Tan0014165 (gene) Snake gourd v1

Overview


Name	Tan0014165
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-type domain-containing protein
Location	LG07: 12722276 .. 12725300 (+)
RNA-Seq Expression	Tan0014165
Synteny	Tan0014165

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAGTTCTGATTTTCTTTACGAAGAACTCTTCTGGATCGCCAGTAGAGAATATTCTCGAGCATCCCTTTTCTTCTCTCTTTTGGTTCAGAATATTTCTTCAGCATCTCCTTTCTTTTCAAGTTTTGATTTCTGCTGAAGAAGAACTGTTCTGGGTTCTGTGTAATTTAACTATTTAGAGCGAGAAAGATCGGAGGAGGAACCCTCGTGTACTCGCCATGACTTCTTCGGGAATCTCTGTTGAAATCGCCCAATTGTCAGATGCCGTTCAAGAACTGAAAGTTTGCGACCAGGTTTTATTATATCTCCTCAATTTCGAAGTTGATCTACTTGTTTCACGCACTTTCTTTTATCCACGAAAATCTGGGCGTACAACTTGGCGCGAGAAATGGTTGTCTCCGATTTGTGTTGAGAGTTCTAATTGGAAGTATTGTGTTCTGAAATCTGAGATCGTTGATTTAGTCTTGTTTTCTTTCGTTTTCAAGATTTGCTCTCATCGGGGGCTGATTAAAAGTCGGAGATCGTTGGTTGAGTCTAGTTTTATTTCATTTTCAAGATTTTTGCCCATCGAAAAGCTTATTTTTGCTTTTAGTATCTAGGAAGTACATGGTTTAAACGAATTGAATGGATGCGCGTGCTTGCTTGTTTCACCCTGAGGAATTATAGGAGGTAGAAGCTAATGTTAATATTCATTGATTTCCGTTATACGATTGCCAGTAATTGGATTGGTGTTGTTTTTTACTTGTGAATTTGGTTGCCTGCCCATGTCTCTTAATTTTCCAAGGAAAATTTTCCTCTCTTGCAGTTAAGAGTTGCATATTTATGGGTCTATTGAAGTGTCTCTTTTCAAACATTGGTTATTTGCGTATGCACCTTTTGACTAACTTTCTGAACTTCTTTGTTCAGATGGAAATGGGAAAGAAGGCAGAGATTCAAGGAACGGGGCATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTAAATAAGATTGCTCTTCAAGAAACTGCCTTAGTGAGAGGTTGCGAGCATGCCTATTGGTATGTTCTAATTGATTAATTTTCCATCTATTTATTAATATTTAATAGGTTTTTGTAGCATGACTTTCATATGCTTCAATACATTAGGCAATTGTTGATCTGTTCCTTTCCTTTATTTGTATGGGAATCTTTTTTGCAGTCAAATGTTGACCTTCTATAGATGGTTCAATTCTAATGCTGCTTTTATCATATATATCTCATTTCGTTGTGGTTCTATGCTTGTATTGGAGATGGAGTTTTACATTTTTGCAAACGTATTCCTCGGAGTCTCCTAAACTTAATAGGAGAAAATTCACTGTATCCATATTGCCTTTGGTGCAATGTTTCTAATTGTACTTCAGGTTGCTGGGATTTAATAGAAGAGGTATGCTGTTTTAGATTTATAACCGAAGGATCTTGGAGATAGGGAAATGTATGGTACAGAGTCTGATGGTTAATCTATAATTTGATTTTCATTGAAAAATAAAAAATTTAGAAACTAGCAGAACTCTTTGTTAAGTCTCGACTTATTTCGTTTATTAATTATTGAAGTTAAAATGCTTGCTTGGTGAGACTTGGATAGAAATCTGTCGTACTCGGAAAGCACTGTCTATGTGTGTCGGATACTTATTAAATTGGACACTATCAAACACTGTGTTGAACATTTATTAAGTACAATAGACATGAGTCAGACACATATTGAACAATTATTAGCCATTTGAACACAAGTGTTGAAACATATATCGAAAAAGGCTTGGATGTTTAGAAAATGACATGTCACCATGTCTATGCCAGTGTCTATGCTTCTTTGTTGTAAGCCAGTTACCCTTTCAGGACCCCCAAATTATGTCATTACATACTTGATGCATTTCATATCTGTTGAAAAGTTTAATTTTATGTTTTTATACTTGCTGCGGGGAACATTTTCCTACTGCTATTGCAGCGAATACTTTATGTAGTTCTCACTTTTACCTTGGAAAGTAATAATTAAACCAAACAAAAATTGAAGTGGCATAATGGAATTGCCAAATGTATCAACATTTGAGGATTATCTTCTTTTAATTGATTCATTCTTTTACTTTCATGAAGTGCAACTTGCATCCTTCGATGGGCCTCATATACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTGCATCGTTCTCTTGATGGGAGGTATGTCCAGTCATCATTCTATGGTCCTTTTATGGTTTAGAGTTTGAACTCGGTGTGGCCTAGTAGTATCTTTTTAAATTACTGTTCTTACTTTTTTATCCATATATTGCCTGCACATTGGTAGCATCCATGACTATATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCATGGTATAAACCACTGATCGTTGAAGATCGGGAGGAAACCTATGATGATCTTGAGGAGTACTATCCTTACGAGGATGACGATGAAGAGTTTGAGGAAGCTTACTTGGGTGCATCGCCCAGTCTCCGAATCGGAAATCGGAGGTGGGGAGACAATGGATATGTGAGGGCAGGTCGACAAGAAGCACGGCCAGTTTTTAGGCCAACTGTTCCAGAGTTTGCAGGAGCTAGCTCATCACGCGAGCCTATAAAGAAAGATGCTTCCAAAGATAAAACAGGTCGGCGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCTGCAGCAGCTAAACATCAGGAACATTTAGCTAGGTTCGGCCGGAAGTGATTTTATGTCAAGTTCCTGTATATAATAAGCCTTGCGCTTTGACCCTCTGTACTGTACAGTTCTAAGATTCAATATACTTTCCTAGTCGATGTACCTTACCTTACCTGAGCCTGGTAGGCTCCCAATGAAATCTAAGATGGAGATCATACTTACAAGGTGTAAATGAGACACAACATTGAATTCTTTGTATAAACATTGGATCTCAGAATCAATCATAAAAGAATTGTTATGTTCGGTTTTTCTTTTAAAAGACGCATTAGAATTTAATCA

mRNA sequence

CACAAGTTCTGATTTTCTTTACGAAGAACTCTTCTGGATCGCCAGTAGAGAATATTCTCGAGCATCCCTTTTCTTCTCTCTTTTGGTTCAGAATATTTCTTCAGCATCTCCTTTCTTTTCAAGTTTTGATTTCTGCTGAAGAAGAACTGTTCTGGGTTCTGTGTAATTTAACTATTTAGAGCGAGAAAGATCGGAGGAGGAACCCTCGTGTACTCGCCATGACTTCTTCGGGAATCTCTGTTGAAATCGCCCAATTGTCAGATGCCGTTCAAGAACTGAAAGTTTGCGACCAGATGGAAATGGGAAAGAAGGCAGAGATTCAAGGAACGGGGCATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTAAATAAGATTGCTCTTCAAGAAACTGCCTTAGTGAGAGGTTGCGAGCATGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATATACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTGCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCATGGTATAAACCACTGATCGTTGAAGATCGGGAGGAAACCTATGATGATCTTGAGGAGTACTATCCTTACGAGGATGACGATGAAGAGTTTGAGGAAGCTTACTTGGGTGCATCGCCCAGTCTCCGAATCGGAAATCGGAGGTGGGGAGACAATGGATATGTGAGGGCAGGTCGACAAGAAGCACGGCCAGTTTTTAGGCCAACTGTTCCAGAGTTTGCAGGAGCTAGCTCATCACGCGAGCCTATAAAGAAAGATGCTTCCAAAGATAAAACAGGTCGGCGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCTGCAGCAGCTAAACATCAGGAACATTTAGCTAGGTTCGGCCGGAAGTGATTTTATGTCAAGTTCCTGTATATAATAAGCCTTGCGCTTTGACCCTCTGTACTGTACAGTTCTAAGATTCAATATACTTTCCTAGTCGATGTACCTTACCTTACCTGAGCCTGGTAGGCTCCCAATGAAATCTAAGATGGAGATCATACTTACAAGGTGTAAATGAGACACAACATTGAATTCTTTGTATAAACATTGGATCTCAGAATCAATCATAAAAGAATTGTTATGTTCGGTTTTTCTTTTAAAAGACGCATTAGAATTTAATCA

Coding sequence (CDS)

ATGACTTCTTCGGGAATCTCTGTTGAAATCGCCCAATTGTCAGATGCCGTTCAAGAACTGAAAGTTTGCGACCAGATGGAAATGGGAAAGAAGGCAGAGATTCAAGGAACGGGGCATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTAAATAAGATTGCTCTTCAAGAAACTGCCTTAGTGAGAGGTTGCGAGCATGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATATACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTGCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCATGGTATAAACCACTGATCGTTGAAGATCGGGAGGAAACCTATGATGATCTTGAGGAGTACTATCCTTACGAGGATGACGATGAAGAGTTTGAGGAAGCTTACTTGGGTGCATCGCCCAGTCTCCGAATCGGAAATCGGAGGTGGGGAGACAATGGATATGTGAGGGCAGGTCGACAAGAAGCACGGCCAGTTTTTAGGCCAACTGTTCCAGAGTTTGCAGGAGCTAGCTCATCACGCGAGCCTATAAAGAAAGATGCTTCCAAAGATAAAACAGGTCGGCGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCTGCAGCAGCTAAACATCAGGAACATTTAGCTAGGTTCGGCCGGAAGTGA

Protein sequence

MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQEARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

Homology

[Close]

BLAST of Tan0014165 vs. ExPASy Swiss-Prot
Match: Q99590 (Protein SCAF11 OS=Homo sapiens OX=9606 GN=SCAF11 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-05
Identity = 21/60 (35.00%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 46  CAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSI 105
           C ICLN +  +E      C H +C TCIL+WA      +CP  + PF+ +    +L+G +
Sbjct: 41  CPICLNCLLEKEVGFPESCNHVFCMTCILKWAE--TLASCPIDRKPFQAVFKFSALEGYV 98

[Close]

BLAST of Tan0014165 vs. NCBI nr
Match: XP_022153003.1 (uncharacterized protein LOC111020607 [Momordica charantia])

HSP 1 Score: 449.1 bits (1154), Expect = 2.4e-122
Identity = 219/242 (90.50%), Postives = 230/242 (95.04%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           MTSSGIS+E A++SDAVQEL++CDQ+++GKK EIQGTGHGSHDGACAICLNKIALQETAL
Sbjct: 1   MTSSGISIEGAEMSDAVQELEICDQVKIGKKVEIQGTGHGSHDGACAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDG IHDYMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCVTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGGIHDYMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY PL+VEDREETYDD EEYYPYEDDDEE EE YLGAS SLRIGNRRWGDNGYVRAGRQ
Sbjct: 121 SWYIPLVVEDREETYDDPEEYYPYEDDDEELEEDYLGASSSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARP+FRP+VPEFA ASSSREP KKDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 
Sbjct: 181 EARPIFRPSVPEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARL 240

Query: 241 GR 243
           GR
Sbjct: 241 GR 242

[Close]

BLAST of Tan0014165 vs. NCBI nr
Match: XP_022995136.1 (uncharacterized protein LOC111490767 [Cucurbita maxima])

HSP 1 Score: 438.7 bits (1127), Expect = 3.2e-119
Identity = 217/243 (89.30%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           M SSGIS E A+LSDAVQ L+VC+Q+EMGKK EI GTGHGSHDG CAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY PLIVEDREETY+D +EYYPYEDDDEEFEEAYLGAS SLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYVPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV R TVP  AGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Tan0014165 vs. NCBI nr
Match: KAG6605938.1 (hypothetical protein SDJN03_03255, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035883.1 hypothetical protein SDJN02_02682 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 438.3 bits (1126), Expect = 4.2e-119
Identity = 217/243 (89.30%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           M SSGIS E A+LSDAVQ L+VC+Q+EMGKK EIQGTGHGSHDG CAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY PLIVEDREETY+D +EYYPYEDDDEEFEEAYLGAS SLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV R TVP  AGASSSREP KKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Tan0014165 vs. NCBI nr
Match: XP_023533579.1 (uncharacterized protein LOC111795401 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.0 bits (1125), Expect = 5.5e-119
Identity = 217/243 (89.30%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           M SSGIS E A+LSDAVQ L+VC+Q+EMGKK EIQGTGHGSHDG CAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY PLIVEDREETY+D +EYYPYEDDDEEFEEAYLGAS SLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV R TVP  AGASSSREPIKKD SKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPIKKDDSKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Tan0014165 vs. NCBI nr
Match: XP_022943783.1 (uncharacterized protein LOC111448431 [Cucurbita moschata])

HSP 1 Score: 437.6 bits (1124), Expect = 7.2e-119
Identity = 218/241 (90.46%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           MTSSGIS++ A+LSDAVQ+LKVCDQ+EM KK EIQGTGHGSHDGACAICLNKI+L ETAL
Sbjct: 1   MTSSGISLKSAELSDAVQDLKVCDQVEMWKKLEIQGTGHGSHDGACAICLNKISLPETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY+PLIV+DREETYDD EEYYPYED DEE EEAYLGASPSLRIGNRRWGDNGYVRAGRQ
Sbjct: 121 SWYEPLIVKDREETYDDPEEYYPYEDQDEELEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV R   PEF+GASSSREP  KDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVLR---PEFSGASSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 238

Query: 241 G 242
           G
Sbjct: 241 G 238

[Close]

BLAST of Tan0014165 vs. ExPASy TrEMBL
Match: A0A6J1DGD3 (uncharacterized protein LOC111020607 OS=Momordica charantia OX=3673 GN=LOC111020607 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122
Identity = 219/242 (90.50%), Postives = 230/242 (95.04%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           MTSSGIS+E A++SDAVQEL++CDQ+++GKK EIQGTGHGSHDGACAICLNKIALQETAL
Sbjct: 1   MTSSGISIEGAEMSDAVQELEICDQVKIGKKVEIQGTGHGSHDGACAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDG IHDYMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCVTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGGIHDYMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY PL+VEDREETYDD EEYYPYEDDDEE EE YLGAS SLRIGNRRWGDNGYVRAGRQ
Sbjct: 121 SWYIPLVVEDREETYDDPEEYYPYEDDDEELEEDYLGASSSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARP+FRP+VPEFA ASSSREP KKDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 
Sbjct: 181 EARPIFRPSVPEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARL 240

Query: 241 GR 243
           GR
Sbjct: 241 GR 242

[Close]

BLAST of Tan0014165 vs. ExPASy TrEMBL
Match: A0A6J1K158 (uncharacterized protein LOC111490767 OS=Cucurbita maxima OX=3661 GN=LOC111490767 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.6e-119
Identity = 217/243 (89.30%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           M SSGIS E A+LSDAVQ L+VC+Q+EMGKK EI GTGHGSHDG CAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY PLIVEDREETY+D +EYYPYEDDDEEFEEAYLGAS SLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYVPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV R TVP  AGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Tan0014165 vs. ExPASy TrEMBL
Match: A0A6J1FXD4 (uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC111448431 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.5e-119
Identity = 218/241 (90.46%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           MTSSGIS++ A+LSDAVQ+LKVCDQ+EM KK EIQGTGHGSHDGACAICLNKI+L ETAL
Sbjct: 1   MTSSGISLKSAELSDAVQDLKVCDQVEMWKKLEIQGTGHGSHDGACAICLNKISLPETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY+PLIV+DREETYDD EEYYPYED DEE EEAYLGASPSLRIGNRRWGDNGYVRAGRQ
Sbjct: 121 SWYEPLIVKDREETYDDPEEYYPYEDQDEELEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV R   PEF+GASSSREP  KDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVLR---PEFSGASSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 238

Query: 241 G 242
           G
Sbjct: 241 G 238

[Close]

BLAST of Tan0014165 vs. ExPASy TrEMBL
Match: A0A6J1H396 (uncharacterized protein LOC111459609 OS=Cucurbita moschata OX=3662 GN=LOC111459609 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.7e-118
Identity = 216/243 (88.89%), Postives = 225/243 (92.59%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           M SSGIS E A+LSDAVQ L+VC+Q+EMGKK EIQGTGHGSHDG CAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY PLIVEDREETY+D +EYYPYEDDDEEFEEAYLGAS SLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV R TVP  AGASSSREP KKDASKDKTGRRAKRALKREAADKAAAAKHQE LARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQERLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Tan0014165 vs. ExPASy TrEMBL
Match: A0A6J1JFP2 (uncharacterized protein LOC111484597 OS=Cucurbita maxima OX=3661 GN=LOC111484597 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.0e-114
Identity = 213/241 (88.38%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           MTSSGIS++ A+LSDAVQ+LKVCDQ EM KK E+Q TGHGSH G+CAICLNKI+L ETAL
Sbjct: 1   MTSSGISLKSAELSDAVQDLKVCDQEEMWKKLEMQRTGHGSH-GSCAICLNKISLPETAL 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREETYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180
           SWY+PLIV+DREETYDD EEYYPYED DEE EEAYLG SPSLRIGNRRWGDNGYVRAGRQ
Sbjct: 121 SWYEPLIVKDREETYDDPEEYYPYEDQDEELEEAYLGDSPSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVFRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV R   PEF+GASSSREP  KDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVLR---PEFSGASSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 237

Query: 241 G 242
           G
Sbjct: 241 G 237

[Close]

BLAST of Tan0014165 vs. TAIR 10
Match: AT5G19430.1 (RING/U-box superfamily protein )

HSP 1 Score: 255.4 bits (651), Expect = 4.7e-68
Identity = 141/256 (55.08%), Postives = 179/256 (69.92%), Query Frame = 0


Query: 1   MTSSGISVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETAL 60
           M+S    V   Q+ D +Q+L + +Q +   + EI     G+H G CAICL++I LQETA+
Sbjct: 1   MSSVTEIVSEQQVIDGIQDLALQNQDKKKIQEEIHEPSFGNHGGCCAICLSEIPLQETAM 60

Query: 61  VRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120
           V+GCEH YC TCILRWAS  + PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRA
Sbjct: 61  VKGCEHTYCVTCILRWASCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRA 120

Query: 121 SWYKPLIVEDREE----TYDDLEEYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVR 180
           SW+ PL V ++       +DD +  Y YED+D++ +E YL  S SLRIGNRRWG NG+VR
Sbjct: 121 SWFVPLDVVEQASYSHGYHDDFDIPYDYEDEDDDLDEFYLHGS-SLRIGNRRWGGNGFVR 180

Query: 181 AGRQEARPVFR-----PTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKA--- 240
           +GRQEARPV R      +    +G+SSS    K+  + + TGRRAKRA+KREAA+KA   
Sbjct: 181 SGRQEARPVQRYSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEV 240

Query: 241 -AAAKHQEHLARFGRK 244
            AAAKH+ HL R GRK
Sbjct: 241 TAAAKHEAHLVRLGRK 255

[Close]

BLAST of Tan0014165 vs. TAIR 10
Match: AT5G19430.2 (RING/U-box superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.4e-66
Identity = 133/224 (59.38%), Postives = 163/224 (72.77%), Query Frame = 0


Query: 33  EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPF 92
           EI     G+H G CAICL++I LQETA+V+GCEH YC TCILRWAS  + PTCPQCKHPF
Sbjct: 18  EIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHTYCVTCILRWASCKESPTCPQCKHPF 77

Query: 93  EFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEDREE----TYDDLEEYYPYEDDD 152
           +FL VHR+LDGSI D++FEESVCLLLRASW+ PL V ++       +DD +  Y YED+D
Sbjct: 78  DFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLDVVEQASYSHGYHDDFDIPYDYEDED 137

Query: 153 EEFEEAYLGASPSLRIGNRRWGDNGYVRAGRQEARPVFR-----PTVPEFAGASSSREPI 212
           ++ +E YL  S SLRIGNRRWG NG+VR+GRQEARPV R      +    +G+SSS    
Sbjct: 138 DDLDEFYLHGS-SLRIGNRRWGGNGFVRSGRQEARPVQRYSGSGSSSSSSSGSSSSEPKD 197

Query: 213 KKDASKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK 244
           K+  + + TGRRAKRA+KREAA+KA    AAAKH+ HL R GRK
Sbjct: 198 KQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHEAHLVRLGRK 240

[Close]

BLAST of Tan0014165 vs. TAIR 10
Match: AT5G12310.1 (RING/U-box superfamily protein )

HSP 1 Score: 240.4 bits (612), Expect = 1.6e-63
Identity = 139/253 (54.94%), Postives = 168/253 (66.40%), Query Frame = 0


Query: 7   SVEIAQLSDAVQELKVCDQMEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEH 66
           S++I      V  L + DQ E            G+H G CAICL+ I LQETA+V+GCEH
Sbjct: 4   SIQIVVEEKQVDVLPLQDQDEKKTPQVFNELSFGNHGGCCAICLDTIPLQETAMVKGCEH 63

Query: 67  AYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPL 126
           AYC TCILRWASY +KPTCPQCK PF+FL VHR+LDGS+ D+MFEESVCLLLRASW++PL
Sbjct: 64  AYCVTCILRWASYKEKPTCPQCKLPFDFLNVHRALDGSVEDFMFEESVCLLLRASWFQPL 123

Query: 127 IVEDREETYDDLE-------EYYPYEDDDEEFEEAYLGASPSLRIGNRRWGDNGYVRAGR 186
              +R    D+         EY   ++DD++ +E Y+  S SLR+GNRRWGDNG+VRAGR
Sbjct: 124 EAVERVSDNDNFNYDFDIPPEYEEEDEDDDDLDEFYMQGS-SLRLGNRRWGDNGFVRAGR 183

Query: 187 QEARPVFRPTVPEFA-----GASSSREPIKKDASKDKTGRRAKRALKREAADKA----AA 244
           QEARPV        A      +SSS EP K+  S   TGRRAKRA+KREAA+KA    AA
Sbjct: 184 QEARPVQHKNRGGQASGSEPASSSSCEP-KEKTSSAITGRRAKRAMKREAANKAAEAVAA 243

The following BLAST results are available for this feature:

BLAST of Tan0014165 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99590	2.5e-05	35.00	Protein SCAF11 OS=Homo sapiens OX=9606 GN=SCAF11 PE=1 SV=2	[more]

BLAST of Tan0014165 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153003.1	2.4e-122	90.50	uncharacterized protein LOC111020607 [Momordica charantia]	[more]
XP_022995136.1	3.2e-119	89.30	uncharacterized protein LOC111490767 [Cucurbita maxima]	[more]
KAG6605938.1	4.2e-119	89.30	hypothetical protein SDJN03_03255, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023533579.1	5.5e-119	89.30	uncharacterized protein LOC111795401 [Cucurbita pepo subsp. pepo]	[more]
XP_022943783.1	7.2e-119	90.46	uncharacterized protein LOC111448431 [Cucurbita moschata]	[more]

BLAST of Tan0014165 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGD3	1.2e-122	90.50	uncharacterized protein LOC111020607 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1K158	1.6e-119	89.30	uncharacterized protein LOC111490767 OS=Cucurbita maxima OX=3661 GN=LOC111490767...	[more]
A0A6J1FXD4	3.5e-119	90.46	uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1H396	1.7e-118	88.89	uncharacterized protein LOC111459609 OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A6J1JFP2	2.0e-114	88.38	uncharacterized protein LOC111484597 OS=Cucurbita maxima OX=3661 GN=LOC111484597...	[more]

BLAST of Tan0014165 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19430.1	4.7e-68	55.08	RING/U-box superfamily protein	[more]
AT5G19430.2	4.4e-66	59.38	RING/U-box superfamily protein	[more]
AT5G12310.1	1.6e-63	54.94	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 46..88 e-value: 9.6E-6 score: 35.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 45..89 e-value: 1.3E-8 score: 35.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 46..89 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 32..95 e-value: 8.1E-12 score: 46.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..243
None	No IPR available	PANTHER	PTHR47361	RING/U-BOX SUPERFAMILY PROTEIN	coord: 8..243
None	No IPR available	PANTHER	PTHR47361:SF4	RING/U-BOX SUPERFAMILY PROTEIN	coord: 8..243
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 39..96
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 64..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014165.1	Tan0014165.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding