCGTATAGCAGCAGAAAGGTTTCAACATTCGGGTCAAACTATTTCTCGAGTTTTTAACCTTGTTTTGAAAAAAGTTTTGAAGCTTGGAGTAGAAATCATTTGTCCACCCGATGTAGACAATGTACCACCAGAGATCACATCTAAACCTAAATATTACCCTTTCTTTAAGGTAATGCATTCAATTTTTTTTTTCACAAACATAACATTTTTAAAATATATTTATAGTCATATATATCTTTTTTAG ATGGAATGCTTCAAGGTTTTGAATGCAATAGAGGATCTTGATGGAGAGTCTTATACTAAAATACTCAAACTTTTGCATGGAGATGTTGCTTGGAGAAAGTTATTTTTGCTTATGCCTGATGCGAGGAAGAAAGATTTCATACGTCATGATTATGTGATTGAGCTACTAAGTGGCAACGAGACAAGATGCTTTGATTGCTTTAGGATGAAAAAAAATACATTCATAGCTTTTTGTGAAGATTTAAAAGCGAAAACAAATTTGAAAGCTTCTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTGATCATATCACATAATGAGAAAAATCGTATAGCAGCAGAAAGGTTTCAACATTCGGGTCAAACTATTTCTCGAGTTTTTAACCTTGTTTTGAAAAAAGTTTTGAAGCTTGGAGTAGAAATCATTTGTCCACCCGATGTAGACAATGTACCACCAGAGATCACATCTAAACCTAAATATTACCCTTTCTTTAAGGTAATGCATTCAATTTTTTTTTTCACAAACATAACATTTTTAAAATATATTTATAGTCATATATATCTTTTTTAG ATGGAATGCTTCAAGGTTTTGAATGCAATAGAGGATCTTGATGGAGAGTCTTATACTAAAATACTCAAACTTTTGCATGGAGATGTTGCTTGGAGAAAGTTATTTTTGCTTATGCCTGATGCGAGGAAGAAAGATTTCATACGTCATGATTATGTGATTGAGCTACTAAGTGGCAACGAGACAAGATGCTTTGATTGCTTTAGGATGAAAAAAAATACATTCATAGCTTTTTGTGAAGATTTAAAAGCGAAAACAAATTTGAAAGCTTCTAGGTATCTTACTGTTCAAGAGAAAGTTGCCATTTTTTTATTGATCATATCACATAATGAGAAAAATCGTATAGCAGCAGAAAGGTTTCAACATTCGGGTCAAACTATTTCTCGAGTTTTTAACCTTGTTTTGAAAAAAGTTTTGAAGCTTGGAGTAGAAATCATTTGTCCACCCGATGTAGACAATGTACCACCAGAGATCACATCTAAACCTAAATATTACCCTTTCTTTAAGGTAATGCATTCAATTTTTTTTTTCACAAACATAACATTTTTAAAATATATTTATAGTCATATATATCTTTTTTAG MECFKVLNAIEDLDGESYTKILKLLHGDVAWRKLFLLMPDARKKDFIRHDYVIELLSGNETRCFDCFRMKKNTFIAFCEDLKAKTNLKASRYLTVQEKVAIFLLIISHNEKNRIAAERFQHSGQTISRVFNLVLKKVLKLGVEIICPPDVDNVPPEITSKPKYYPFFKVMHSIFFFTNITFLKYIYSHIYLF Homology
BLAST of Tan0014264 vs. NCBI nr
Match: KAF3433792.1 (hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]) HSP 1 Score: 204.5 bits (519), Expect = 8.1e-49 Identity = 104/197 (52.79%), Postives = 136/197 (69.04%), Query Frame = 0
BLAST of Tan0014264 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]) HSP 1 Score: 183.0 bits (463), Expect = 2.5e-42 Identity = 98/217 (45.16%), Postives = 124/217 (57.14%), Query Frame = 0
BLAST of Tan0014264 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]) HSP 1 Score: 182.6 bits (462), Expect = 3.3e-42 Identity = 97/218 (44.50%), Postives = 124/218 (56.88%), Query Frame = 0
BLAST of Tan0014264 vs. NCBI nr
Match: XP_030481634.1 (protein ALP1-like [Cannabis sativa]) HSP 1 Score: 165.2 bits (417), Expect = 5.4e-37 Identity = 80/177 (45.20%), Postives = 111/177 (62.71%), Query Frame = 0
BLAST of Tan0014264 vs. NCBI nr
Match: KAG8372299.1 (hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia]) HSP 1 Score: 161.4 bits (407), Expect = 7.8e-36 Identity = 81/168 (48.21%), Postives = 109/168 (64.88%), Query Frame = 0
BLAST of Tan0014264 vs. ExPASy TrEMBL
Match: A0A0A0LCZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36 Identity = 91/178 (51.12%), Postives = 106/178 (59.55%), Query Frame = 0
BLAST of Tan0014264 vs. ExPASy TrEMBL
Match: A0A6A4KNZ4 (Myb_DNA-bind_3 domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_22962 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 5.1e-33 Identity = 76/152 (50.00%), Postives = 99/152 (65.13%), Query Frame = 0
BLAST of Tan0014264 vs. ExPASy TrEMBL
Match: A0A443P2U0 (Protein ALP1-like protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01388400 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 6.1e-26 Identity = 65/154 (42.21%), Postives = 99/154 (64.29%), Query Frame = 0
BLAST of Tan0014264 vs. ExPASy TrEMBL
Match: A0A2N9GND4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28895 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 6.1e-26 Identity = 60/121 (49.59%), Postives = 89/121 (73.55%), Query Frame = 0
BLAST of Tan0014264 vs. ExPASy TrEMBL
Match: A0A445H7N1 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_038996 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.3e-24 Identity = 61/134 (45.52%), Postives = 84/134 (62.69%), Query Frame = 0
BLAST of Tan0014264 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 2.6e-13 Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Tan0014264 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12 Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 0
BLAST of Tan0014264 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 9.6e-08 Identity = 32/115 (27.83%), Postives = 53/115 (46.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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