Tan0013980 (gene) Snake gourd v1

Overview


Name	Tan0013980
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	BEST Arabidopsis thaliana protein match is: reduced male fertility .
Location	LG06: 33965967 .. 33969996 (-)
RNA-Seq Expression	Tan0013980
Synteny	Tan0013980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAAAAAATGTCGAAGCGATCATCGCCAAATCCAGTTGTTGCTGTGGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCCGCTGGTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTTCGTTCTCTTTCTCTTTCTGTCTCCATCCTGATAATCGCTCTTCGTAGGTAATTTCAGTTTTGATACGAGTTTTGGGCGTAAAAACGTGTCTGCCTGTAGAGGTGAATGCCTATATGTTTTCTAAAGTATGGTGATAATGAGGAAATTTGAATTTTATTTTCTAGAAGTGATTTCAATTACTTAGTTAAAAAATTGAGATGTGTAGTTATTTCCTCGACTTTAGCCTCTCTGAGCTCGATTGTGTAGTCGCGTTTGTTTACTACTGCCAAGGACTTTGAAGTAGAAAGAAATGAATAATTCGAGTTGTTTTTGACTTTCTGTGAGATTCCAAAGCTCAAAGTGAAGGTCTGCAGAGTTAAGTCTATCGGAGCATAAACTTGTTCGTTGGAGAAGACGATGAAGAAAAAACGTTTTGTCATGTGATTTTAGGATTTGCTAATAGAATGTGACAATGTTTGTTGGAGACCACTACGCTTTGATAATCACTTTCTGGAGATCTTAAAAATTTGATCGTAATTACATTTTGTAATATAGTACAGCCGATTCTTCAGTATAGTTTTGAAGTGTTTATTTGTCACAAAGATCGAAGCAGTTTCAGGACTCTTTCTATCTGAAGCTAGTTCTGTATTTACATTTTTTACTTTTAATCACATTAAGTATTCCGAGTCCCCTAGCTTTCTTTTTAATTTCATCTTTTACTTTTAAAATTTCGAAAATGTGATTGTTCTATCTTTTGCATATTCGATCTTAAATCAGTTATTATTTCAGTAATCGAAAGCTCATTTGTTTATTACGCCATTAGTTTTACTTAAGTTTGGTTGATCGGGATTAAGACCGATGGATCATAGAAATTATAAATTGTTTCTATCAATTTGAATATTTCGTCGGCAACAAAGCTTTAGCTTTCCGTATGACTTAATTTCCGCGAATGAACATGAAAGGTACGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTCATGGAGGACAGCATATGGAAGTATGTTTGCTTGCGTGATCTTCAGGTCCCTGCTCCACAACACACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGGTAAGGATCGGGTTCGAGTTCTCCGAGTTGTATTCCTGCTCTGGTGAATACGTATTGCGTTTGCTTAACTATTCAATGACCCGTGTTCCAGACGGAAGTCACTCTTACATTTTCCGCCAGCAGGAGAAACATCTCGGTGAGTGATTATGATTCCACTTGACTCTAAGTAATTGGGTGTTAGGTTGTACTTAAAACGAAAACTAAATGTCAAGGACTTCCTTAGCCACATCTTATACCAAACAACTAGATATTCAAGTTCTATTCAACCATAAGTCAAGTCCTTATAGAGGGTGTAAAGCAGTATAAGATCTATCATCTTGAGATTCCAAGGAGCAGATTCCTAAAGCAACTATATTGCTACTTTCCATTCTCATGTATAGAATAGATATTTAGTGATCCCGATTCCAATATATTAATCGAACTGTAGTTTGCTTCTTTACCATGTTGTTTATTTTTTTTAATGAAACCAGATTGGATGCGGATTGGGGCATTTTTCCTGGATTCATCAGTAGCACTGCTATCAGAAAGGCTAAGCTCCCAAATGAAAATCCCAAAACAGGATTCGACGGATAACACATTGGAGTCTGGTTGTTGTGTCTTGCACAACGTTAAAACTGGGATCTGGATAGCTGGTAGATTCAAGCTTGCTAAATGTTTTTCTCATTTCTTTCAATTGTTGTCATAACTTGATACTCCTATTAACCTTTTTCTATAAATAAATTAATATTCTAAATGGACTAATGTGGCAGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGTAGGCATCCCAAGTAAACATTTCGTATGCCACTAAAACGTAGGAACCTCATTTCATTTCAATGTTGCAAGATCTTAACCTGCAGTTGTACCGTTCATGTCATTGGTATGCCATACTATGCTGAAAAGGATTTGGGATTCTTAGGCTTATTCACTTCCAAATTACATTGAAAATTTATTTAATCTTGATTTCCAATACATAGGAAAGTGGATGATACTGAGCACATACCCTAATCGTCTGCTAATCAGCATTAGTTCATTGTTGATAAAAGGGGTTTAACACATCCATACATGAGTTCAATCTACACGCATCATTGAGAAGCTCATCTGAAAAAAGAATATCAAAGCTGTAAACAGTGGTGTATATATTATACATCACTGTTTACTAAGAAAAGATTACATAAATAATAATATGATAAGTAATTGATTTACAGTTTGTTGGGTCTTGTTGACATTGCTAATATTGTTATGTAGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACATGAAAGACTCTTCAACCTCTGGTATAACACAGCCTCCCTATACTGAAAAAGTTACTCTCTTATTATTGCTAGATGTGCTTCTGAAAACAAATCTTGTAAGTTTTTCTCTTGCTGCACTATTGCACAATCAGTAATAGTTTATTCTATATTCTAAGTCTTATAATTTTGGAACCATCCAGGAAAAGTATTTTTAATACACTAGATAACTCGTGACAACACTGTACTAAATGAAATTCTTGAATTATTTATGTTTCTGGAAGAAAATACTGCGCACTTTTAGCTGCAATATGTATGCCATGGAAGGATGCTCATTCTCTCTCTTTAGCTAAAAGTGGTAGTTATATGGTGCAAGCTGTTACAGTATCAGTTTAGAACATGCTAAATTGCTAAATTTAGCTTAGCCTAATGGTTTAACATGTTAGAACACAAGATCTGAGTTCAAATTCCTGCAACCTCTGTTAAGTTTTTAGATGTTGAATGTTGTTATAAGACATTGTTCTACAACCAAAAAATATTGAGATACTTTGGGAGATTTAATTATGAAGTAATGATGAGATTTGTCCCCAATGAATTGACAGGAATACTGGATCTGAAAACATGGACAGGAAATCGAACTGATTGGCAACCAAAGGCAATGATTACTCTCAACGCAGTTGCTGTAAATACCTATTTACAAGACAATGAAGGTAAATGACCTCCCTCTTCTAGCATGAGTTTGATATGATATTGAAAACGGTGAAAATTGCTTTTAACCAATGAAAAAACACTTTTTTAAATTTTCTTAGGGTTCATTCGTAAATCCCTTCTGAACATTCAACATTAAGTAATTTTGATGGTGAGAAAAAGATCTTTAAGCACCCGTAAAACATGACAAATTATTCAATGAAATTTGATGATAACGTGATTGCTTTCATAATAATAACCGTTGGATGTAGATCCAATAATTTCCATACCATCTAATATTTCTAGACATAAATTCGAGATATTTCTCTCTCTCCATCAAACGGTGAAAAAACTGTCGGCCACAATGTGGTGGTCTCACCGAATAATTTCACCCTAAGCATAAGCCAAACTTCCAACTTCTTCTCACGTGGGTTATTAATATTAGATTGAGGTTTGATTTGGTATGGTGCAGGAGTTCATGTGAAATACCAAGCCATGAGAGCCGGAGCAAACGGAGAGGTGGTTTCTATAAGAATCTCTCAGCAACTTCTCTAA

