Tan0014004 (gene) Snake gourd v1

Overview


Name	Tan0014004
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	remorin
Location	LG01: 2196875 .. 2198446 (+)
RNA-Seq Expression	Tan0014004
Synteny	Tan0014004

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACTCCCTCACACTTCCCTTCTTCATTCTCCAACTATAATATCTCAACTATTTTTTTTCTCTTCCAATTTCTCTCTCTAAGTCTTAACTCAGAAATGACCGCCGATGAGCCCAAAAAGGTGGAATCTGAATCTTCGTCGGAGCCGACCAAAGACGTGGCGGAGGAGAAATCAATCATCCCATTAAACCCACCGGAGGAGAAACCGGCCGATGACTCCAAAGTTCTGGCCATCGTGGAAAGTAATTTACAGATATAAAGCTCTCAACTTTTTCATTTTTTTAGCTTTTTCGAGCTGTTTGGTTGGTGGGAAAAGAATTTTCGAATTCATCTTGCTCTGTTTAAGAAAGAAAGAAAAGAGAAGGGGAAATTTCACTTTTCTTTGGATTTGTGAAATGGAAAAGCTGAAAATTTTTATGGGTCTGTGTTAAAATTTCATATTTGGCTCTGTTTTTTTTTTTTTTGGGTTGACAGAGACTCAAGCAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATCAATAGAGGTAATCAAATGGTGATTTGAAGTGATTAATATCAATAATTGAATTCCCTAATGAATAATTTCATTTAATTTATTGTTTTTGTTTTTATTATGGTTATTAGACGCTGTACTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAAAATAGGTACTCATCATTTTTTATTTTCCTATATAGCTGTTTTGGAAAATTTTGTCTTAAATATTAAAGACATTTAAAGAGAAAAATAACAAAATAATAATAATAAAAATGTCCATAAGCAAGTACTATAAAAATTAAAATCCAAAAAACAGAACCAACTGGCAAGTTCAAGATTGCCTTTTTGCCATATAATTCATAGACTTTGCCTCGATCCCGGGTTAGTTCGTATTTGTGATGTAATATTCTAAAAATCAAACCATTACTACAACCTATAAACTTGAATTTTTAATAACATAAATCATTCTCTTGCTATCCCATTTTTTGGGAAATTGCTTCCTTTTTTGAGCTAATGGAATTTGTTGAACAGAGCTCATAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCAGCGGTCGAGGCCGAACTAAAACAGATCGAGGTAAGCAAATCGAACGTCGAATGTGTTTGGATGACGAGGAAATTTTCGAACATATAGGTATAAATATATGTTTGTATTTGAGAGCAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATTGAGAAAATGAAGAACAAAATAGCATTGATTCACAAAGAAGCAGAAGAAAAGAAGGCAGTAATTGAAGCGAAAAGAGGAGAAGACAAGCTTAAGGCTGAGGAAATTGCAGCAAAATACAGAGCCACTGGAACTGCTCCAAAGAAAATTCTTGGTTGTTTTTAAAGCAATCTCTATCTTTGATCTATTTCTCTGTTGTATGTGCAATTACTTGTTTATTTGTTGATGGGAGTTGCTTTGTTTTTTTTTTATGATATTTGCTTAATTATATGTCTACCTAATTTATTTCTATTTA

mRNA sequence

CAACTCCCTCACACTTCCCTTCTTCATTCTCCAACTATAATATCTCAACTATTTTTTTTCTCTTCCAATTTCTCTCTCTAAGTCTTAACTCAGAAATGACCGCCGATGAGCCCAAAAAGGTGGAATCTGAATCTTCGTCGGAGCCGACCAAAGACGTGGCGGAGGAGAAATCAATCATCCCATTAAACCCACCGGAGGAGAAACCGGCCGATGACTCCAAAGTTCTGGCCATCGTGGAAAAGACTCAAGCAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATCAATAGAGACGCTGTACTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAAAATAGAGCTCATAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCAGCGGTCGAGGCCGAACTAAAACAGATCGAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATTGAGAAAATGAAGAACAAAATAGCATTGATTCACAAAGAAGCAGAAGAAAAGAAGGCAGTAATTGAAGCGAAAAGAGGAGAAGACAAGCTTAAGGCTGAGGAAATTGCAGCAAAATACAGAGCCACTGGAACTGCTCCAAAGAAAATTCTTGGTTGTTTTTAAAGCAATCTCTATCTTTGATCTATTTCTCTGTTGTATGTGCAATTACTTGTTTATTTGTTGATGGGAGTTGCTTTGTTTTTTTTTTATGATATTTGCTTAATTATATGTCTACCTAATTTATTTCTATTTA

Coding sequence (CDS)

ATGACCGCCGATGAGCCCAAAAAGGTGGAATCTGAATCTTCGTCGGAGCCGACCAAAGACGTGGCGGAGGAGAAATCAATCATCCCATTAAACCCACCGGAGGAGAAACCGGCCGATGACTCCAAAGTTCTGGCCATCGTGGAAAAGACTCAAGCAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATCAATAGAGACGCTGTACTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAAAATAGAGCTCATAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCAGCGGTCGAGGCCGAACTAAAACAGATCGAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATTGAGAAAATGAAGAACAAAATAGCATTGATTCACAAAGAAGCAGAAGAAAAGAAGGCAGTAATTGAAGCGAAAAGAGGAGAAGACAAGCTTAAGGCTGAGGAAATTGCAGCAAAATACAGAGCCACTGGAACTGCTCCAAAGAAAATTCTTGGTTGTTTTTAA

Protein sequence

MTADEPKKVESESSSEPTKDVAEEKSIIPLNPPEEKPADDSKVLAIVEKTQAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATGTAPKKILGCF

Homology

[Close]

BLAST of Tan0014004 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-54
Identity = 130/177 (73.45%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 17  PTKDVAEEKSII-PLNPP---EEKPADDSKVLAIVE-KTQAKAEEKEKDSEGSINRDAVL 76
           P + VA+EK+I+ P  PP   E++  DDSK L +VE K    A+EK+   EGSI+RDAVL
Sbjct: 25  PKEVVADEKAIVAPALPPPAEEKEKPDDSKALVVVETKAPEPADEKK---EGSIDRDAVL 84

Query: 77  ARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKQIEEKLEKKK 136
           ARVATEKR+SLIKAWEESEKSKAEN+A KK+SAIG+WENSKKA +EAELK++EE+LEKKK
Sbjct: 85  ARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKK 144

Query: 137 AEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATGTAPKKILGCF 189
           AEY EKMKNKIAL+HKEAEEK+A+IEAKRGED LKAEE+AAKYRATGTAPKKILG F
Sbjct: 145 AEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of Tan0014004 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-51
Identity = 128/205 (62.44%), Postives = 154/205 (75.12%), Query Frame = 0


Query: 1   MTADEPKKV-ESESSSEPTKDVAEEK-----------------SIIPLNPPEEKPADDSK 60
           M  +EPKKV E+ S   PT +V  EK                  ++P   P E+  +DSK
Sbjct: 1   MAEEEPKKVTETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSK 60

Query: 61  VLAIVEKTQAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKL 120
             AIV     + EE++K  EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KKL
Sbjct: 61  --AIVPVVPKEVEEEKK--EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKL 120

Query: 121 SAIGSWENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGE 180
           S+IGSWEN+KKAAVEAELK++EE+LEKKKAEY+E+MKNKIA IHKEAEEK+A+IEAKRGE
Sbjct: 121 SSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGE 180

Query: 181 DKLKAEEIAAKYRATGTAPKKILGC 188
           + LKAEE+AAKYRATGTAPKK+ GC
Sbjct: 181 EILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of Tan0014004 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.5e-46
Identity = 112/186 (60.22%), Postives = 140/186 (75.27%), Query Frame = 0


Query: 3   ADEPKKVESESSSEPTKDVAEEKSIIPLNPPEEKPADDSKVLAIVEKTQAKAEEKEKDSE 62
           A+ P    + + ++ TKDVAEEK     NPP E+  DDSK L +VEK   +     K + 
Sbjct: 31  AEIPAPAPAPTPADVTKDVAEEKI---QNPPPEQIFDDSKALTVVEK-PVEEPAPAKPAS 90

Query: 63  GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKQ 122
            S++RD  LA ++ EKRLS ++AWEESEKSKAEN+A KK++ + +WENSKKAAVEA+LK+
Sbjct: 91  ASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKK 150

