Tan0014235 (gene) Snake gourd v1

Overview


Name	Tan0014235
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	agamous-like MADS-box protein AGL14
Location	LG04: 77566238 .. 77568480 (+)
RNA-Seq Expression	Tan0014235
Synteny	Tan0014235

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATATATTTTGGACCGTCGGATGTTGTATTTGGTTAATGGACGATGCGGATTGAGATTGGGTTTAAAATCCCAACCTTCGACTCGTCTCTCTCAGTCCTCTTCCCGCTGGGCAGCGCCAAGCAAACGAAACGAATTTCATCATCTTCCTCTCTCTGTCTCTTTCTTCATCTCTCTGGAATTCTTGTGTTGGAGTTTTTGTGTTGCAGCGATGGGAAGAGGAAAGCTGAATCTGAAACTTATTTCAAATCGGAAATCACGAATGTCGACGTTCAAGAAGAGGAAAAATAGCTTGCTGAAGAAATCTTATGAGCTGTCGACGCTTTGCGACGTTCGAATGTGCGTTCTGATCAATGGCCCTTCTTCTGATGACGATCGATCACACTCTGATTTGGATTTTCACACTTGGCCTACCAATCGCAGTGAAATCCAAACTTTGATTCGAGCCTACAAAATCAATCTCCGGCAGAAACGGAAGGGTTTCGATTTGTCTGACTTTTTCTCTGATCGGAAGGCCAAAATCGAAACGGAAATCCTCAAACTTCGTCAGAATCTTCAAGAAGTTGTACGCCCTAACTGGGACGACCAACTCGATCATTTGTCCGAACAGGAACTCAGAGCTTTCATGGACGCCCTCGATTCCAAAATCGAAACGGTCACTGGGATGATCCAGTTTTCTTCAAATTCTGTTCAAATGGAAGCAAGGGATTTTAATCCTCCAGTAGATGAATTGGAGGACTTCAATGGCTCTGAAGATCAACCTGCCTTTAATTCTGAGGACCTTCAATCCCTCTTCTTCGAGGAAGACGACGACATCGATATGGAATTCATTATGCACTGCAGAAATCTCATGAACGATGAATTCGACTATGCCAATAATCTCGAGCATTTGATGATGGCGGGTACTTCTACTCACTGATGAAATTCATTTTGATTTAGTACTAAACTAACTCATTTTTTGTAGTCAAAAGTATAAAGGGTATGAGAGTTTCTCACTCTCTATGTTTGTTACTTATGTACTAATCAATTCTCTGAATAGAAATGAAATACTAGTCTTCCGACTTTCTTCTTTCTTTTTGTGTAAATTATTCTTCTTTTTCTTTATGACTACAATTTGAATGAGCTTGGCTCTTAATTTTTGTAACTTATTGACAACTCTTCGTTAGATATCACTCAAAATTGGCAGTCGCGTAACCTTAAATGAGTTCAAGTGCCTTCTGTGTTGATCAAGTGTATATAATAGAACACAATTTCTATTTTAGCTTTTCGTCCCTTAGCATTGCAATGTGGCTCTAAATACAAAATAAACATATCTCAAAATTGTGGAATCATTAAAACAATTGAGGTGCAGTATCGTCTGGGATTGAGAAAAAGTTAGGTTCTAATTCTGTTGTACTTCGACTTGATTGTTCTCAATCTTACTTTGGAAGTAGCTTGCGAACTGTCATATTTGAGTAAGGATCATAATTCCTCTAGTTGTGAGACAAGAGTGTCTATTATTTGAACTAATTCATATATTAGAATATGAGATCGAACAACTTGATATGCTTAGTTTTCAAAAAATATTCTTCATTGTCTTTTTATGTTTAGAATACCTGGTTATTACATTTTAGCACCATGGTTGTAACATTTTCCATCGATCAAATGAAAATCATAGCATGTGTTGTGGCAATTATGGGGCAAGAGTTTGGATGATATGGATATAATCTGATTCAAATTCATTTTGCTTGATGATCTATAAAAGATTTTCTGATTAGAAGGGTTGCAAAAACAGATCCTCAGTATGGGGTTGGTTTTTTTCTTCAATTGTCTTAAGAAGGATATTATGAAAAACTTTGTAACATACATGACATTATTCGTAGGCTGTGACTTTAGCAGATGAAACCACTGAATTACCTACCCAAGCAATTACCTCTGCCATTATTTCTCCTCACTAAATAATGTCCTTCTTTTGTTGATTTATCTTTTGTTCATTGATCTCTTCCTTCTTCAATCATTCAAAGGCCTTTTCAAATAGAACTTTGGAATTCCACTTTTTCTTTTGGTCTACCTTTAATGCTGCAGGTTGTTATTTCAGTTCATGTTTTTTTCGCAACATTTTTGGGCTGCATTTAGGAATGGGAATATATGATGCAATGAAGTTGTGTAAGGTCGATATTTCAACCTCTTGGTGTAAGAAATAGCAGCACCAGTCATCATGCCACTCCCACAAACAGCCACATCAGCACTGCTACATCAGCAAG