mRNA sequence

ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAAAAAATGTCGAAGCGATCATCGCCAAATCCAGTTGTTGCTGTGGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCCGCTGGTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTCATGGAGGACAGCATATGGAAGTATGTTTGCTTGCGTGATCTTCAGGTCCCTGCTCCACAACACACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGACGGAAGTCACTCTTACATTTTCCGCCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCATTTTTCCTGGATTCATCAGTAGCACTGCTATCAGAAAGGCTAAGCTCCCAAATGAAAATCCCAAAACAGGATTCGACGGATAACACATTGGAGTCTGGTTGTTGTGTCTTGCACAACGTTAAAACTGGGATCTGGATAGCTGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACATGAAAGACTCTTCAACCTCTGGAATACTGGATCTGAAAACATGGACAGGAAATCGAACTGATTGGCAACCAAAGGCAATGATTACTCTCAACGCAGTTGCTGTAAATACCTATTTACAAGACAATGAAGGAGTTCATGTGAAATACCAAGCCATGAGAGCCGGAGCAAACGGAGAGGTGGTTTCTATAAGAATCTCTCAGCAACTTCTCTAA

Coding sequence (CDS)

ATGGGGAAGAAACTGAGCATTGCCTCAGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAAAAAATGTCGAAGCGATCATCGCCAAATCCAGTTGTTGCTGTGGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGCGCATTCCGCTGGTTCATCCTCTGCATCTTCGTCTTCCTGCTGGTACGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTCATGGAGGACAGCATATGGAAGTATGTTTGCTTGCGTGATCTTCAGGTCCCTGCTCCACAACACACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGACGGAAGTCACTCTTACATTTTCCGCCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCATTTTTCCTGGATTCATCAGTAGCACTGCTATCAGAAAGGCTAAGCTCCCAAATGAAAATCCCAAAACAGGATTCGACGGATAACACATTGGAGTCTGGTTGTTGTGTCTTGCACAACGTTAAAACTGGGATCTGGATAGCTGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAATGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTGTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACATGAAAGACTCTTCAACCTCTGGAATACTGGATCTGAAAACATGGACAGGAAATCGAACTGATTGGCAACCAAAGGCAATGATTACTCTCAACGCAGTTGCTGTAAATACCTATTTACAAGACAATGAAGGAGTTCATGTGAAATACCAAGCCATGAGAGCCGGAGCAAACGGAGAGGTGGTTTCTATAAGAATCTCTCAGCAACTTCTCTAA

Protein sequence

MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTWTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL

Homology

[Close]

BLAST of Tan0013980 vs. ExPASy Swiss-Prot
Match: Q9M365 (Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=2)

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-95
Identity = 165/303 (54.46%), Postives = 225/303 (74.26%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFY 112
           ++ I  C SPR +  T  S  S        WY+ D+WT +++FLDG+SL+ L AT++WFY
Sbjct: 65  LRGIRGCVSPRCSAQTYQSRFS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFY 124

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF
Sbjct: 125 KIAMEDTVWRFACLRDLQVPVPFPVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAF 184

Query: 173 FLDSSVALLSERLSSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA------------- 232
            LDS  +LL+E LS ++K P++ + +  L+ SG C+++++K+GIWIA             
Sbjct: 185 VLDSRTSLLTESLSGRLKFPREGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLS 244

Query: 233 ---GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTS 292
              GTMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH+K+SS S
Sbjct: 245 TCDGTMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYS 304

Query: 293 GILDLKTWTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQ 339
           GIL+LK+WTG   D QPKA+I  +AVAV+T LQ+NEG+ VKY  M+AG +G++VSIRISQ
Sbjct: 305 GILNLKSWTGESNDSQPKAVIAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQ 359

[Close]

BLAST of Tan0013980 vs. ExPASy Swiss-Prot
Match: Q9FGB8 (Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 342.4 bits (877), Expect = 5.7e-93
Identity = 161/303 (53.14%), Postives = 219/303 (72.28%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFY 112
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 173 FLDSSVALLSERLSSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA------------- 232
            LDS  + L+E LS ++K+P + + +  L+ SG C+++++K+GIWIA             
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 233 ---GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTS 292
              GTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KH+K SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 293 GILDLKTWTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQ 339
           GIL+LK+WTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  M+AG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