Query: 123 IEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATGTAPK 182
           IEE+LEKKKAEY E+MKNK+A IHKEAEE++A+IEAKRGED LKAEE AAKYRATG  PK
Sbjct: 151 IEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPK 210

Query: 183 KILGCF 189
              GCF
Sbjct: 211 ATCGCF 212

[Close]

BLAST of Tan0014004 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.8e-41
Identity = 107/190 (56.32%), Postives = 136/190 (71.58%), Query Frame = 0


Query: 3   ADEPKKVESESSSEPTKDVAEEKSIIPLNPPEEK----PADDSKVLAIVEKTQAKAEEKE 62
           A+E K  + +  S      A+E +  P+   +EK    P  +SK LA+VEK   +    +
Sbjct: 2   AEEQKTSKVDVESPAVLAPAKEPTPAPVEVADEKIHNPPPVESKALAVVEK-PIEEHTPK 61

Query: 63  KDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEA 122
           K S GS +RD +LA +  EK+ S IKAWEESEKSKAENRA KK+S + +WENSKKAAVEA
Sbjct: 62  KASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEA 121

Query: 123 ELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATG 182
           +L++IEEKLEKKKA+Y EKMKNK+A IHK AEEK+A++EAK+GE+ LKAEE+ AKYRATG
Sbjct: 122 QLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATG 181

Query: 183 TAPKKILGCF 189
             PK   GCF
Sbjct: 182 VVPKATCGCF 190

[Close]

BLAST of Tan0014004 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09
Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 63  GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKQ 122
           G    +  + +V  E+  S I AW+ +E +K  NR  ++   I  WE  +     A LK+
Sbjct: 192 GGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVEKANAWLKK 251

Query: 123 IEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATGTAPK 182
            E KLE+K+A+ +EK +N++A   ++AEEK+A  EAKRG    +  E+A   RA G AP 
Sbjct: 252 YERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELANFMRAVGRAPS 311

Query: 183 K 184
           K
Sbjct: 312 K 312

[Close]

BLAST of Tan0014004 vs. NCBI nr
Match: XP_038875881.1 (remorin-like isoform X2 [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 8.4e-75
Identity = 170/200 (85.00%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 1   MTADEPKKVESESSS------------EPTKDVAEEKSIIPLNPPEEKPADDSKVLAIVE 60
           M ADEP KVES+S S            E TKDVAEEKSIIPL PPE KPADDSK LA +E
Sbjct: 1   MAADEPNKVESQSPSERPPLPAADSMEERTKDVAEEKSIIPLTPPEVKPADDSKALATIE 60

Query: 61  KTQAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW 120
           KT  KAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW
Sbjct: 61  KTHEKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW 120

Query: 121 ENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAE 180
           ENS KAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHK AEEKKA IEAKRGE+K+KAE
Sbjct: 121 ENSNKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKADIEAKRGEEKIKAE 180

Query: 181 EIAAKYRATGTAPKKILGCF 189
           EIAAKYR+TGTAPKKILGCF
Sbjct: 181 EIAAKYRSTGTAPKKILGCF 200

[Close]

BLAST of Tan0014004 vs. NCBI nr
Match: XP_008439225.1 (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 9.3e-74
Identity = 171/198 (86.36%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 2   TADEPKKVESESS---------SEPTK-DVAEEKSIIPLNPPE-EKPADDSKVLAIVEKT 61
           ++DEPKK+ESE S         +EPTK DVAEEKSIIPL PPE EKPADDSK LAIVEK+
Sbjct: 3   SSDEPKKIESEESPSEPPPPAAAEPTKDDVAEEKSIIPLPPPEDEKPADDSKALAIVEKS 62

Query: 62  QAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 121
             KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN
Sbjct: 63  DEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 122

Query: 122 SKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEI 181
           SKKAAVEAELKQIEEKLEKKK EYIEKMKNKIALIHK AEEKKAVIEAKRGE+KLKAEEI
Sbjct: 123 SKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEI 182

Query: 182 AAKYRATGTAPKKILGCF 189
           AAK+RATGTAPKKI GCF
Sbjct: 183 AAKHRATGTAPKKIFGCF 200

[Close]

BLAST of Tan0014004 vs. NCBI nr
Match: KAA0033640.1 (remorin [Cucumis melo var. makuwa])