mRNA sequence

GAAATATATTTTGGACCGTCGGATGTTGTATTTGGTTAATGGACGATGCGGATTGAGATTGGGTTTAAAATCCCAACCTTCGACTCGTCTCTCTCAGTCCTCTTCCCGCTGGGCAGCGCCAAGCAAACGAAACGAATTTCATCATCTTCCTCTCTCTGTCTCTTTCTTCATCTCTCTGGAATTCTTGTGTTGGAGTTTTTGTGTTGCAGCGATGGGAAGAGGAAAGCTGAATCTGAAACTTATTTCAAATCGGAAATCACGAATGTCGACGTTCAAGAAGAGGAAAAATAGCTTGCTGAAGAAATCTTATGAGCTGTCGACGCTTTGCGACGTTCGAATGTGCGTTCTGATCAATGGCCCTTCTTCTGATGACGATCGATCACACTCTGATTTGGATTTTCACACTTGGCCTACCAATCGCAGTGAAATCCAAACTTTGATTCGAGCCTACAAAATCAATCTCCGGCAGAAACGGAAGGGTTTCGATTTGTCTGACTTTTTCTCTGATCGGAAGGCCAAAATCGAAACGGAAATCCTCAAACTTCGTCAGAATCTTCAAGAAGTTGTACGCCCTAACTGGGACGACCAACTCGATCATTTGTCCGAACAGGAACTCAGAGCTTTCATGGACGCCCTCGATTCCAAAATCGAAACGGTCACTGGGATGATCCAGTTTTCTTCAAATTCTGTTCAAATGGAAGCAAGGGATTTTAATCCTCCAGTAGATGAATTGGAGGACTTCAATGGCTCTGAAGATCAACCTGCCTTTAATTCTGAGGACCTTCAATCCCTCTTCTTCGAGGAAGACGACGACATCGATATGGAATTCATTATGCACTGCAGAAATCTCATGAACGATGAATTCGACTATGCCAATAATCTCGAGCATTTGATGATGGCGGGTTGTTATTTCAGTTCATGTTTTTTTCGCAACATTTTTGGGCTGCATTTAGGAATGGGAATATATGATGCAATGAAGTTGTGTAAGGTCGATATTTCAACCTCTTGGTGTAAGAAATAGCAGCACCAGTCATCATGCCACTCCCACAAACAGCCACATCAGCACTGCTACATCAGCAAG

Coding sequence (CDS)