[Close]

BLAST of Tan0013980 vs. NCBI nr
Match: KAG6575300.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 644.4 bits (1661), Expect = 5.4e-181
Identity = 319/338 (94.38%), Postives = 330/338 (97.63%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60
           MGKKLSIASARDRVVTRSQSIAMEREK+S  SSPNPVVAVEPEGMVKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60

Query: 61  SPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120
           SPRS FLTAHS+ SSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180
           WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV L
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVL 180

Query: 181 LSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIAGTMQTLDARHIELFLNEGYQDG 240
           LSERL SQ+KIPKQDS DNTLESGCC+L NVKTGIWIAGTMQTLDARHIELFLNEGYQDG
Sbjct: 181 LSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIAGTMQTLDARHIELFLNEGYQDG 240

Query: 241 SWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTWTGNRTDWQPKAMITLNA 300
           SWEYQI+GSHDIRKPTESASGAIFDVKH+KDSSTSGILDLK+WTG+RTDWQPKAMITLNA
Sbjct: 241 SWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNA 300

Query: 301 VAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           VAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 VAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336

[Close]

BLAST of Tan0013980 vs. NCBI nr
Match: XP_038875515.1 (probable F-box protein At3g61730 [Benincasa hispida])

HSP 1 Score: 642.9 bits (1657), Expect = 1.6e-180
Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60
           MGKKLSIASARDRVVTRS SIAMER KMSKRSSPN VVA EPEG VKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSLSIAMERAKMSKRSSPNSVVAAEPEGTVKRMRRDIKPIHSCS 60

Query: 61  SPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120
           SPRSAFLTAHS+ SSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180
           WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180

Query: 181 LSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQTL 240
           LSERL SQMKIPKQDSTD TLESGCCVLHNVKTGIWIA                GTMQTL
Sbjct: 181 LSERLGSQMKIPKQDSTDKTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240

Query: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTWT 300
           DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKH+KDSSTSGILDLK+WT
Sbjct: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300

Query: 301 GNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           G+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 354

[Close]

BLAST of Tan0013980 vs. NCBI nr
Match: XP_004140675.1 (probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical protein Csa_005078 [Cucumis sativus])

HSP 1 Score: 642.5 bits (1656), Expect = 2.0e-180
Identity = 325/355 (91.55%), Postives = 332/355 (93.52%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSP-NPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER KM+KRSSP NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRSAFLTAHS+ SSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVA 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVA
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQT 240
           LLSERL SQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA                GTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTW 300
           LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKH++DSSTSG+LDLK+W
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of Tan0013980 vs. NCBI nr
Match: XP_023548391.1 (probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639.8 bits (1649), Expect = 1.3e-179
Identity = 322/354 (90.96%), Postives = 332/354 (93.79%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60
           MGKKLSIASARDRVVTRSQSIAMEREK+S  SSPNPVVAVEPEGMVKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60

Query: 61  SPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120
           SPRS FLTAHS+ SSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180
           WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV L
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVL 180

Query: 181 LSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQTL 240
           LSERL SQ+KIPKQDSTDNTLESGCCVLHNVKTGIWIA                GTMQTL
Sbjct: 181 LSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240

Query: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTWT 300
           DARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKH+KDSSTSGILDLK+WT
Sbjct: 241 DARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300

Query: 301 GNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           G+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352

[Close]

BLAST of Tan0013980 vs. NCBI nr
Match: TYK24589.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 630.2 bits (1624), Expect = 1.0e-176
Identity = 320/356 (89.89%), Postives = 328/356 (92.13%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSP--NPVVAVEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MER KMSKRSSP  NPVVA EPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP SAFLTAHS+ SSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQ 240
           ALLSERL SQMK+PKQ ST NTLESGCCVLHNVKTGIWIA                GTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKT 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKH++DSSTSGILDLK+
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           WTG+R DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of Tan0013980 vs. ExPASy TrEMBL
Match: A0A0A0KD88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 9.9e-181
Identity = 325/355 (91.55%), Postives = 332/355 (93.52%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSP-NPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER KM+KRSSP NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRSAFLTAHS+ SSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVA 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVA
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQT 240
           LLSERL SQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA                GTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTW 300
           LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKH++DSSTSG+LDLK+W
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of Tan0013980 vs. ExPASy TrEMBL
Match: A0A5D3DMQ8 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001350 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 5.1e-177
Identity = 320/356 (89.89%), Postives = 328/356 (92.13%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSP--NPVVAVEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MER KMSKRSSP  NPVVA EPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP SAFLTAHS+ SSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTMQ 240
           ALLSERL SQMK+PKQ ST NTLESGCCVLHNVKTGIWIA                GTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKT 300
           TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKH++DSSTSGILDLK+
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           WTG+R DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of Tan0013980 vs. ExPASy TrEMBL
Match: A0A1S3CBL0 (probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.8e-167
Identity = 300/334 (89.82%), Postives = 307/334 (91.92%), Query Frame = 0


Query: 23  MEREKMSKRSSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSAFLTAHSAGSSSASSS 82
           MER KMSKRSSP  NPVVA EPEGMVKRMRRDIKPIHSCSSP SAFLTAHS+ SSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLSSQMKIPKQDSTDNT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERL SQMK+PKQ ST NT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTWTGNRTDWQPKAMITLNAVAVN 322
           QIVGSHDIRKPTESASGAIFDVKH++DSSTSGILDLK+WTG+R DWQPKAMITL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]

BLAST of Tan0013980 vs. ExPASy TrEMBL
Match: A0A6J1DCT6 (probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.5e-160
Identity = 297/357 (83.19%), Postives = 313/357 (87.68%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKMSKRSSPNPVVAVEPEG-MVKRMRRDIKP--IH 60
           MGKKLSI+SARDRVVTRSQS AMERE++SKRS   P+ A EPEG M KR+RRD+K   IH
Sbjct: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRS---PIAAAEPEGVMAKRIRRDVKHPIIH 60

Query: 61  SCSSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME 120
            CSSPRSAFLT        ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME
Sbjct: 61  PCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME 120

Query: 121 DSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSS 180
           DSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF +DSS
Sbjct: 121 DSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSS 180

Query: 181 VALLSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIA----------------GTM 240
           VALLSERL SQ+KIPKQDS DN LESGCCVLHNVKTGIWIA                GTM
Sbjct: 181 VALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTM 240

Query: 241 QTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLK 300
           QTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKH++DSSTSGILD++
Sbjct: 241 QTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQ 300

Query: 301 TWTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           TW+G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Sbjct: 301 TWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 346

[Close]

BLAST of Tan0013980 vs. ExPASy TrEMBL
Match: A0A6J1EVC3 (probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.6e-138
Identity = 245/271 (90.41%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 84  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 143
           YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK
Sbjct: 11  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 70

Query: 144 LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLSSQMKIPKQDSTDNTLES 203
           LYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV LLSERL SQ+KIPKQDS DNTLES
Sbjct: 71  LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLES 130

Query: 204 GCCVLHNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIV 263
           GCCVLHNVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQI+
Sbjct: 131 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIL 190

Query: 264 GSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTWTGNRTDWQPKAMITLNAVAVNTYL 323
           GSHDIRKPTESASGAIFDVKH+KDSSTSGILDLK+WTG+RTDWQPKAMITLNAVAVNTYL
Sbjct: 191 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL 250

Query: 324 QDNEGVHVKYQAMRAGANGEVVSIRISQQLL 339
           QDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 251 QDNEGVHVKYQAMKAGANGEVVSIRISQQLL 281

[Close]

BLAST of Tan0013980 vs. TAIR 10
Match: AT5G36000.1 (BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 342.4 bits (877), Expect = 4.1e-94
Identity = 161/303 (53.14%), Postives = 219/303 (72.28%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFY 112
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 173 FLDSSVALLSERLSSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA------------- 232
            LDS  + L+E LS ++K+P + + +  L+ SG C+++++K+GIWIA             
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 233 ---GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTS 292
              GTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KH+K SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 293 GILDLKTWTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQ 339
           GIL+LK+WTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  M+AG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

[Close]

BLAST of Tan0013980 vs. TAIR 10
Match: AT3G61730.1 (reduced male fertility )

HSP 1 Score: 333.2 bits (853), Expect = 2.5e-91
Identity = 161/303 (53.14%), Postives = 220/303 (72.61%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTAHSAGSSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFY 112
           ++ I  C SPR +  T  S  S        WY+ D+WT +++FLDG+SL+ L AT++WFY
Sbjct: 65  LRGIRGCVSPRCSAQTYQSRFS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFY 124

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF
Sbjct: 125 KIAMEDTVWRFACLRDLQVPVPFPVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAF 184

Query: 173 FLDSSVALLSERLSSQMKIPKQDSTDNTLE-SGCCVLHNVKTGIWIA------------- 232
            LDS  +LL+E LS ++K P++ + +  L+ SG C+++++K+GIWIA             
Sbjct: 185 VLDSRTSLLTESLSGRLKFPREGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLS 244

Query: 233 ---GTMQTLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTS 292
              GTMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH+K+SS S
Sbjct: 245 TCDGTMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYS 304

Query: 293 GILDLKTWTGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQ 339
           GIL+LK+WTG   D QPKA+I  +AVAV+T LQ+NEG+ VKY  M+AG +G++VSIRISQ
Sbjct: 305 GILNLKSWTGESNDSQPKAVIAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQ 354

[Close]

BLAST of Tan0013980 vs. TAIR 10
Match: AT3G62500.1 (BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 159.8 bits (403), Expect = 3.7e-39
Identity = 79/152 (51.97%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 165 DWMRIGAFFLDSSVALLSERLSSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIAGTMQTL 224
           DWM IGAF LDS  +LL+E LS ++K+PK+ + +  L+    ++  V        TMQTL
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQKYLQLVRPVCD----LRTMQTL 237

Query: 225 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHMKDSSTSGILDLKTWT 284
           DARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH K+SS+SGIL+LK+WT
Sbjct: 238 DARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHHKESSSSGILNLKSWT 297

Query: 285 GNRTDWQPKAMITLNAVAVNTYLQDNEGVHVK 317
           G     QPKA+I  +AVAV+T L++NE   ++
Sbjct: 298 GQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

The following BLAST results are available for this feature:

BLAST of Tan0013980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M365	2.1e-95	54.46	Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=...	[more]
Q9FGB8	5.7e-93	53.14	Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE...	[more]

BLAST of Tan0013980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575300.1	5.4e-181	94.38	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038875515.1	1.6e-180	91.81	probable F-box protein At3g61730 [Benincasa hispida]	[more]
XP_004140675.1	2.0e-180	91.55	probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical prot...	[more]
XP_023548391.1	1.3e-179	90.96	probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]	[more]
TYK24589.1	1.0e-176	89.89	putative F-box protein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0013980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD88	9.9e-181	91.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1	[more]
A0A5D3DMQ8	5.1e-177	89.89	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CBL0	4.8e-167	89.82	probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV...	[more]
A0A6J1DCT6	2.5e-160	83.19	probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 ...	[more]
A0A6J1EVC3	1.6e-138	90.41	probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 P...	[more]

BLAST of Tan0013980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36000.1	4.1e-94	53.14	BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G617...	[more]
AT3G61730.1	2.5e-91	53.14	reduced male fertility	[more]
AT3G62500.1	3.7e-39	51.97	BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6174...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 84..165 e-value: 3.5E-6 score: 28.8
None	No IPR available	PANTHER	PTHR47149	F-BOX PROTEIN RMF	coord: 20..338
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 87..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013980.1	Tan0013980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0061458	reproductive system development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0005515	protein binding