HSP 1 Score: 287.3 bits (734), Expect = 9.3e-74
Identity = 171/198 (86.36%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 2   TADEPKKVESESS---------SEPTK-DVAEEKSIIPLNPPE-EKPADDSKVLAIVEKT 61
           ++DEPKK+ESE S         +EPTK DVAEEKSIIPL PPE EKPADDSK LAIVEK+
Sbjct: 3   SSDEPKKIESEESPLEPPPPAAAEPTKDDVAEEKSIIPLPPPEDEKPADDSKALAIVEKS 62

Query: 62  QAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 121
             KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN
Sbjct: 63  DEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 122

Query: 122 SKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEI 181
           SKKAAVEAELKQIEEKLEKKK EYIEKMKNKIALIHK AEEKKAVIEAKRGE+KLKAEEI
Sbjct: 123 SKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEI 182

Query: 182 AAKYRATGTAPKKILGCF 189
           AAK+RATGTAPKKI GCF
Sbjct: 183 AAKHRATGTAPKKIFGCF 200

[Close]

BLAST of Tan0014004 vs. NCBI nr
Match: XP_038875876.1 (remorin-like isoform X1 [Benincasa hispida])

HSP 1 Score: 283.1 bits (723), Expect = 1.7e-72
Identity = 169/205 (82.44%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 1   MTADEPKKVESESSS------------EPTKDVAEEKSIIPLNPPEEKPADDSKVLAIVE 60
           M ADEP KVES+S S            E TKDVAEEKSIIPL PPE KPADDSK LA +E
Sbjct: 1   MAADEPNKVESQSPSERPPLPAADSMEERTKDVAEEKSIIPLTPPEVKPADDSKALATIE 60

Query: 61  -----KTQAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS 120
                +T  KAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS
Sbjct: 61  SFGMIETHEKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS 120

Query: 121 AIGSWENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGED 180
           AIGSWENS KAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHK AEEKKA IEAKRGE+
Sbjct: 121 AIGSWENSNKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKADIEAKRGEE 180

Query: 181 KLKAEEIAAKYRATGTAPKKILGCF 189
           K+KAEEIAAKYR+TGTAPKKILGCF
Sbjct: 181 KIKAEEIAAKYRSTGTAPKKILGCF 205

[Close]

BLAST of Tan0014004 vs. NCBI nr
Match: XP_004140777.2 (remorin [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 1.4e-69
Identity = 161/185 (87.03%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 6   PKKVESESSSEPTK-DVAEEKSIIPLNPPE-EKPADDSKVLAIVEKTQAKAEEKEKDSEG 65
           P  + S + +EPTK DVAEEKSIIPL PPE EKPADDSK LAIVEK+  KAEEKEK+SEG
Sbjct: 117 PLPLPSPAVAEPTKDDVAEEKSIIPLLPPEDEKPADDSKALAIVEKSDEKAEEKEKESEG 176

Query: 66  SINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKQI 125
           SINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKQI
Sbjct: 177 SINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKQI 236

Query: 126 EEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATGTAPKK 185
           EEK EKKK E+IEKMKNKIA IHK+AEEKKAVIEAKRGE+KLKAEEIAAK+RATGTAPKK
Sbjct: 237 EEKFEKKKGEHIEKMKNKIASIHKKAEEKKAVIEAKRGEEKLKAEEIAAKHRATGTAPKK 296

Query: 186 ILGCF 189
           I GCF
Sbjct: 297 IFGCF 301

[Close]

BLAST of Tan0014004 vs. ExPASy TrEMBL
Match: A0A5A7SRU5 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 171/198 (86.36%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 2   TADEPKKVESESS---------SEPTK-DVAEEKSIIPLNPPE-EKPADDSKVLAIVEKT 61
           ++DEPKK+ESE S         +EPTK DVAEEKSIIPL PPE EKPADDSK LAIVEK+
Sbjct: 3   SSDEPKKIESEESPLEPPPPAAAEPTKDDVAEEKSIIPLPPPEDEKPADDSKALAIVEKS 62

Query: 62  QAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 121
             KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN
Sbjct: 63  DEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 122

Query: 122 SKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEI 181
           SKKAAVEAELKQIEEKLEKKK EYIEKMKNKIALIHK AEEKKAVIEAKRGE+KLKAEEI
Sbjct: 123 SKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEI 182