ATGTTGTATTTGGTTAATGGACGATGCGGATTGAGATTGGGTTTAAAATCCCAACCTTCGACTCGTCTCTCTCAGTCCTCTTCCCGCTGGGCAGCGCCAAGCAAACGAAACGAATTTCATCATCTTCCTCTCTCTGTCTCTTTCTTCATCTCTCTGGAATTCTTGTGTTGGAGTTTTTGTGTTGCAGCGATGGGAAGAGGAAAGCTGAATCTGAAACTTATTTCAAATCGGAAATCACGAATGTCGACGTTCAAGAAGAGGAAAAATAGCTTGCTGAAGAAATCTTATGAGCTGTCGACGCTTTGCGACGTTCGAATGTGCGTTCTGATCAATGGCCCTTCTTCTGATGACGATCGATCACACTCTGATTTGGATTTTCACACTTGGCCTACCAATCGCAGTGAAATCCAAACTTTGATTCGAGCCTACAAAATCAATCTCCGGCAGAAACGGAAGGGTTTCGATTTGTCTGACTTTTTCTCTGATCGGAAGGCCAAAATCGAAACGGAAATCCTCAAACTTCGTCAGAATCTTCAAGAAGTTGTACGCCCTAACTGGGACGACCAACTCGATCATTTGTCCGAACAGGAACTCAGAGCTTTCATGGACGCCCTCGATTCCAAAATCGAAACGGTCACTGGGATGATCCAGTTTTCTTCAAATTCTGTTCAAATGGAAGCAAGGGATTTTAATCCTCCAGTAGATGAATTGGAGGACTTCAATGGCTCTGAAGATCAACCTGCCTTTAATTCTGAGGACCTTCAATCCCTCTTCTTCGAGGAAGACGACGACATCGATATGGAATTCATTATGCACTGCAGAAATCTCATGAACGATGAATTCGACTATGCCAATAATCTCGAGCATTTGATGATGGCGGGTTGTTATTTCAGTTCATGTTTTTTTCGCAACATTTTTGGGCTGCATTTAGGAATGGGAATATATGATGCAATGAAGTTGTGTAAGGTCGATATTTCAACCTCTTGGTGTAAGAAATAG

Protein sequence

MLYLVNGRCGLRLGLKSQPSTRLSQSSSRWAAPSKRNEFHHLPLSVSFFISLEFLCWSFCVAAMGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSDLDFHTWPTNRSEIQTLIRAYKINLRQKRKGFDLSDFFSDRKAKIETEILKLRQNLQEVVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFSSNSVQMEARDFNPPVDELEDFNGSEDQPAFNSEDLQSLFFEEDDDIDMEFIMHCRNLMNDEFDYANNLEHLMMAGCYFSSCFFRNIFGLHLGMGIYDAMKLCKVDISTSWCKK

Homology

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BLAST of Tan0014235 vs. ExPASy Swiss-Prot
Match: Q9FIM0 (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-13
Identity = 50/162 (30.86%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 69  LNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSDLDFHT 128
           ++L+ I+N K+R++T+KKRK SL KK+ E STLC V  C+++ GP+   D   S+ +   
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEI-- 65

Query: 129 WPTNRSEIQTLIRAYKINLRQK-RKGFDLSDFFSDRKAKIETEILKLRQNLQEVVRPNWD 188
           WP + ++++ +IR YK  +    RK  ++  F +D       E++  ++  +E    +W+
Sbjct: 66  WPKDETKVRAIIRKYKDTVSTSCRKETNVETFVND--VGKGNEVVTKKRVKRENKYSSWE 125

Query: 189 DQLDHLSEQELRAFMDALDSKIETVTGMIQFSSNSVQMEARD 230
           ++LD  S ++L     A+DSK+       + S   V  +A D
Sbjct: 126 EKLDKCSREQLHGIFCAVDSKLNEAVTRQERSMFRVNHQAMD 163

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BLAST of Tan0014235 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.0e-09
Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           M R K+ L  ISN  SR +TFKKRK  L+KK +ELSTLC +  C +I  P         D
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSP--------YD 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKI--NLRQKRKGFDLSDFFSDRKAKIETEILKLRQNLQEV 182
            +   WP+N S +Q ++  ++    + Q +K  D   F   R AK    + + R++ +E+
Sbjct: 61  TNPEVWPSN-SGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSREL 111

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BLAST of Tan0014235 vs. ExPASy Swiss-Prot
Match: P0C5B0 (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica OX=39946 GN=MADS7 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 2.5e-08
Identity = 48/152 (31.58%), Postives = 74/152 (48.68%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGRG++ LK I N+ +R  TF KR+N LLKK+YELS LCD  + ++I             
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG-------- 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQKRKGFDLSDFFSDRKAKIETEILKLR---QNLQE 183
              + + + +S  +TL +  K +           +  S++      E LKL+   +NLQ 
Sbjct: 61  -KLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRE--SEQLKASRNEYLKLKARVENLQR 120

Query: 184 VVRPNWDDQLDHLSEQELRAFMDALDSKIETV 213
             R    + LD L  +EL +    LDS ++ V
Sbjct: 121 TQRNLLGEDLDSLGIKELESLEKQLDSSLKHV 141

