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Tan0014177 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCATGCTCTGCTATAAATAGCCCTGCCAAACCCATCATCCATCTCCATGCACAAACCAATTTCAAAGCTTTTCAATTCAATTCCCTAAGCCAAAAACATGGATTCCAAATCCACCCACACCCACATCGAAAAAACTTCCGAAATCACCGACTGCAGCGACGCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGACGGCCGGACCGACGCGGTGGCGAAGTTCCTGGCCGGCGACCTGGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCAAGCCACGGCGAGTTTCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCGGAAGGGTGGGAAGGGGCTCAGGTGTATTGGGTTCATGTTTGGACTTTGAAAGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCAGCGTGGGAGGAGGTCCGCCATGATGGGCTGACGCTGTGGCGGAGCCACCCTCGAGATCTGTTTCACCGCTCGTTGCCGGCGATTGTGCTCGCGCTGTAG ATCATGCTCTGCTATAAATAGCCCTGCCAAACCCATCATCCATCTCCATGCACAAACCAATTTCAAAGCTTTTCAATTCAATTCCCTAAGCCAAAAACATGGATTCCAAATCCACCCACACCCACATCGAAAAAACTTCCGAAATCACCGACTGCAGCGACGCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGACGGCCGGACCGACGCGGTGGCGAAGTTCCTGGCCGGCGACCTGGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCAAGCCACGGCGAGTTTCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCGGAAGGGTGGGAAGGGGCTCAGGTGTATTGGGTTCATGTTTGGACTTTGAAAGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCAGCGTGGGAGGAGGTCCGCCATGATGGGCTGACGCTGTGGCGGAGCCACCCTCGAGATCTGTTTCACCGCTCGTTGCCGGCGATTGTGCTCGCGCTGTAG ATGGATTCCAAATCCACCCACACCCACATCGAAAAAACTTCCGAAATCACCGACTGCAGCGACGCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGACGGCCGGACCGACGCGGTGGCGAAGTTCCTGGCCGGCGACCTGGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCAAGCCACGGCGAGTTTCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCGGAAGGGTGGGAAGGGGCTCAGGTGTATTGGGTTCATGTTTGGACTTTGAAAGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCAGCGTGGGAGGAGGTCCGCCATGATGGGCTGACGCTGTGGCGGAGCCACCCTCGAGATCTGTTTCACCGCTCGTTGCCGGCGATTGTGCTCGCGCTGTAG MDSKSTHTHIEKTSEITDCSDAEHQNRATAEALYKSLADGRTDAVAKFLAGDLEWWFHGPPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQVYWVHVWTLKDGLITQFREYFNTWLVVTDLRPAAWEEVRHDGLTLWRSHPRDLFHRSLPAIVLAL Homology
BLAST of Tan0014177 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.8e-10 Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of Tan0014177 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.0e-10 Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 0
BLAST of Tan0014177 vs. NCBI nr
Match: XP_022978301.1 (wound-induced protein 1 [Cucurbita maxima]) HSP 1 Score: 317.0 bits (811), Expect = 9.7e-83 Identity = 149/168 (88.69%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Tan0014177 vs. NCBI nr
Match: XP_023544894.1 (wound-induced protein 1 [Cucurbita pepo subsp. pepo] >KAG6603551.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033740.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81 Identity = 147/168 (87.50%), Postives = 155/168 (92.26%), Query Frame = 0
BLAST of Tan0014177 vs. NCBI nr
Match: XP_038883007.1 (wound-induced protein 1 [Benincasa hispida]) HSP 1 Score: 311.2 bits (796), Expect = 5.3e-81 Identity = 152/169 (89.94%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of Tan0014177 vs. NCBI nr
Match: XP_022949814.1 (wound-induced protein 1 [Cucurbita moschata]) HSP 1 Score: 310.5 bits (794), Expect = 9.1e-81 Identity = 145/168 (86.31%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of Tan0014177 vs. NCBI nr
Match: XP_008464249.1 (PREDICTED: wound-induced protein 1 [Cucumis melo] >KAA0065331.1 wound-induced protein 1 [Cucumis melo var. makuwa] >TYK10970.1 wound-induced protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77 Identity = 144/169 (85.21%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of Tan0014177 vs. ExPASy TrEMBL
Match: A0A6J1IMA8 (wound-induced protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478330 PE=4 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 4.7e-83 Identity = 149/168 (88.69%), Postives = 156/168 (92.86%), Query Frame = 0
BLAST of Tan0014177 vs. ExPASy TrEMBL
Match: A0A6J1GE13 (wound-induced protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453098 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81 Identity = 145/168 (86.31%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of Tan0014177 vs. ExPASy TrEMBL
Match: A0A5D3CHY0 (Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00580 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 6.0e-78 Identity = 144/169 (85.21%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of Tan0014177 vs. ExPASy TrEMBL
Match: A0A1S3CLI3 (wound-induced protein 1 OS=Cucumis melo OX=3656 GN=LOC103502179 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 6.0e-78 Identity = 144/169 (85.21%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of Tan0014177 vs. ExPASy TrEMBL
Match: A0A0A0L1G7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G325520 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 6.6e-77 Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of Tan0014177 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 171.0 bits (432), Expect = 8.0e-43 Identity = 83/159 (52.20%), Postives = 106/159 (66.67%), Query Frame = 0
BLAST of Tan0014177 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 ) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11 Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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