Query: 182 AAKYRATGTAPKKILGCF 189
           AAK+RATGTAPKKI GCF
Sbjct: 183 AAKHRATGTAPKKIFGCF 200

[Close]

BLAST of Tan0014004 vs. ExPASy TrEMBL
Match: A0A1S3AXW2 (remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 171/198 (86.36%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 2   TADEPKKVESESS---------SEPTK-DVAEEKSIIPLNPPE-EKPADDSKVLAIVEKT 61
           ++DEPKK+ESE S         +EPTK DVAEEKSIIPL PPE EKPADDSK LAIVEK+
Sbjct: 3   SSDEPKKIESEESPSEPPPPAAAEPTKDDVAEEKSIIPLPPPEDEKPADDSKALAIVEKS 62

Query: 62  QAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 121
             KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN
Sbjct: 63  DEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 122

Query: 122 SKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEI 181
           SKKAAVEAELKQIEEKLEKKK EYIEKMKNKIALIHK AEEKKAVIEAKRGE+KLKAEEI
Sbjct: 123 SKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEI 182

Query: 182 AAKYRATGTAPKKILGCF 189
           AAK+RATGTAPKKI GCF
Sbjct: 183 AAKHRATGTAPKKIFGCF 200

[Close]

BLAST of Tan0014004 vs. ExPASy TrEMBL
Match: A0A0A0L9S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71
Identity = 167/203 (82.27%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 1   MTADEPKKVESESS-------------SEPTK-DVAEEKSIIPLNPPE-EKPADDSKVLA 60
           M +DEPK++E E S             +EPTK DVAEEKSIIPL PPE EKPADDSK LA
Sbjct: 1   MASDEPKQIEPEESPSEAPPPPPPPAVAEPTKDDVAEEKSIIPLLPPEDEKPADDSKALA 60

Query: 61  IVEKTQAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI 120
           IVEK+  KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI
Sbjct: 61  IVEKSDEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI 120

Query: 121 GSWENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKL 180
           GSWENSKKAAVEAELKQIEEK EKKK E+IEKMKNKIA IHK+AEEKKAVIEAKRGE+KL
Sbjct: 121 GSWENSKKAAVEAELKQIEEKFEKKKGEHIEKMKNKIASIHKKAEEKKAVIEAKRGEEKL 180

Query: 181 KAEEIAAKYRATGTAPKKILGCF 189
           KAEEIAAK+RATGTAPKKI GCF
Sbjct: 181 KAEEIAAKHRATGTAPKKIFGCF 203

[Close]

BLAST of Tan0014004 vs. ExPASy TrEMBL
Match: A0A6J1HZY5 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111467746 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 157/200 (78.50%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 1   MTADEPKKVESESSS------------EPTKDVAEEKSIIPLNPPEEKPADDSKVLAIVE 60
           M  DEPKK+ESE  S            EPTK+VAEEKSII L PPE+ PADDSK L I E
Sbjct: 1   MADDEPKKLESEPPSEPSPPQAAELVEEPTKNVAEEKSIIQLTPPEKTPADDSKPLLIFE 60

Query: 61  KTQAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW 120
           KT+AK EEK+     SINRDA LARVATEKRL+LIKAWEESEKS+ ENRAHKKLS IGSW
Sbjct: 61  KTEAKTEEKQ---SSSINRDAELARVATEKRLTLIKAWEESEKSRTENRAHKKLSEIGSW 120

Query: 121 ENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAE 180
           E+SKKAAVEAELKQIEEK EKKKAEY+EKMKNKIALIHK AEEKKAVIEAKRGE+KLKAE
Sbjct: 121 ESSKKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKAE 180

Query: 181 EIAAKYRATGTAPKKILGCF 189
           EIAAKYRATGTAPKKILGCF
Sbjct: 181 EIAAKYRATGTAPKKILGCF 197

[Close]

BLAST of Tan0014004 vs. ExPASy TrEMBL
Match: A0A6J1FZ79 (remorin OS=Cucurbita moschata OX=3662 GN=LOC111449242 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.0e-66
Identity = 155/200 (77.50%), Postives = 168/200 (84.00%), Query Frame = 0


Query: 1   MTADEPKKVESESSS------------EPTKDVAEEKSIIPLNPPEEKPADDSKVLAIVE 60
           M  DEPK+++SE  S            EPTK+VAEEKSII L PPE+ PADDSK L I+E
Sbjct: 1   MADDEPKRLDSEPPSESSPPQVAELVEEPTKNVAEEKSIIQLTPPEKTPADDSKPLLIIE 60

Query: 61  KTQAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW 120
           KT+AK EEK+     SINRDA LARVATEKRL+LIKAWEESEKS+ ENRAHKKLS IGSW
Sbjct: 61  KTEAKTEEKQ---SSSINRDAELARVATEKRLTLIKAWEESEKSRTENRAHKKLSEIGSW 120

Query: 121 ENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAE 180
           E+SKKAAVEAELKQIEEK EKKKAEY+EKMKNKIALIHK AEEKKAVIEAKRGE+KLKAE
Sbjct: 121 ESSKKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKAE 180

Query: 181 EIAAKYRATGTAPKKILGCF 189
           EIAAKYRATGTAPKKILGCF
Sbjct: 181 EIAAKYRATGTAPKKILGCF 197

[Close]

BLAST of Tan0014004 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-52
Identity = 129/204 (63.24%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 1   MTADEPKKV-ESESSSEPTKDVAEEKSIIPLN-PPEEKPADDSKVLAIVEKTQAKAEEKE 60
           M  +EPKKV E+ S   PT +V  EK     +  P+EKP     VL     + A AEEK+
Sbjct: 1   MAEEEPKKVTETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVL----PSPAPAEEKQ 60

Query: 61  KDS---------------EGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS 120
           +DS               EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KKLS
Sbjct: 61  EDSKAIVPVVPKVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLS 120

Query: 121 AIGSWENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGED 180
           +IGSWEN+KKAAVEAELK++EE+LEKKKAEY+E+MKNKIA IHKEAEEK+A+IEAKRGE+
Sbjct: 121 SIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEE 180

Query: 181 KLKAEEIAAKYRATGTAPKKILGC 188
            LKAEE+AAKYRATGTAPKK+ GC
Sbjct: 181 ILKAEELAAKYRATGTAPKKLFGC 200

[Close]

BLAST of Tan0014004 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.6e-52
Identity = 128/205 (62.44%), Postives = 154/205 (75.12%), Query Frame = 0


Query: 1   MTADEPKKV-ESESSSEPTKDVAEEK-----------------SIIPLNPPEEKPADDSK 60
           M  +EPKKV E+ S   PT +V  EK                  ++P   P E+  +DSK
Sbjct: 1   MAEEEPKKVTETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSK 60

Query: 61  VLAIVEKTQAKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKL 120
             AIV     + EE++K  EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KKL
Sbjct: 61  --AIVPVVPKEVEEEKK--EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKL 120

Query: 121 SAIGSWENSKKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGE 180
           S+IGSWEN+KKAAVEAELK++EE+LEKKKAEY+E+MKNKIA IHKEAEEK+A+IEAKRGE
Sbjct: 121 SSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGE 180

Query: 181 DKLKAEEIAAKYRATGTAPKKILGC 188
           + LKAEE+AAKYRATGTAPKK+ GC
Sbjct: 181 EILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of Tan0014004 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 185.3 bits (469), Expect = 4.6e-47
Identity = 112/186 (60.22%), Postives = 140/186 (75.27%), Query Frame = 0


Query: 3   ADEPKKVESESSSEPTKDVAEEKSIIPLNPPEEKPADDSKVLAIVEKTQAKAEEKEKDSE 62
           A+ P    + + ++ TKDVAEEK     NPP E+  DDSK L +VEK   +     K + 
Sbjct: 31  AEIPAPAPAPTPADVTKDVAEEKI---QNPPPEQIFDDSKALTVVEK-PVEEPAPAKPAS 90

Query: 63  GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELKQ 122
            S++RD  LA ++ EKRLS ++AWEESEKSKAEN+A KK++ + +WENSKKAAVEA+LK+
Sbjct: 91  ASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKK 150

Query: 123 IEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATGTAPK 182
           IEE+LEKKKAEY E+MKNK+A IHKEAEE++A+IEAKRGED LKAEE AAKYRATG  PK
Sbjct: 151 IEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPK 210

Query: 183 KILGCF 189
              GCF
Sbjct: 211 ATCGCF 212

[Close]

BLAST of Tan0014004 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 181.8 bits (460), Expect = 5.1e-46
Identity = 112/188 (59.57%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 1   MTADEPKKVESESSSEPTKDVAEEKSIIPLNPPEEKPADDSKVLAIVEKTQAKAEEKEKD 60
           MT +E KKV    +      VA E    P  P +E+ +DDSK + +V   +   E+K+  
Sbjct: 1   MTLEEQKKVIMPEA------VASE----PSPPSKEEKSDDSKAIVLVVAAKEPTEDKK-- 60

Query: 61  SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAEL 120
             GS++RDAVL R+  +KR+SLIKAWEE+EKSK EN+A KK+S++G+WENSKKA+VEAEL
Sbjct: 61  -VGSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAEL 120

Query: 121 KQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATGTA 180
           K+IEE+L KKKA Y E+MKNKIA IHKEAEEK+A+ EAKRGED LKAEE+AAKYRATGTA
Sbjct: 121 KKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTA 175

Query: 181 PKKILGCF 189
           P K+ G F
Sbjct: 181 PTKLFGFF 175

[Close]

BLAST of Tan0014004 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.4e-42
Identity = 107/190 (56.32%), Postives = 136/190 (71.58%), Query Frame = 0


Query: 3   ADEPKKVESESSSEPTKDVAEEKSIIPLNPPEEK----PADDSKVLAIVEKTQAKAEEKE 62
           A+E K  + +  S      A+E +  P+   +EK    P  +SK LA+VEK   +    +
Sbjct: 2   AEEQKTSKVDVESPAVLAPAKEPTPAPVEVADEKIHNPPPVESKALAVVEK-PIEEHTPK 61

Query: 63  KDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEA 122
           K S GS +RD +LA +  EK+ S IKAWEESEKSKAENRA KK+S + +WENSKKAAVEA
Sbjct: 62  KASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEA 121

Query: 123 ELKQIEEKLEKKKAEYIEKMKNKIALIHKEAEEKKAVIEAKRGEDKLKAEEIAAKYRATG 182
           +L++IEEKLEKKKA+Y EKMKNK+A IHK AEEK+A++EAK+GE+ LKAEE+ AKYRATG
Sbjct: 122 QLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATG 181

Query: 183 TAPKKILGCF 189
             PK   GCF
Sbjct: 182 VVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of Tan0014004 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	1.7e-54	73.45	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	5.1e-51	62.44	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	6.5e-46	60.22	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	4.8e-41	56.32	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	2.9e-09	37.19	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of Tan0014004 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875881.1	8.4e-75	85.00	remorin-like isoform X2 [Benincasa hispida]	[more]
XP_008439225.1	9.3e-74	86.36	PREDICTED: remorin [Cucumis melo]	[more]
KAA0033640.1	9.3e-74	86.36	remorin [Cucumis melo var. makuwa]	[more]
XP_038875876.1	1.7e-72	82.44	remorin-like isoform X1 [Benincasa hispida]	[more]
XP_004140777.2	1.4e-69	87.03	remorin [Cucumis sativus]	[more]

BLAST of Tan0014004 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SRU5	4.5e-74	86.36	Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 S...	[more]
A0A1S3AXW2	4.5e-74	86.36	remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1	[more]
A0A0A0L9S3	1.6e-71	82.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1	[more]
A0A6J1HZY5	1.2e-66	78.50	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111467746 PE=3 SV=1	[more]
A0A6J1FZ79	2.0e-66	77.50	remorin OS=Cucurbita moschata OX=3662 GN=LOC111449242 PE=3 SV=1	[more]

BLAST of Tan0014004 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.2	2.1e-52	63.24	Remorin family protein	[more]
AT5G23750.1	3.6e-52	62.44	Remorin family protein	[more]
AT3G61260.1	4.6e-47	60.22	Remorin family protein	[more]
AT3G48940.1	5.1e-46	59.57	Remorin family protein	[more]
AT2G45820.1	3.4e-42	56.32	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..64
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 6..188
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 6..188
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 18..74 e-value: 6.5E-21 score: 74.1
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 78..183 e-value: 8.1E-32 score: 109.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014004.1	Tan0014004.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress