
Tan0014197 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCCTTTGTCTTCCTCCTCGCGCCACTGTTTTCTTTTTCTTCTTCTTCCCCTTGTCTTCTTTCTCCTTCTGCCAGACATTTTGTCCAACACTTTATGGGCATTGTGTTTAAAATCTTCTGATTCTGACTGTCTGAAGAAGAAGAAGAAGAAGAAGAAGAAAAACAAGGTGGGGTTGTTCCTGTGAAGATCTTTCTCCCAATTTGATGAGATTGTAGCGTTGGTGGGACATGGACGGAGCGGAAATGGAGCTTGAGCGGCGGAGCAAGTTTCTAAATGGGCTTATTCTGAAGAAGAAGGCGGTGGATCAGCAAGAGCAGCGCGATCGTCTTAATGTTCGCGTCAGAGCCTCCGATATGCCGTTTCCTTTGCAGAATCGCGCTTTTAGCTGCGCTCGTGAACTGCTTGATTCGATGTCTGGGAAGCTCGATAGCAAACGCCTCGCTCTCGCTCTTAAAAAGGTAAGGCAAAAAAAATCTCCCCCTGAACCTGAACTAACTCTTGGTTCTGAAATGCGTTTTTACGGTTGCTATTTTCTGACAAGTGCAGCTTAATTATCCAGTTTTCTTTTCGGTTTTGGGTTAGAGAAAGTTTATAGGGATGATTATTTGGCTGTTTTGAGTAGTGTCTGGAATGTGTTTGATGAAATGCCTCTTTGGTATGAACTGAATTTGTTCATGGGATTTTGAGTGTGAGATTTCTGGGATCTCTACTATTTAGGCAGAAAATGATGTGTTTTCTGTTTCATTGCACTTGTTTCAGTTGACTCATGAAAGTACTCTGCTATTTGAAGTGGTCTCTCTGAATTGAATTAACTGCCTCTGTACGCTGTCTATGTGTTTGCCTGATTTGTGCACCTCCAAACTTTGGGATTAGCTTCTCTCATAATTATACTCGGATTCAATAATTTTCATATTCCATATCCCTTAATAACTACTCGAAATAAATTTAAGATGTTTTTCTCTACATCTACCTATAAAAAAAATTATCAACCACATTACAGTAGTTTCATCTAATAATTTTTTCATCTGTAGTGGGAATTTGTTGCCCACCATTAATACCATCATAGTTGATAGGCATCCTCTACTGACACTTGCCAGCTGCCTTATGTCCACTGATTGTTCTCTGGTTCTCCAGAAAGCTTGTCGGAACAAGGAGATTGTAGTCGTTGTCAAATTAATACTAGATGTTCTATTTACAGTCGCTAGATTTAAGAGGGGGCTATTTTTTTCTTCCCTAGCTAGCTGGCTAAATTTTCCCCTGAATTTGCCATTTTGCTACTTCATATGTAGTTATGTGTCTCTGTGGTATGTGTTTTACTTTTATATGGTCCTTCAAAAAATCAGCTTTTTTCTATAATGGGTTTTAATTCTTTCTGGTCCCCTATCTCTGTCCTCTCTTCCTAGCTAAGAAAAATGAGGCAATGAGCTATTTGAAAATAGTCTTTTGGGTTGGAAGTTGTGTTTAATTGAGTGTTAAAAAATAGTTTTGATCCATGAAGTGACAATTTAGTCGTGAATTTTAGTTTTTGAGGATTTAGTCATTGCATTTGTTATAATTTAATCCTTATACTTTAAAATTTGTGACCATTGAACTCTTCTCGTAAAAAATATTGTTAAGATTTAATGAAAATTCTTATCGATGTAGATTGATTAATTGTCTTTTTGGATCAAATGTATTTGTAGAAAGATTAAGTTGTTACATGATGAAAAAATGACATTTAATTTTGAAGAAAAATTCTCATGGTATGAATTAAATTGTTATAAATTTAAAAATGTAGGAACTAAATTATGACATGTTAAAGTTCATGGACTAAATTGTTACAAATTTGAAAGTATTAAGAACTAAATTGAAGGATTACTTTCATAGAAATTGAGGGACCAAAAATGAAGTCAATATTGAGTATATTGAAATCGCTACTCAAAAATTCAAAATTTTAGAAACAACGACCTCCATTTTTTTTATGGGTGATTTGTGAGAACATAACTAAAAGTTTTTTCAAAAAAAAAAAAAAACTCTGAAAAATATGTCTCGGATCATTTTTTTTTTCAAAATTGTTCTAAAAAATAAAGAAGAAAAAACTGTGTAGATCAACACAATTTAACTGCCCCAAATTTTTCAACATTGAGCCTATGAGTAGTGGAATGGAGGGCATTTTCTTTCTTGAACCTGCTTTTGTTTAAGAGTAATGATAGGCAAAGAGTGTATTTGAAATCTTTGTTGTGAAATATCCAAAGTTCTCACACCATTCTTGTGGAAAACAAACCATATGAAAACATAATCATTTTCTTGGCTTGGCTTGGCCAGAGCCTATATTCATGACAACATTATAATTATTCATAAGTCTGAAACCATCATATTCTTGTGCATTGTTCAAGTTGGGACCTTTTTGTTTTGAGTTAGCCTCCCTTCTTGATGATTTAATATTTGAAGTCTATTTTGATGGTCTTTTGAGGCAGCGTAATTCATCAACCTGAATGTAGTTTAATTGGTTGGAGCACTAGTAACTTTCCTAAAAGTTAGAGGTTAGAATCATTACTCACTTTTTATTGTACTACAAAATATGCTTTTAACCTACTTATCAAAATTTTTGAGCTGATAAAACAAGATATATTGACAAATTTTAAATTTTTTTTTTTTTTTGAGTTATCCACAGTTTTTAAGTAGCTTTATAATTCACTTCAATTTCATTCATTAGTATTGAGATAAGAATAACTTTAAATGTTGTAGATCAAACAATTGCTCGTGATACTAGTCGAGATGCGCGTATATAAGTGCCTTAATACCACAAAAAGTTAAGAATAAACGAGATAAAGTTTGATGCTAATGAGGTTGTACTGGTTTTTCAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTAACACATTCTTTGGGTGGCTTCTTGTATTTTTCAATAGACAAAGTTTACATTCTTCTCTTCAAAACGGCAGTCGAACCCCTGTCACGTGCAACATCGTTAAAAGATTGAGTAAACAAGGATCGAACAGGCATCGATTTGATCGTAAAATCGAACAGCTGCTAAAGTCATGAACAAGAACAACCAGGTTCAGTCATACTATTCTGGTTGGTTGTATCATTGACTTTATCTTGTTTAAGAAACAGAGTGTGCAGGCTTTTGCTCTAATGTGAGTTGTGCATTAATTTACTGGCTGATTATGAAATTTTGTTGTGTGCAGTCCAATAGCAAGGATTTCTGATGTTATAAGATTTTATGTTTCTGC CCTCCTTTGTCTTCCTCCTCGCGCCACTGTTTTCTTTTTCTTCTTCTTCCCCTTGTCTTCTTTCTCCTTCTGCCAGACATTTTGTCCAACACTTTATGGGCATTGTGTTTAAAATCTTCTGATTCTGACTGTCTGAAGAAGAAGAAGAAGAAGAAGAAGAAAAACAAGGTGGGGTTGTTCCTGTGAAGATCTTTCTCCCAATTTGATGAGATTGTAGCGTTGGTGGGACATGGACGGAGCGGAAATGGAGCTTGAGCGGCGGAGCAAGTTTCTAAATGGGCTTATTCTGAAGAAGAAGGCGGTGGATCAGCAAGAGCAGCGCGATCGTCTTAATGTTCGCGTCAGAGCCTCCGATATGCCGTTTCCTTTGCAGAATCGCGCTTTTAGCTGCGCTCGTGAACTGCTTGATTCGATGTCTGGGAAGCTCGATAGCAAACGCCTCGCTCTCGCTCTTAAAAAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTAACACATTCTTTGGGTGGCTTCTTGTATTTTTCAATAGACAAAGTTTACATTCTTCTCTTCAAAACGGCAGTCGAACCCCTGTCACGTGCAACATCGTTAAAAGATTGAGTAAACAAGGATCGAACAGGCATCGATTTGATCGTAAAATCGAACAGCTGCTAAAGTCATGAACAAGAACAACCAGGTTCAGTCATACTATTCTGGTTGGTTGTATCATTGACTTTATCTTGTTTAAGAAACAGAGTGTGCAGGCTTTTGCTCTAATGTGAGTTGTGCATTAATTTACTGGCTGATTATGAAATTTTGTTGTGTGCAGTCCAATAGCAAGGATTTCTGATGTTATAAGATTTTATGTTTCTGC ATGGACGGAGCGGAAATGGAGCTTGAGCGGCGGAGCAAGTTTCTAAATGGGCTTATTCTGAAGAAGAAGGCGGTGGATCAGCAAGAGCAGCGCGATCGTCTTAATGTTCGCGTCAGAGCCTCCGATATGCCGTTTCCTTTGCAGAATCGCGCTTTTAGCTGCGCTCGTGAACTGCTTGATTCGATGTCTGGGAAGCTCGATAGCAAACGCCTCGCTCTCGCTCTTAAAAAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTAACACATTCTTTGGGTGGCTTCTTGTATTTTTCAATAGACAAAGTTTACATTCTTCTCTTCAAAACGGCAGTCGAACCCCTGTCACGTGCAACATCGTTAAAAGATTGA MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD Homology
BLAST of Tan0014197 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14 Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.7e-14 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 8.0e-14 Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.0e-13 Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy Swiss-Prot
Match: O96860 (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.0e-13 Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 0
BLAST of Tan0014197 vs. NCBI nr
Match: XP_038906759.1 (dynein light chain LC6, flagellar outer arm [Benincasa hispida]) HSP 1 Score: 254.6 bits (649), Expect = 4.7e-64 Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0
BLAST of Tan0014197 vs. NCBI nr
Match: XP_022146325.1 (dynein light chain LC6, flagellar outer arm [Momordica charantia]) HSP 1 Score: 252.3 bits (643), Expect = 2.4e-63 Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 0
BLAST of Tan0014197 vs. NCBI nr
Match: XP_004150121.1 (dynein light chain 1, cytoplasmic [Cucumis sativus] >XP_008467114.1 PREDICTED: dynein light chain 1, cytoplasmic [Cucumis melo] >KGN51478.1 hypothetical protein Csa_008341 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 4.0e-63 Identity = 128/134 (95.52%), Postives = 129/134 (96.27%), Query Frame = 0
BLAST of Tan0014197 vs. NCBI nr
Match: XP_023551552.1 (dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]) HSP 1 Score: 248.8 bits (634), Expect = 2.6e-62 Identity = 126/134 (94.03%), Postives = 128/134 (95.52%), Query Frame = 0
BLAST of Tan0014197 vs. NCBI nr
Match: XP_022939677.1 (dynein light chain LC6, flagellar outer arm [Cucurbita moschata] >KAG6579264.1 hypothetical protein SDJN03_23712, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016780.1 hypothetical protein SDJN02_21890 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 247.7 bits (631), Expect = 5.8e-62 Identity = 125/134 (93.28%), Postives = 128/134 (95.52%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy TrEMBL
Match: A0A6J1CWZ8 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111015562 PE=3 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63 Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy TrEMBL
Match: A0A0A0KPF8 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_5G567290 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63 Identity = 128/134 (95.52%), Postives = 129/134 (96.27%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy TrEMBL
Match: A0A1S3CSY6 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103504546 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63 Identity = 128/134 (95.52%), Postives = 129/134 (96.27%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy TrEMBL
Match: A0A6J1FHG9 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111445494 PE=3 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.8e-62 Identity = 125/134 (93.28%), Postives = 128/134 (95.52%), Query Frame = 0
BLAST of Tan0014197 vs. ExPASy TrEMBL
Match: A0A6J1I7W2 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472109 PE=3 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 4.8e-62 Identity = 124/134 (92.54%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of Tan0014197 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 201.8 bits (512), Expect = 3.4e-52 Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of Tan0014197 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28 Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of Tan0014197 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 ) HSP 1 Score: 77.4 bits (189), Expect = 9.7e-15 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of Tan0014197 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 74.7 bits (182), Expect = 6.3e-14 Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Tan0014197 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 72.0 bits (175), Expect = 4.1e-13 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|