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BLAST of Tan0014235 vs. ExPASy Swiss-Prot
Match: Q0J466 (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS7 PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 2.5e-08
Identity = 48/152 (31.58%), Postives = 74/152 (48.68%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGRG++ LK I N+ +R  TF KR+N LLKK+YELS LCD  + ++I             
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG-------- 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQKRKGFDLSDFFSDRKAKIETEILKLR---QNLQE 183
              + + + +S  +TL +  K +           +  S++      E LKL+   +NLQ 
Sbjct: 61  -KLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRE--SEQLKASRNEYLKLKARVENLQR 120

Query: 184 VVRPNWDDQLDHLSEQELRAFMDALDSKIETV 213
             R    + LD L  +EL +    LDS ++ V
Sbjct: 121 TQRNLLGEDLDSLGIKELESLEKQLDSSLKHV 141

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BLAST of Tan0014235 vs. ExPASy Swiss-Prot
Match: O04067 (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba OX=3728 GN=AGL9 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-08
Identity = 54/175 (30.86%), Postives = 82/175 (46.86%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGRG++ LK I N+ +R  TF KR+N LLKK+YELS LCD  + ++I             
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG-------- 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQKRKGFDLSDFFSDRKAKIETEILKLRQN---LQE 183
              + + ++ S I+TL R  K N           +  +   +  + E LKL++    LQ 
Sbjct: 61  -KLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSS-QQEYLKLKERYDALQR 120

Query: 184 VVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGM-IQF---SSNSVQMEARDFN 232
             R    + L  LS +EL      LDS ++ +  +  QF     N +Q + R  N
Sbjct: 121 TQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLN 165

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BLAST of Tan0014235 vs. NCBI nr
Match: XP_023528957.1 (agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.2 bits (513), Expect = 6.9e-48
Identity = 127/262 (48.47%), Postives = 169/262 (64.50%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP--SSDDDRSH 123
           M RGKL+  LI NRKSR STFK+RKNSL+KK+YELSTLCDVR CVLINGP  + D+D S 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 124 SDLDFHTWPTNRSEIQTLIRAYK---INLRQKRKGFDLSDFFSDRKAKIETEILKLRQNL 183
           S ++FHTWP+NRSE++ +I AYK    NL QKRK FDLSD+FSDRK K+ TE+ K R+ +
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNL-QKRKCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 184 QEVVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFS----------------SNS 243
            +++ P+WD++LD LSEQ+LR FM+ LDS+IE    MI F                  N 
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYENV 180

Query: 244 VQM--EARDFNPPVDELE--------DFNGSEDQPAFNSEDLQSLFFEEDDDIDMEFIMH 295
           VQM  ++    PP+ ELE        + N +ED+   N E+L+ L  +ED++    ++  
Sbjct: 181 VQMGGDSSTPVPPLVELESPDSLNTPNPNPNEDEIGCNFENLEFLLEDEDEN----YMAL 240

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BLAST of Tan0014235 vs. NCBI nr
Match: XP_022983430.1 (agamous-like MADS-box protein AGL14 [Cucurbita maxima])

HSP 1 Score: 202.2 bits (513), Expect = 6.9e-48
Identity = 127/262 (48.47%), Postives = 165/262 (62.98%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP--SSDDDRSH 123
           M RGKL+  LI NRKSR STFK+RKNSL+KK+YELSTLCDVR CVLINGP  + D+D S 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 124 SDLDFHTWPTNRSEIQTLIRAYK---INLRQKRKGFDLSDFFSDRKAKIETEILKLRQNL 183
           S ++FHTWP+NRSE++ +I AYK    NL QKRK FDLSD+FSDRK K+ TE+ K R+ +
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNL-QKRKCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 184 QEVVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFS----------------SNS 243
            +++ P+WD++LD LSEQ+LR FM+ LDS+IE    MI F                  N 
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYENV 180

Query: 244 VQMEARDFNPPVD--ELEDF--------NGSEDQPAFNSEDLQSLFFEEDDDIDMEFIMH 295
           VQM      P +   ELE          N  ED+   N E+L+ L  +ED++    ++  
Sbjct: 181 VQMGGDSSTPVLSLVELESTDSLNSPNPNPDEDEIGCNFENLEYLLEDEDEN----YMAL 240

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BLAST of Tan0014235 vs. NCBI nr
Match: XP_022935361.1 (agamous-like MADS-box protein AGL14 [Cucurbita moschata])

HSP 1 Score: 199.5 bits (506), Expect = 4.5e-47
Identity = 124/261 (47.51%), Postives = 165/261 (63.22%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP--SSDDDRSH 123
           M RGKL+  LI NRKSR STFK+RKNSL+KK+YELSTLCDVR CVLINGP  + D+D S 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 124 SDLDFHTWPTNRSEIQTLIRAYK---INLRQKRKGFDLSDFFSDRKAKIETEILKLRQNL 183
           S ++FHTWP+NRSE++ +I AYK    N  QKRK FDLSD+FSDRK K+ TE+ K R+ +
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNF-QKRKCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 184 QEVVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFS----------------SNS 243
            +++ P+WD++LD LSEQ+LR FM+ LDS+IE    M+ F                  N 
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMVDFMDADNENLFGMFSCEEYENV 180

Query: 244 VQMEARDFNPPV---------DELEDFNGSEDQPAFNSEDLQSLFFEEDDDIDMEFIMHC 295
           VQM   D + PV         D L   N ++ +   N E+L+ L  +ED++    ++   
Sbjct: 181 VQM-GGDSSTPVPPLVELESPDSLNSPNPNKHEIGCNFENLEFLLEDEDEN----YMALY 240

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BLAST of Tan0014235 vs. NCBI nr
Match: KAG6581223.1 (Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.4 bits (498), Expect = 3.8e-46
Identity = 125/264 (47.35%), Postives = 167/264 (63.26%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP--SSDDDRSH 123
           M RGKL+  LI NRKSR STFK+RKNSL+KK+YELSTLCDVR CVLINGP  + D+D S 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 124 SDLDFHTWPTNRSEIQTLIRAYK---INLRQKRKGFDLSDFFSDRKAKIETEILKLRQNL 183
             ++FHTWP+NRSE++ +I AYK    NL QKRK FDLSD+FSDRK K+ TE+ K R+ +
Sbjct: 61  FSVEFHTWPSNRSEVEHMIHAYKNGNCNL-QKRKCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 184 QEVVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFS----------------SNS 243
            +++ P+WD++LD LSEQ+LR FM+ LDS+IE    MI F                  N 
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYENV 180

Query: 244 VQM--EARDFNPPVDELE----------DFNGSEDQPAFNSEDLQSLFFEEDDDIDMEFI 295
           VQM  ++    PP+ ELE          + N +E +   N E+L+ L  +ED++    ++
Sbjct: 181 VQMGGDSSTPVPPLVELESPDSLNSPNPNPNPNEHEIGCNFENLEFLLEDEDEN----YM 240

[Close]

BLAST of Tan0014235 vs. NCBI nr
Match: XP_038887059.1 (agamous-like MADS-box protein AGL82, partial [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 2.5e-42
Identity = 117/231 (50.65%), Postives = 147/231 (63.64%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSS--DDDRSH 123
           MGRGKL+L LI NRKSR+STFKKRKNSL+KK+YELSTLCDV+ CVL++GP+S   +D S 
Sbjct: 1   MGRGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVQTCVLVHGPASLPTEDPSQ 60

Query: 124 SDLDFHTWPTNRSEIQTLIRAYKINLR---QKRKGFDLSDFFSDRKAKIETEILKLRQNL 183
           SDL+FHTWP++R+ ++ +IRAYK       QK K F L+D+FSDRK KIE+E  KLR   
Sbjct: 61  SDLEFHTWPSDRTHLEAMIRAYKTTRSCNFQKCKCFGLTDYFSDRKRKIESETCKLR--- 120

Query: 184 QEVVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQF--------------SSNSVQ 243
           ++ + P WD+ LD LSE ELR FM+ LD+KIE   GMI F              S NSVQ
Sbjct: 121 EKFMCPKWDEWLDRLSEHELREFMEGLDAKIEAANGMIDFMELADHENLFGELCSENSVQ 180

Query: 244 MEARDFN----PPVDELEDFNGS---EDQPAFNSED----LQSLFFEEDDD 265
           M          P VD+L     +   ED  A +  D    LQ L  EE++D
Sbjct: 181 MGEDSIPQVLIPSVDDLFATGANHTEEDVMALDEIDNIRYLQMLLGEEEED 228

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BLAST of Tan0014235 vs. ExPASy TrEMBL
Match: A0A6J1J5U6 (agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.3e-48
Identity = 127/262 (48.47%), Postives = 165/262 (62.98%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP--SSDDDRSH 123
           M RGKL+  LI NRKSR STFK+RKNSL+KK+YELSTLCDVR CVLINGP  + D+D S 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 124 SDLDFHTWPTNRSEIQTLIRAYK---INLRQKRKGFDLSDFFSDRKAKIETEILKLRQNL 183
           S ++FHTWP+NRSE++ +I AYK    NL QKRK FDLSD+FSDRK K+ TE+ K R+ +
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNL-QKRKCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 184 QEVVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFS----------------SNS 243
            +++ P+WD++LD LSEQ+LR FM+ LDS+IE    MI F                  N 
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYENV 180

Query: 244 VQMEARDFNPPVD--ELEDF--------NGSEDQPAFNSEDLQSLFFEEDDDIDMEFIMH 295
           VQM      P +   ELE          N  ED+   N E+L+ L  +ED++    ++  
Sbjct: 181 VQMGGDSSTPVLSLVELESTDSLNSPNPNPDEDEIGCNFENLEYLLEDEDEN----YMAL 240

[Close]

BLAST of Tan0014235 vs. ExPASy TrEMBL
Match: A0A6J1F4C8 (agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC111442271 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.2e-47
Identity = 124/261 (47.51%), Postives = 165/261 (63.22%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGP--SSDDDRSH 123
           M RGKL+  LI NRKSR STFK+RKNSL+KK+YELSTLCDVR CVLINGP  + D+D S 
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 124 SDLDFHTWPTNRSEIQTLIRAYK---INLRQKRKGFDLSDFFSDRKAKIETEILKLRQNL 183
           S ++FHTWP+NRSE++ +I AYK    N  QKRK FDLSD+FSDRK K+ TE+ K R+ +
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNF-QKRKCFDLSDYFSDRKRKLVTEMCKHREKV 120

Query: 184 QEVVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFS----------------SNS 243
            +++ P+WD++LD LSEQ+LR FM+ LDS+IE    M+ F                  N 
Sbjct: 121 GKIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMVDFMDADNENLFGMFSCEEYENV 180

Query: 244 VQMEARDFNPPV---------DELEDFNGSEDQPAFNSEDLQSLFFEEDDDIDMEFIMHC 295
           VQM   D + PV         D L   N ++ +   N E+L+ L  +ED++    ++   
Sbjct: 181 VQM-GGDSSTPVPPLVELESPDSLNSPNPNKHEIGCNFENLEFLLEDEDEN----YMALY 240

[Close]

BLAST of Tan0014235 vs. ExPASy TrEMBL
Match: A0A0A0LME6 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G336070 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.5e-37
Identity = 85/161 (52.80%), Postives = 116/161 (72.05%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGRGKL++KLISN KSR +TF KRK SLL+K+YELSTLCDVR+CV+++GP+  +D+  S 
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVVVHGPNQSNDQ--SP 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQK--RKGFDLSDFFSDRKAKIETEILKLRQNLQEV 183
           L  HTWP +  E+  +I +YK N   K  RK F L DFFS+RK K+ET++ KLR+++ E 
Sbjct: 61  LQLHTWPPSADEVNNMIASYKTNCLYKRVRKSFGLIDFFSERKKKVETDMSKLRKDVSEE 120

Query: 184 VRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFSSNS 223
             P+WD++LDHL E +LR  M  LDSKIE     I+ ++ +
Sbjct: 121 RFPSWDERLDHLLEDQLRVLMVELDSKIEIAKKRIEIATEN 159

[Close]

BLAST of Tan0014235 vs. ExPASy TrEMBL
Match: A0A5D3BUZ8 (MADS-box protein SOC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00490 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 6.5e-36
Identity = 85/165 (51.52%), Postives = 113/165 (68.48%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGRGKL++KLISN KSR +TF KRK SLL+K+YELSTLCDVR+CV ++GP+  +D+  S 
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVFVHGPNQSNDQ--SP 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQK--RKGFDLSDFFSDRKAKIETEILKLRQNLQEV 183
           L  HTWP    E+ ++I +YK N   K  RK F L DFFS+RK K+ET++ KLR+++ E 
Sbjct: 61  LQLHTWPPCPDEVNSMIASYKTNCLHKRARKAFGLIDFFSERKKKVETDMSKLRKDVAEA 120

Query: 184 VRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFSSNSVQME 227
               WD++LDHL E +LR  M  LDSKIE     I+  +    +E
Sbjct: 121 RFTKWDERLDHLLEDQLRVLMMELDSKIEIAKKRIEIETECYNVE 163

[Close]

BLAST of Tan0014235 vs. ExPASy TrEMBL
Match: A0A1S3CDG6 (MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499621 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 6.5e-36
Identity = 85/165 (51.52%), Postives = 113/165 (68.48%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGRGKL++KLISN KSR +TF KRK SLL+K+YELSTLCDVR+CV ++GP+  +D+  S 
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVFVHGPNQSNDQ--SP 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQK--RKGFDLSDFFSDRKAKIETEILKLRQNLQEV 183
           L  HTWP    E+ ++I +YK N   K  RK F L DFFS+RK K+ET++ KLR+++ E 
Sbjct: 61  LQLHTWPPCPDEVNSMIASYKTNCLHKRARKAFGLIDFFSERKKKVETDMSKLRKDVAEA 120

Query: 184 VRPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQFSSNSVQME 227
               WD++LDHL E +LR  M  LDSKIE     I+  +    +E
Sbjct: 121 RFTKWDERLDHLLEDQLRVLMMELDSKIEIAKKRIEIETECYNVE 163

[Close]

BLAST of Tan0014235 vs. TAIR 10
Match: AT5G58890.1 (AGAMOUS-like 82 )

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14
Identity = 50/162 (30.86%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 69  LNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSDLDFHT 128
           ++L+ I+N K+R++T+KKRK SL KK+ E STLC V  C+++ GP+   D   S+ +   
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEI-- 65

Query: 129 WPTNRSEIQTLIRAYKINLRQK-RKGFDLSDFFSDRKAKIETEILKLRQNLQEVVRPNWD 188
           WP + ++++ +IR YK  +    RK  ++  F +D       E++  ++  +E    +W+
Sbjct: 66  WPKDETKVRAIIRKYKDTVSTSCRKETNVETFVND--VGKGNEVVTKKRVKRENKYSSWE 125

Query: 189 DQLDHLSEQELRAFMDALDSKIETVTGMIQFSSNSVQMEARD 230
           ++LD  S ++L     A+DSK+       + S   V  +A D
Sbjct: 126 EKLDKCSREQLHGIFCAVDSKLNEAVTRQERSMFRVNHQAMD 163

[Close]

BLAST of Tan0014235 vs. TAIR 10
Match: AT5G55690.1 (MADS-box transcription factor family protein )

HSP 1 Score: 75.5 bits (184), Expect = 9.1e-14
Identity = 47/155 (30.32%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGR  + +  I+N K+R++T+KKRK  L KK+ E STLC V  CV++ GPS   D    +
Sbjct: 1   MGRKMVKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDEMVME 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQK-RKGFDLSDFFSDRKAKIETEILKLRQNLQEVV 183
            +   WP + S+++ ++  Y+        K + + +       K+E   +  +       
Sbjct: 61  PEL--WPKDGSKVREILTKYRDTASSSCTKTYTVQECLEKNNTKVEKPTIATKY------ 120

Query: 184 RPNWDDQLDHLSEQELRAFMDALDSKIETVTGMIQ 218
            P WD +LD  S  +L A   A+++KI+  T   Q
Sbjct: 121 -PTWDKKLDQCSLNDLYAVFMAVENKIQEATNRNQ 146

[Close]

BLAST of Tan0014235 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-10
Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           M R K+ L  ISN  SR +TFKKRK  L+KK +ELSTLC +  C +I  P         D
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSP--------YD 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKI--NLRQKRKGFDLSDFFSDRKAKIETEILKLRQNLQEV 182
            +   WP+N S +Q ++  ++    + Q +K  D   F   R AK    + + R++ +E+
Sbjct: 61  TNPEVWPSN-SGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSREL 111

[Close]

BLAST of Tan0014235 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 62.4 bits (150), Expect = 8.0e-10
Identity = 47/155 (30.32%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGRG++ LK I N+ +R  TF KR+N LLKK+YELS LCD  + ++I             
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG-------- 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQKRKGFDLSDFFSDRKAKIETEILKLRQN---LQE 183
              + + ++ S ++TL R  K N           +  ++  +  + E LKL++    LQ 
Sbjct: 61  -KLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAELSS--QQEYLKLKERYDALQR 120

Query: 184 VVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGM 216
             R    + L  LS +EL +    LDS ++ +  +
Sbjct: 121 TQRNLLGEDLGPLSTKELESLERQLDSSLKQIRAL 144

[Close]

BLAST of Tan0014235 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-09
Identity = 47/155 (30.32%), Postives = 75/155 (48.39%), Query Frame = 0


Query: 64  MGRGKLNLKLISNRKSRMSTFKKRKNSLLKKSYELSTLCDVRMCVLINGPSSDDDRSHSD 123
           MGRG++ LK I N+ +R  TF KR+N LLKK+YELS LCD  + ++I             
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRG-------- 60

Query: 124 LDFHTWPTNRSEIQTLIRAYKINLRQKRKGFDLSDFFSDRKAKIETEILKLRQN---LQE 183
              + + ++ S ++TL R  K N           +  +   +  + E LKL++    LQ 
Sbjct: 61  -KLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSS-QQEYLKLKERYDALQR 120

Query: 184 VVRPNWDDQLDHLSEQELRAFMDALDSKIETVTGM 216
             R    + L  LS +EL +    LDS ++ +  +
Sbjct: 121 TQRNLLGEDLGPLSTKELESLERQLDSSLKQIRAL 145

The following BLAST results are available for this feature:

BLAST of Tan0014235 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIM0	1.5e-13	30.86	Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=...	[more]
Q9FJK3	3.0e-09	35.00	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
P0C5B0	2.5e-08	31.58	MADS-box transcription factor 7 OS=Oryza sativa subsp. indica OX=39946 GN=MADS7 ...	[more]
Q0J466	2.5e-08	31.58	MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS...	[more]
O04067	4.3e-08	30.86	Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba OX=3728 GN=AGL9 PE=2 ...	[more]

BLAST of Tan0014235 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528957.1	6.9e-48	48.47	agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo]	[more]
XP_022983430.1	6.9e-48	48.47	agamous-like MADS-box protein AGL14 [Cucurbita maxima]	[more]
XP_022935361.1	4.5e-47	47.51	agamous-like MADS-box protein AGL14 [Cucurbita moschata]	[more]
KAG6581223.1	3.8e-46	47.35	Agamous-like MADS-box protein AGL82, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_038887059.1	2.5e-42	50.65	agamous-like MADS-box protein AGL82, partial [Benincasa hispida]	[more]

BLAST of Tan0014235 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J5U6	3.3e-48	48.47	agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 ...	[more]
A0A6J1F4C8	2.2e-47	47.51	agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC11144227...	[more]
A0A0A0LME6	3.5e-37	52.80	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G336070 PE...	[more]
A0A5D3BUZ8	6.5e-36	51.52	MADS-box protein SOC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CDG6	6.5e-36	51.52	MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499621 PE=4 SV=1	[more]

BLAST of Tan0014235 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58890.1	1.1e-14	30.86	AGAMOUS-like 82	[more]
AT5G55690.1	9.1e-14	30.32	MADS-box transcription factor family protein	[more]
AT5G48670.1	2.1e-10	35.00	AGAMOUS-like 80	[more]
AT1G24260.1	8.0e-10	30.32	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	3.0e-09	30.32	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 66..86 score: 43.97 coord: 86..101 score: 65.31
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 64..123 e-value: 1.4E-16 score: 71.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 74..114 e-value: 9.1E-16 score: 57.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 64..110 score: 19.104929
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 76..166 e-value: 2.7E-14 score: 55.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 64..116
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 66..246
None	No IPR available	PANTHER	PTHR11945:SF176	AGAMOUS-LIKE MADS-BOX PROTEIN AGL82	coord: 66..246
None	No IPR available	CDD	cd00120	MADS	coord: 65..113 e-value: 1.71563E-19 score: 78.7097

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014235.1	Tan0014235.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding