Tan0014077 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGGATTAAGTTGGAGAGAATTGACATTTAAACACAGTTTTCAATGTTTTGAAGTGTTTATGAAAATTTTAATTGTAATATTGTAAATTTTAAGAGATTAGGGATATTTTTTAAACAAAAATTTAAGATTATTTTTTATAATTTAGGCTTCGTCGAATTATTGTGTGAAAGATGTGCTGAAAACTAGAAAAGAACGTGGGCTTGAGCGAGGATGGACCCTTATGGAAGGAGTTGGGCTGGGCTTTTTTGGGAATTAAGGAAGCTACAAGCCGGTTCGACTTGGTTCAGACCGTTTTTAACCACCACTGACCAAACCAAATTTCAATACGGAATAAACTCAGAAAATCCTTAAAAAAAAAAAAAAATGAAAACCGGTTCAAATCAGTTAGTTGGGTTTGGAATCTCAGTTTTTTTGTTCATGGGAAATTCAAGGCATATTCCCACTATTCTTATTTTCAATAAATGTAGGATCATAATTTAGCCGTGAGAAACTGCCTCATGAATATAATTTGTTATGGTGCGTCAAAATCATCATGGGAAGTGCTTTTGGAAACACTTTCCACTGCTTTTATCTGCCTTTATTTATAAAAAGTAGTTGGGATTAGGAAGTGCTTTTCGTCAACTACTTGACTGGAAAGCACCTTGAAAAAACAGTTATACCAAAGATGCCCTTCTATTTGATGCTTTCTCCACCCACTCCTCCTCCTCCTCCTCCGTTTCTACCCTAGTTTCTTCACTTCCTTGTTCTTCCTCCCACTCGCTTCCATTTTTACCATAATTTTGCCATTGCCCTTTCTCTAGGTAGTCCGCACCAGAAACTCCATTGTTAAGGTACGCTTCTCATTTTTCCATTTAGAATTCTGTCATCTCTTTGTTCTTGATTTCGAATTAATCATCCAGAAATTCACTCTGTTTTGCTGCTGTGTCACTTTTGTTACAAAGAAACAATATCAGAAATTCTGAAACAAATTTGATAGATGAACTAGAAATCCTCTTAGTTTTTGTCATCAGTTGATCGATTTCCCCTTTTTGCGCTACTTCCCCTTTTGATCACCAAATGAATTATGGATCCTACAATTATTGGACTGTTTCCCTCTATTTATTCATCATTGTTTATCATTGTTCAATTCCCCTGGCAACACTTGTAGTAATTAAACTCAGTAGCTGCTAATCACCAAAGATTTATCTAAATGGGTTTGTATCTGAAGATAGAGAGCTTTTTGGAATGAGGGATTTCGACAAGATATTTGTAGACAGGGGATTGCTATTCTATGTGTCGATGCTTTATTCTGATAAGGTTTTTTTGGAACTCATGTCAGAATGAATATGATGAAAACTGAAAGTTAAAACTCCTCTCGATTTCGATAAGTGGTTTCTATACACATTATTGTGGTGGGGCTTTTTAGTTCATCTAAATTTTTCTTGTTCATTGATATGTTTGTTGAAGAGACAGAAAAGGAAAGACAGAGAGAAAGAAGAGATTTTAAGTAGTTTTCTCCTTGTCACCTTGTGTATTTATTAGTTCTTTGGCTATCTCTACTTCAATTCTTTATCATTTTCTGATGGTTTACTTTCTTTGAATCTTTATTTCAATAAAACTTCATCAATTCTAGTCACTTGAAGAATGAACTGCTGGGGTGTAGAGAAAATAGTATCATTTCATGCTCTTTATATTTGAACTTTGTCTATTTGTTCCTATGTCCTCCATGTAACCATGCAAAACTAATTCAGATATTTTGTTATGTTATTTATCTGTTAGAATGTCCAAGAGTATAGCTACTAGTGATGAAAAAGAGAAGCAAATAAAAGCAATTTGGGATGATGTTACTGTTGATTCATTCATACATGTCTGCGTTACTGAGACTTTAAATGGGAATAGACCTCACGGTCATTTTACTAAAATTGGATGGAGGAATGTGGTTAAGAACTTCTATGAAAAGACAGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACAATCAAGAAAGATTGGCAAGTTTGGAATGATTTGATTAGAACAGAGAAGGAATTAGGATGGGACTCTCTAAGACAAACCATCGATGCAAGTAGTCAATGGTGGGATAAAAAATTAAAGGTAATCATCTTTGAATGTGTATTTGTATGACAATTTTAAATTTTAATGAATTAGTTATGAAGTTGGTTTGGGAATTTTAATTTTTAATGCAACTAATATATAGTAGATGCAAATGATGTAATATTATTATGATTTCATAGGTTCTTCCTGAGGCAGCCAAGTTTCGTGCAAAAGGACTACAAAATGTGGAGCTCTTGAACATTCTTTTTAAAGATGTTGCAGTCAATGGGGGAGCATGGGCCCCAACCCCATCTCAAGTTGTTTTTCTTAAGACTACAAGTGACGAGTTTGAAGATTATAATGATGACACAATAGGAGACACAAAGTTCAATGAGAATGAGTTTAACAATGTTGAAAGTAACACTAATGAAGTTAATACTAGTGCAACTTATACTCAAGGGAGTCAGAAAAGGAGGAAAAAAGTAGATTCAAAGATGGGATCTTCTAGGTTGTTTGATGCATTAGATCGTCTTTGTGATGCCATAGAATATAGAAGAAGAGATTTACCAGGATGTAGTACTCTCGAAGTAATGGAAACTTTAAGAGGCTTACCTGGGATTGTAGAAGGTGATGAGTTGTATATGAAGGCTGCTGATATCCTTATTAAAAGAGAAAATCGAGAAATGTTTGTGGCTTTACGAAAGCCAGAGATACAAATTACATGGCTTAAACAAAAAAGAGTTTGATATTATATTGACAGGGAGGATTGTAAATTTTCTGATTCCTTCCAATGTTTT CTTGGATTAAGTTGGAGAGAATTGACATTTAAACACAGTTTTCAATGTTTTGAAGTGTTTATGAAAATTTTAATTGTAATATTGTAAATTTTAAGAGATTAGGGATATTTTTTAAACAAAAATTTAAGATTATTTTTTATAATTTAGGCTTCGTCGAATTATTGTGTGAAAGATGTGCTGAAAACTAGAAAAGAACGTGGGCTTGAGCGAGGATGGACCCTTATGGAAGGAGTTGGGCTGGGCTTTTTTGGGAATTAAGGAAGCTACAAGCCGGTTCGACTTGGTTCAGACCGTTTTTAACCACCACTGACCAAACCAAATTTCAATACGGAATAAACTCAGAAAATCCTTAAAAAAAAAAAAAAATGAAAACCGGTTCAAATCAGTTAGTTGGGTTTGGAATCTCAGTTTTTTTGTTCATGGGAAATTCAAGGCATATTCCCACTATTCTTATTTTCAATAAATGTAGGATCATAATTTAGCCGTGAGAAACTGCCTCATGAATATAATTTGTTATGGTGCGTCAAAATCATCATGGGAAGTGCTTTTGGAAACACTTTCCACTGCTTTTATCTGCCTTTATTTATAAAAAGTAGTTGGGATTAGGAAGTGCTTTTCGTCAACTACTTGACTGGAAAGCACCTTGAAAAAACAGTTATACCAAAGATGCCCTTCTATTTGATGCTTTCTCCACCCACTCCTCCTCCTCCTCCTCCGTTTCTACCCTAGTTTCTTCACTTCCTTGTTCTTCCTCCCACTCGCTTCCATTTTTACCATAATTTTGCCATTGCCCTTTCTCTAGGTAGTCCGCACCAGAAACTCCATTGTTAAGAATGTCCAAGAGTATAGCTACTAGTGATGAAAAAGAGAAGCAAATAAAAGCAATTTGGGATGATGTTACTGTTGATTCATTCATACATGTCTGCGTTACTGAGACTTTAAATGGGAATAGACCTCACGGTCATTTTACTAAAATTGGATGGAGGAATGTGGTTAAGAACTTCTATGAAAAGACAGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACAATCAAGAAAGATTGGCAAGTTTGGAATGATTTGATTAGAACAGAGAAGGAATTAGGATGGGACTCTCTAAGACAAACCATCGATGCAAGTAGTCAATGGTGGGATAAAAAATTAAAGGTTCTTCCTGAGGCAGCCAAGTTTCGTGCAAAAGGACTACAAAATGTGGAGCTCTTGAACATTCTTTTTAAAGATGTTGCAGTCAATGGGGGAGCATGGGCCCCAACCCCATCTCAAGTTGTTTTTCTTAAGACTACAAGTGACGAGTTTGAAGATTATAATGATGACACAATAGGAGACACAAAGTTCAATGAGAATGAGTTTAACAATGTTGAAAGTAACACTAATGAAGTTAATACTAGTGCAACTTATACTCAAGGGAGTCAGAAAAGGAGGAAAAAAGTAGATTCAAAGATGGGATCTTCTAGGTTGTTTGATGCATTAGATCGTCTTTGTGATGCCATAGAATATAGAAGAAGAGATTTACCAGGATGTAGTACTCTCGAAGTAATGGAAACTTTAAGAGGCTTACCTGGGATTGTAGAAGGTGATGAGTTGTATATGAAGGCTGCTGATATCCTTATTAAAAGAGAAAATCGAGAAATGTTTGTGGCTTTACGAAAGCCAGAGATACAAATTACATGGCTTAAACAAAAAAGAGTTTGATATTATATTGACAGGGAGGATTGTAAATTTTCTGATTCCTTCCAATGTTTT ATGTCCAAGAGTATAGCTACTAGTGATGAAAAAGAGAAGCAAATAAAAGCAATTTGGGATGATGTTACTGTTGATTCATTCATACATGTCTGCGTTACTGAGACTTTAAATGGGAATAGACCTCACGGTCATTTTACTAAAATTGGATGGAGGAATGTGGTTAAGAACTTCTATGAAAAGACAGGAAGAAATTATGGATACAAGCAACTTAAGAACAAATGGACAACAATCAAGAAAGATTGGCAAGTTTGGAATGATTTGATTAGAACAGAGAAGGAATTAGGATGGGACTCTCTAAGACAAACCATCGATGCAAGTAGTCAATGGTGGGATAAAAAATTAAAGGTTCTTCCTGAGGCAGCCAAGTTTCGTGCAAAAGGACTACAAAATGTGGAGCTCTTGAACATTCTTTTTAAAGATGTTGCAGTCAATGGGGGAGCATGGGCCCCAACCCCATCTCAAGTTGTTTTTCTTAAGACTACAAGTGACGAGTTTGAAGATTATAATGATGACACAATAGGAGACACAAAGTTCAATGAGAATGAGTTTAACAATGTTGAAAGTAACACTAATGAAGTTAATACTAGTGCAACTTATACTCAAGGGAGTCAGAAAAGGAGGAAAAAAGTAGATTCAAAGATGGGATCTTCTAGGTTGTTTGATGCATTAGATCGTCTTTGTGATGCCATAGAATATAGAAGAAGAGATTTACCAGGATGTAGTACTCTCGAAGTAATGGAAACTTTAAGAGGCTTACCTGGGATTGTAGAAGGTGATGAGTTGTATATGAAGGCTGCTGATATCCTTATTAAAAGAGAAAATCGAGAAATGTTTGTGGCTTTACGAAAGCCAGAGATACAAATTACATGGCTTAAACAAAAAAGAGTTTGA MSKSIATSDEKEKQIKAIWDDVTVDSFIHVCVTETLNGNRPHGHFTKIGWRNVVKNFYEKTGRNYGYKQLKNKWTTIKKDWQVWNDLIRTEKELGWDSLRQTIDASSQWWDKKLKVLPEAAKFRAKGLQNVELLNILFKDVAVNGGAWAPTPSQVVFLKTTSDEFEDYNDDTIGDTKFNENEFNNVESNTNEVNTSATYTQGSQKRRKKVDSKMGSSRLFDALDRLCDAIEYRRRDLPGCSTLEVMETLRGLPGIVEGDELYMKAADILIKRENREMFVALRKPEIQITWLKQKRV Homology
BLAST of Tan0014077 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.9e-26 Identity = 81/284 (28.52%), Postives = 129/284 (45.42%), Query Frame = 0
BLAST of Tan0014077 vs. NCBI nr
Match: XP_008436966.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo] >KAA0055085.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 526.9 bits (1356), Expect = 1.1e-145 Identity = 260/297 (87.54%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Tan0014077 vs. NCBI nr
Match: XP_022159819.1 (L10-interacting MYB domain-containing protein-like [Momordica charantia] >XP_022159820.1 L10-interacting MYB domain-containing protein-like [Momordica charantia]) HSP 1 Score: 523.9 bits (1348), Expect = 9.3e-145 Identity = 256/296 (86.49%), Postives = 277/296 (93.58%), Query Frame = 0
BLAST of Tan0014077 vs. NCBI nr
Match: XP_038874429.1 (L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874430.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874431.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida] >XP_038874432.1 L10-interacting MYB domain-containing protein-like [Benincasa hispida]) HSP 1 Score: 521.2 bits (1341), Expect = 6.0e-144 Identity = 259/297 (87.21%), Postives = 274/297 (92.26%), Query Frame = 0
BLAST of Tan0014077 vs. NCBI nr
Match: XP_004143736.1 (L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740844.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >XP_031740845.1 L10-interacting MYB domain-containing protein [Cucumis sativus] >KGN50325.1 hypothetical protein Csa_000493 [Cucumis sativus]) HSP 1 Score: 510.0 bits (1312), Expect = 1.4e-140 Identity = 253/297 (85.19%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Tan0014077 vs. NCBI nr
Match: XP_022929169.1 (L10-interacting MYB domain-containing protein-like [Cucurbita moschata] >XP_022929170.1 L10-interacting MYB domain-containing protein-like [Cucurbita moschata]) HSP 1 Score: 500.0 bits (1286), Expect = 1.4e-137 Identity = 255/304 (83.88%), Postives = 276/304 (90.79%), Query Frame = 0
BLAST of Tan0014077 vs. ExPASy TrEMBL
Match: A0A5A7UN70 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00110 PE=4 SV=1) HSP 1 Score: 526.9 bits (1356), Expect = 5.3e-146 Identity = 260/297 (87.54%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Tan0014077 vs. ExPASy TrEMBL
Match: A0A1S3AT15 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103482538 PE=4 SV=1) HSP 1 Score: 526.9 bits (1356), Expect = 5.3e-146 Identity = 260/297 (87.54%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Tan0014077 vs. ExPASy TrEMBL
Match: A0A6J1DZU8 (L10-interacting MYB domain-containing protein-like OS=Momordica charantia OX=3673 GN=LOC111026126 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 4.5e-145 Identity = 256/296 (86.49%), Postives = 277/296 (93.58%), Query Frame = 0
BLAST of Tan0014077 vs. ExPASy TrEMBL
Match: A0A0A0KKV6 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167170 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 6.7e-141 Identity = 253/297 (85.19%), Postives = 275/297 (92.59%), Query Frame = 0
BLAST of Tan0014077 vs. ExPASy TrEMBL
Match: A0A6J1EN01 (L10-interacting MYB domain-containing protein-like OS=Cucurbita moschata OX=3662 GN=LOC111435828 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 6.9e-138 Identity = 255/304 (83.88%), Postives = 276/304 (90.79%), Query Frame = 0
BLAST of Tan0014077 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 119.4 bits (298), Expect = 4.9e-27 Identity = 81/284 (28.52%), Postives = 129/284 (45.42%), Query Frame = 0
BLAST of Tan0014077 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 119.4 bits (298), Expect = 4.9e-27 Identity = 81/284 (28.52%), Postives = 129/284 (45.42%), Query Frame = 0
BLAST of Tan0014077 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-22 Identity = 75/301 (24.92%), Postives = 139/301 (46.18%), Query Frame = 0
BLAST of Tan0014077 vs. TAIR 10
Match: AT2G19220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 443 Blast hits to 267 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 3.1e-13 Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = 0
BLAST of Tan0014077 vs. TAIR 10
Match: AT3G11310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06 Identity = 49/208 (23.56%), Postives = 90/208 (43.27%), Query Frame = 0
HSP 2 Score: 42.0 bits (97), Expect = 9.9e-04 Identity = 18/51 (35.29%), Postives = 32/51 (62.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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